##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1548012_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2047632 Sequences flagged as poor quality 0 Sequence length 51 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.914789864585043 31.0 31.0 33.0 30.0 33.0 2 31.254821178805567 31.0 31.0 33.0 30.0 34.0 3 31.340744821335083 31.0 31.0 34.0 30.0 34.0 4 35.25228361346179 37.0 35.0 37.0 33.0 37.0 5 35.11632510138541 37.0 35.0 37.0 32.0 37.0 6 35.17069033888902 37.0 35.0 37.0 32.0 37.0 7 35.594435914265844 36.0 35.0 37.0 35.0 37.0 8 35.71006606655884 37.0 35.0 37.0 35.0 37.0 9 37.547181329457636 39.0 37.0 39.0 35.0 39.0 10 36.69754233182525 39.0 37.0 39.0 32.0 39.0 11 36.23031140361159 38.0 35.0 39.0 31.0 39.0 12 35.85597705056377 37.0 35.0 39.0 31.0 39.0 13 35.643062815974744 37.0 35.0 39.0 30.0 39.0 14 36.6973176820835 39.0 35.0 40.0 31.0 41.0 15 36.902390175578425 39.0 35.0 41.0 31.0 41.0 16 37.00752771982466 39.0 35.0 41.0 31.0 41.0 17 36.94092248997867 38.0 35.0 41.0 31.0 41.0 18 36.82362065058565 38.0 35.0 40.0 31.0 41.0 19 36.76392877235753 38.0 35.0 40.0 31.0 41.0 20 36.61612731193886 38.0 35.0 40.0 31.0 41.0 21 36.502725099041236 38.0 35.0 40.0 31.0 41.0 22 36.370984630050714 38.0 35.0 40.0 30.0 41.0 23 36.31201749142424 38.0 35.0 40.0 30.0 41.0 24 36.217713436789424 38.0 34.0 40.0 30.0 41.0 25 36.06983188385413 38.0 34.0 40.0 30.0 41.0 26 35.8671455613118 38.0 34.0 40.0 29.0 41.0 27 35.898952546160636 38.0 34.0 40.0 30.0 41.0 28 35.94015282042867 38.0 34.0 40.0 30.0 41.0 29 35.953967802808315 38.0 34.0 40.0 30.0 41.0 30 35.885616653773724 38.0 34.0 40.0 30.0 41.0 31 35.790072141869246 38.0 34.0 40.0 29.0 41.0 32 35.625824366878426 38.0 34.0 40.0 29.0 41.0 33 35.429519562108815 38.0 34.0 40.0 27.0 41.0 34 35.249114098627096 38.0 34.0 40.0 27.0 41.0 35 35.060719894981126 38.0 34.0 40.0 25.0 41.0 36 34.97407053611196 38.0 34.0 40.0 25.0 41.0 37 34.924190967908295 38.0 34.0 40.0 25.0 41.0 38 34.87837658329231 38.0 34.0 40.0 25.0 41.0 39 34.84344696703314 38.0 34.0 40.0 24.0 41.0 40 34.697449541714526 38.0 33.0 40.0 24.0 41.0 41 34.639108980519936 38.0 33.0 40.0 24.0 41.0 42 34.613500375067396 37.0 33.0 40.0 24.0 41.0 43 34.57696109457168 37.0 33.0 40.0 24.0 41.0 44 34.4379107183322 37.0 33.0 40.0 23.0 41.0 45 34.335859177821014 37.0 33.0 40.0 23.0 41.0 46 34.2890778225775 37.0 33.0 40.0 23.0 41.0 47 34.26053363104308 37.0 33.0 40.0 23.0 41.0 48 34.17669581252881 37.0 33.0 40.0 23.0 41.0 49 34.04974135977559 37.0 33.0 40.0 23.0 41.0 50 33.949516319338635 36.0 33.0 40.0 23.0 41.0 51 33.632398302038645 36.0 32.0 40.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 4.0 13 12.0 14 18.0 15 80.0 16 173.0 17 450.0 18 999.0 19 1949.0 20 3471.0 21 5589.0 22 8420.0 23 13050.0 24 18805.0 25 27751.0 26 36195.0 27 41246.0 28 45276.0 29 51444.0 30 61564.0 31 74427.0 32 91381.0 33 114896.0 34 166100.0 35 200966.0 36 173192.0 37 216119.0 38 302048.0 39 391979.0 40 27.