##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1548011_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3115588 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.86530921289978 31.0 31.0 31.0 30.0 33.0 2 31.20210053447375 31.0 31.0 33.0 30.0 34.0 3 31.336657478459923 31.0 31.0 34.0 30.0 34.0 4 35.23285813143458 37.0 35.0 37.0 33.0 37.0 5 35.07211768693421 35.0 35.0 37.0 32.0 37.0 6 35.11683861922693 37.0 35.0 37.0 32.0 37.0 7 35.55696099741044 36.0 35.0 37.0 35.0 37.0 8 35.66541307772401 37.0 35.0 37.0 35.0 37.0 9 37.49067976895533 39.0 37.0 39.0 35.0 39.0 10 36.59125564740909 39.0 35.0 39.0 32.0 39.0 11 36.11280438877027 38.0 35.0 39.0 31.0 39.0 12 35.73053529542417 37.0 35.0 39.0 30.0 39.0 13 35.53536154331061 37.0 35.0 39.0 30.0 39.0 14 36.54914160665659 38.0 35.0 40.0 30.0 41.0 15 36.751061757844745 38.0 35.0 40.0 31.0 41.0 16 36.8441331138777 38.0 35.0 40.0 31.0 41.0 17 36.769854679116754 38.0 35.0 40.0 31.0 41.0 18 36.672994953119606 38.0 35.0 40.0 31.0 41.0 19 36.614056158901626 38.0 35.0 40.0 31.0 41.0 20 36.48943506009139 38.0 35.0 40.0 30.0 41.0 21 36.37776881924054 38.0 35.0 40.0 30.0 41.0 22 36.261934504818996 38.0 34.0 40.0 30.0 41.0 23 36.202229563087286 38.0 34.0 40.0 30.0 41.0 24 36.10377206485582 38.0 34.0 40.0 30.0 41.0 25 35.95614375199802 38.0 34.0 40.0 30.0 41.0 26 35.72985580891954 38.0 34.0 40.0 29.0 41.0 27 35.787400002824505 38.0 34.0 40.0 29.0 41.0 28 35.80924371258331 38.0 34.0 40.0 29.0 41.0 29 35.822743251033195 38.0 34.0 40.0 29.0 41.0 30 35.73827829610334 38.0 34.0 40.0 29.0 41.0 31 35.651269680073234 38.0 34.0 40.0 29.0 41.0 32 35.53748024449959 38.0 34.0 40.0 28.0 41.0 33 35.36918520677317 38.0 34.0 40.0 27.0 41.0 34 35.21743439761612 38.0 34.0 40.0 26.0 41.0 35 35.06757761295781 38.0 34.0 40.0 25.0 41.0 36 34.99120037694329 38.0 34.0 40.0 25.0 41.0 37 34.95414605525506 38.0 34.0 40.0 25.0 41.0 38 34.8792118855253 38.0 33.0 40.0 25.0 41.0 39 34.86400063166246 38.0 33.0 40.0 25.0 41.0 40 34.721663775826585 38.0 33.0 40.0 24.0 41.0 41 34.66592052607726 37.0 33.0 40.0 24.0 41.0 42 34.62944651218326 37.0 33.0 40.0 24.0 41.0 43 34.59872325865936 37.0 33.0 40.0 24.0 41.0 44 34.42748046275695 37.0 33.0 40.0 23.0 41.0 45 34.31081901714861 37.0 33.0 40.0 23.0 41.0 46 34.274745569696634 37.0 33.0 40.0 23.0 41.0 47 34.2399104117746 37.0 33.0 40.0 23.0 41.0 48 34.170143805920425 37.0 33.0 40.0 23.0 41.0 49 34.05541393791477 36.0 33.0 40.0 23.0 41.0 50 33.951135066639104 36.0 33.0 40.0 23.0 41.0 51 33.632258501444994 36.0 32.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 3.0 13 9.0 14 33.0 15 115.0 16 323.0 17 807.0 18 1699.0 19 3237.0 20 5513.0 21 8924.0 22 13554.0 23 19687.0 24 29089.0 25 40742.0 26 53892.0 27 62716.0 28 70621.0 29 82637.0 30 98407.0 31 118429.0 32 143312.0 33 180142.0 34 257907.0 35 299939.0 36 263324.0 37 325849.0 38 453433.0 39 581196.0 40 49.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.485256715586274 25.756422222707236 30.0870975238061 13.67122353790039 2 29.613896317484855 26.725837947764596 30.222577568022473 13.43768816672808 3 27.632633069584294 26.721023447259395 32.256607741460044 13.38973574169627 4 24.2786915343107 29.040842370685727 32.21693625729718 14.463529837706398 5 22.414677422046818 33.847190321698505 30.195584268523305 13.542547987731368 6 21.30724601584035 41.922616212413196 26.58727662322489 10.182861148521564 7 91.56842945858054 2.3438593292823056 5.223989821503999 