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 29.359670096970547 25.70701180680904 30.57697867585582 14.356339420364597 2 30.56335318064965 26.843690663166036 29.396834978160136 13.196121178024175 3 27.20479070457973 25.736216273236597 33.326300819678536 13.732692202505136 4 23.963192604921197 28.710871875415112 32.92539870445471 14.400536815208984 5 22.170634176453582 33.531659985778695 30.955025121701556 13.34268071606617 6 21.25215859099682 41.46404236698782 27.26700891566453 10.016790126350829 7 90.75209803324034 2.5255026293787166 5.908776577041188 0.8136227603397486 8 92.02976902099596 1.662798784156528 5.545918407213796 0.7615137876337154 9 87.50366276752854 4.869625010744118 6.3910409682989915 1.2356712534283503 10 39.000904459395045 41.997292482242905 11.084853137673175 7.916949920688873 11 27.260122912710877 25.60093805918251 31.261476671589428 15.877462356517185 12 28.970928369941472 24.474270767403517 29.73947467122999 16.815326191425022 13 21.904521906280035 30.23404596138369 30.775891371105747 17.085540761230533 14 17.26887448525907 33.878108957078226 30.805095837533308 18.047920720129397 15 16.609087961118014 28.19110074466506 38.87173085788852 16.328080436328403 16 20.606095235862696 26.491283590020082 36.86849004117928 16.03413113293795 17 20.990148620455237 25.735044187627466 30.28923165881369 22.985575533103606 18 21.534826570399368 27.180616438891363 33.05730717238254 18.22724981832673 19 24.65081616227916 27.728175765957946 29.31234714050181 18.308660931261088 20 26.104397665205465 28.728355485751344 28.768206396461864 16.399040452581325 21 23.502807145033874 28.032331981527932 31.252490681919408 17.21237019151879 22 23.053165803230268 25.423367089398873 30.80372840432265 20.719738703048204 23 19.714431108714848 29.84681817826641 30.642859654469163 19.795891058549582 24 19.382340186127195 28.134791798526297 35.1265266415059 17.35634137384061 25 19.426684091672723 29.806039366448662 32.569426537580966 18.197850004297646 26 19.200569242910838 33.828099971088555 28.473182681263037 18.49814810473757 27 18.46362041616853 32.80692038413152 31.37248294615439 17.356976253545557 28 17.144975268993647 30.794009861146925 34.834530814130666 17.226484055728765 29 18.092606483977587 28.66393961414942 34.44593559780273 18.797518304070262 30 19.46174898614595 30.32815466841698 31.893328488712815 18.316767856724255 31 22.901038858544894 29.234598795095994 29.30956343718012 18.55479890917899 32 23.91904404697719 29.192501386967972 29.556971174507918 17.331483391546918 33 22.978884877751472 29.484546051243584 29.429506864514714 18.10706220649023 34 19.54569961790009 30.240834290536583 30.45723059612274 19.75623549544059 35 19.24652476616892 29.96353837017589 31.191981762347922 19.597955101307267 36 23.194890488134586 29.439225407690444 29.06337662236183 18.302507481813137 37 19.907092680716065 32.375641716871 29.75031646311447 17.966949139298467 38 20.05458011986529 32.50935715011291 28.01499488189284 19.421067848128963 39 20.18575603428741 31.77548504809458 29.05058135446213 18.98817756315588 40 21.821743360135024 29.65454730146823 28.3806855919423 20.143023746454443 41 18.431534572618517 29.816490463130098 29.33608187408675 22.41589309016464 42 20.364254905178274 29.73434679669003 28.32540222071153 21.57599607742016 43 20.656104221852363 29.721111996686904 28.494866265031998 21.12791751642873 44 19.87559287997062 31.779880369128826 29.142785422380584 19.20174132851997 45 18.694716628769232 33.930217929784256 27.01100588386976 20.364059557576752 46 20.33373184244044 32.59491939957962 27.502646960000625 19.568701797979323 47 20.04012439735265 30.81203067738734 28.919893809043813 20.227951116216193 48 20.893744579104055 29.480492588511996 30.104042132570697 19.521720699813248 49 20.34755268524813 28.86885924814615 30.41327738578026 20.370310680825458 50 19.191290231838533 32.157584956671904 28.867003445931687 19.784121365557876 51 18.405944036819115 33.05882111629433 27.93231400954859 20.602920837337958 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1446.0 1 1685.5 2 1925.0 3 12646.5 4 23368.0 5 17818.0 6 12268.0 7 11552.5 8 10837.0 9 11708.0 10 12579.0 11 13306.0 12 14033.0 13 14398.5 14 14764.0 15 14414.5 16 14065.0 17 13880.5 18 13696.0 19 13734.0 20 13772.0 21 14782.5 22 15793.0 23 16774.0 24 17755.0 25 20682.5 26 28009.5 27 32409.0 28 38862.0 29 45315.0 30 50258.0 31 55201.0 32 62550.0 33 69899.0 34 76526.5 35 83154.0 36 90442.0 37 97730.0 38 106359.0 39 114988.0 40 128301.5 41 141615.0 42 157432.5 43 173250.0 44 173533.5 45 173817.0 46 169492.0 47 165167.0 48 156002.5 49 146838.0 50 139039.5 51 131241.0 52 119820.0 53 108399.0 54 97391.5 55 86384.0 56 77345.5 57 68307.0 58 61151.0 59 53995.0 60 48674.0 61 43353.0 62 35887.5 63 28422.0 64 22636.5 65 16851.0 66 12990.5 67 9130.0 68 7176.0 69 5222.0 70 3941.0 71 2660.0 72 2243.0 73 1826.0 74 1530.5 75 966.0 76 697.0 77 483.5 78 270.0 79 219.0 80 168.0 81 114.5 82 61.0 83 62.5 84 64.0 85 50.0 86 36.0 87 23.5 88 11.0 89 6.5 90 2.0 91 2.5 92 3.0 93 2.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2047632.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 23.264333963072573 #Duplication Level Percentage of deduplicated Percentage of total 1 74.03038717359458 17.222676506220687 2 7.72767253049125 3.595583090132211 3 3.1312411964202287 2.1853872273735333 4 1.796727996464905 1.6719872060224727 5 1.2144330983714298 1.4126488588160955 6 0.8771972215833445 1.2244445468636578 7 0.7368566810247646 1.1999735937196956 8 0.5681716739938961 1.0574508457721596 9 0.517125261569129 1.0827517307296928 >10 7.95490268078095 45.57575645182391 >50 1.3637230784617345 20.193282467478305 >100 0.08070060286900822 2.657560525688421 >500 0.0 0.0 >1k 6.456032810809686E-4 0.21072401065228463 >5k 0.0 0.0 >10k+ 2.152010936936562E-4 