0.8637213906331647 8 92.71501880222931 1.6472652995197055 4.752874898735006 0.8848409995159823 9 88.06270277071295 4.863897280384954 5.6927295906904245 1.3806703582116764 10 40.473900913728 40.92299752085321 10.454495267025036 8.148606298393753 11 27.69778930975469 24.926947979001074 30.44593829479379 16.92932441645044 12 28.982875784603102 23.895200520736378 29.140470434473364 17.98145326018716 13 22.888969915149243 29.013913264526632 30.043927502609456 18.053189317714665 14 17.89607611789492 32.34381439394426 30.885502190918697 18.874607297242125 15 17.398481442347318 28.295493499140452 37.66971114280835 16.636313915703873 16 21.593933472590084 26.448939975375435 35.47417052575629 16.48295602627819 17 21.360879551468294 25.22804684059638 30.31713435794463 23.09393924999069 18 22.12166692130025 26.461746546719272 32.515820448660094 18.900766083320388 19 24.537840048170683 27.50565864292711 29.057372155753587 18.89912915314862 20 26.24050420017024 28.05001816671524 28.646438489299612 17.063039143814905 21 23.948673573014148 27.382632106684195 30.920519657926533 17.748174662375128 22 23.732181533630246 24.767844785639177 30.691413627219006 20.808560053511567 23 20.305476847388036 28.364982789765524 30.770403532174345 20.55913683067209 24 20.546811709378776 27.394796744627335 34.35528060834744 17.70311093764644 25 20.66380407165517 28.659951187384213 31.445460696343673 19.23078404461694 26 19.62579776273371 32.52904427671438 28.296488495911525 19.548669464640383 27 18.643414982982346 31.78626313877188 30.781348496656168 18.788973381589607 28 17.702725777606023 30.23984557650113 33.53472923891092 18.522699406981925 29 19.207834925542144 27.639598046981824 33.17267880091976 19.979888226556273 30 19.961111674585986 29.092999459492074 31.68374637468112 19.26214249124082 31 23.506670329966607 28.218140524356876 29.344187999183465 18.931001146493053 32 24.09265923478971 28.344793984313714 29.219267759408496 18.34327902148808 33 23.17228722154534 28.977868704077693 29.172727587858216 18.67711648651876 34 20.25258153517089 28.892170595085105 30.26606855591946 20.58917931382455 35 19.87419389213208 29.264941320867845 30.8863367043396 19.97452808266048 36 23.333605085139627 28.901927982775643 29.13803108755073 18.626435844534 37 20.84377010053961 30.74764699311976 29.756084565738472 18.652498340602158 38 20.16852035635007 31.390382810564173 27.990896100511364 20.450200732574398 39 20.29405043285569 30.55696067644374 29.240772528331732 19.908216362368837 40 22.31498516491911 28.583143855991228 28.31767229813441 20.78419868095525 41 18.792183048593074 28.752389597084083 29.676516920722506 22.778910433600334 42 20.295719459697494 28.568925031165865 28.801561695577206 22.33379381355943 43 20.69484155157871 28.18450321416054 29.11463261509545 22.006022619165307 44 19.976325496182422 30.071819508869595 28.976937900646682 20.9749170943013 45 19.228537277714512 31.751309865104115 27.888989173151263 21.13116368403011 46 21.289079300600722 30.7733243291475 28.27938097078304 19.658215399468737 47 20.265259719834585 29.509004399811527 29.294759127330057 20.930976753023828 48 20.961211816196492 28.277936620631483 30.395065072788828 20.365786490383194 49 20.93421851669733 27.869217624409902 30.115021626736272 21.081542232156497 50 19.61905746202643 30.473477237683543 29.383955773356423 20.5235095269336 51 19.22288826378841 30.99032991525195 28.268596489651394 21.51818533130825 