0.709772938706923 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 14177 0.6923607366948749 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.883690038053713E-5 0.0 0.0 0.011525508489806761 0.0 2 4.883690038053713E-5 0.0 0.0 0.04180438672573978 0.0 3 4.883690038053713E-5 0.0 0.0 0.0831204044476742 0.0 4 4.883690038053713E-5 0.0 0.0 0.13112707752174219 0.0 5 4.883690038053713E-5 0.0 0.0 0.2362240871406581 0.0 6 4.883690038053713E-5 0.0 0.0 0.4036858185455199 0.0 7 4.883690038053713E-5 0.0 0.0 0.5069758628503559 0.0 8 4.883690038053713E-5 0.0 0.0 0.6902607499785117 0.0 9 4.883690038053713E-5 0.0 0.0 0.7863717699274089 0.0 10 4.883690038053713E-5 0.0 0.0 0.9165709463419208 0.0 11 4.883690038053713E-5 0.0 0.0 1.0931163412175626 0.0 12 4.883690038053713E-5 0.0 0.0 1.2301038467849692 0.0 13 4.883690038053713E-5 0.0 0.0 1.3053126733709963 0.0 14 4.883690038053713E-5 0.0 0.0 1.3535146940465865 0.0 15 4.883690038053713E-5 0.0 0.0 1.400837650515327 0.0 16 4.883690038053713E-5 0.0 0.0 1.4779511162161951 0.0 17 4.883690038053713E-5 0.0 0.0 1.585782992256421 0.0 18 4.883690038053713E-5 0.0 0.0 1.6977660048289926 0.0 19 4.883690038053713E-5 0.0 0.0 1.7799585081694367 0.0 20 4.883690038053713E-5 0.0 0.0 1.8596114926900928 0.0 21 4.883690038053713E-5 0.0 0.0 1.9626085155926456 0.0 22 4.883690038053713E-5 0.0 0.0 2.0825519429272448 0.0 23 4.883690038053713E-5 0.0 0.0 2.2141673894527925 0.0 24 4.883690038053713E-5 0.0 0.0 2.316090000546973 0.0 25 4.883690038053713E-5 0.0 0.0 2.404631300936887 0.0 26 4.883690038053713E-5 0.0 0.0 2.4912191253115794 0.0 27 4.883690038053713E-5 0.0 0.0 2.587769677363901 0.0 28 4.883690038053713E-5 0.0 0.0 2.693208545285481 0.0 29 4.883690038053713E-5 0.0 0.0 2.809049672988115 0.0 30 4.883690038053713E-5 0.0 0.0 2.9457441571532383 0.0 31 4.883690038053713E-5 0.0 0.0 3.075796822866609 0.0 32 4.883690038053713E-5 0.0 0.0 3.1965216406072967 0.0 33 4.883690038053713E-5 0.0 0.0 3.31866272845902 0.0 34 4.883690038053713E-5 0.0 0.0 3.4489107417739127 0.0 35 4.883690038053713E-5 0.0 0.0 3.597326082030365 0.0 36 4.883690038053713E-5 0.0 0.0 3.744569336677684 0.0 37 4.883690038053713E-5 0.0 0.0 3.8972334872672434 0.0 38 4.883690038053713E-5 0.0 0.0 4.050190659259085 0.0 39 4.883690038053713E-5 0.0 0.0 4.254182392148589 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCCGAAT 20 7.034579E-4 45.000004 26 CGCTATA 20 7.034579E-4 45.000004 42 TACCGCG 40 6.8193913E-9 45.000004 1 CGTTTTT 8770 0.0 42.819267 1 TATTGCG 150 0.0 40.5 1 AATCGCG 45 1.929584E-8 40.0 1 TAGTACG 90 0.0 40.0 1 ACGGGAC 880 0.0 38.863636 5 CGACGGT 70 0.0 38.57143 28 GCGATGC 240 0.0 38.437504 9 ACGGGAT 1205 0.0 38.27801 5 TTTAGCG 165 0.0 38.181816 1 AACGGGA 1015 0.0 38.12808 4 AGGGCGA 1595 0.0 38.087776 6 TTACGAG 130 0.0 38.07692 1 TCGAACG 65 9.094947E-12 38.07692 1 GTTAGCG 95 0.0 37.894737 1 TAAGGGA 3430 0.0 37.71866 4 AGGGATT 5150 0.0 37.6602 6 AAGGGAT 5055 0.0 37.566765 5 >>END_MODULE