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1987.0 1 2431.0 2 2875.0 3 16422.0 4 29969.0 5 22891.0 6 15813.0 7 14691.0 8 13569.0 9 14230.0 10 14891.0 11 15724.0 12 16557.0 13 16645.5 14 16734.0 15 16193.0 16 15652.0 17 15408.5 18 15165.0 19 15535.5 20 15906.0 21 16446.5 22 16987.0 23 20884.0 24 24781.0 25 28753.5 26 37958.5 27 43191.0 28 52114.5 29 61038.0 30 72761.5 31 84485.0 32 95902.0 33 107319.0 34 118062.5 35 128806.0 36 139174.0 37 149542.0 38 161514.0 39 173486.0 40 193123.0 41 212760.0 42 227116.0 43 241472.0 44 248719.0 45 255966.0 46 250906.0 47 245846.0 48 240003.5 49 234161.0 50 217912.5 51 201664.0 52 186880.5 53 172097.0 54 158535.5 55 144974.0 56 130953.5 57 116933.0 58 105088.0 59 93243.0 60 84954.0 61 76665.0 62 65699.5 63 54734.0 64 45666.0 65 36598.0 66 28905.5 67 21213.0 68 15979.5 69 10746.0 70 8539.0 71 6332.0 72 5006.5 73 3681.0 74 2953.0 75 1892.5 76 1560.0 77 1048.0 78 536.0 79 425.0 80 314.0 81 249.5 82 185.0 83 153.0 84 121.0 85 78.5 86 36.0 87 31.0 88 26.0 89 21.5 90 17.0 91 9.0 92 1.0 93 1.0 94 1.0 95 1.5 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3115588.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.97708705423148 #Duplication Level Percentage of deduplicated Percentage of total 1 76.59718396581214 15.301886121940125 2 7.19568268199188 2.8749755870555527 3 2.594329724436092 1.5548145225732053 4 1.5061073134468996 1.2035054765497366 5 0.9392431275112949 0.9381670861690888 6 0.7281281223654562 0.8727527332277298 7 0.564406318407539 0.7892635909749989 8 0.4511091943420693 0.7209478117068597 9 0.3829133452416715 0.6884543908907877 >10 6.273056103530301 31.997721598605317 >50 2.4438819028685077 33.90966601778832 >100 0.32263482257265763 8.285132252617284 >500 6.616887367718445E-4 0.10498883770227027 >1k 4.962665525788833E-4 0.1876712651278542 >5k 0.0 0.0 >10k+ 1.6542218419296113E-4 0.5700527070708725 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 17250 0.5536675580981824 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.015534788296783786 0.0 2 0.0 0.0 0.0 0.05828755278297387 0.0 3 0.0 0.0 0.0 0.09086567286817128 0.0 4 0.0 0.0 0.0 0.15284434270513303 0.0 5 0.0 0.0 0.0 0.2840234331368589 0.0 6 0.0 0.0 0.0 0.49538000531520854 0.0 7 0.0 0.0 0.0 0.6231889453932934 0.0 8 0.0 0.0 0.0 0.8740886150543653 0.0 9 0.0 0.0 0.0 0.99345613091333 0.0 10 0.0 0.0 0.0 1.1544209311372364 0.0 11 0.0 0.0 0.0 1.3611555828305926 0.0 12 0.0 0.0 0.0 1.5127160587343385 0.0 13 0.0 0.0 0.0 1.591705963689679 0.0 14 0.0 0.0 0.0 1.6407817721727007 0.0 15 0.0 0.0 0.0 1.6932919243494327 0.0 16 0.0 0.0 0.0 1.7907695112447475 0.0 17 0.0 0.0 0.0 1.9188031280130748 0.0 18 0.0 0.0 0.0 2.0538017221789273 0.0 19 0.0 0.0 0.0 2.1514718890944504 0.0 20 0.0 0.0 0.0 2.2486285092894183 0.0 21 0.0 0.0 0.0 2.371173595481816 0.0 22 0.0 0.0 0.0 2.5273559918705555 0.0 23 0.0 0.0 0.0 2.6863307985523117 0.0 24 0.0 0.0 0.0 2.814139738630397 0.0 25 0.0 0.0 0.0 2.9259324403611773 0.0 26 0.0 0.0 0.0 3.039843522314247 0.0 27 0.0 0.0 0.0 3.1622281251564712 0.0 28 3.209667003467724E-5 0.0 0.0 3.2934072155881973 0.0 29 3.209667003467724E-5 0.0 0.0 3.4373928773637594 0.0 30 3.209667003467724E-5 0.0 0.0 3.6123197290527504 0.0 31 3.209667003467724E-5 0.0 0.0 3.7713908257446107 0.0 32 3.209667003467724E-5 0.0 0.0 3.923208075008634 0.0 33 3.209667003467724E-5 0.0 0.0 4.073356297430854 0.0 34 3.209667003467724E-5 0.0 0.0 4.2339038409443095 0.0 35 3.209667003467724E-5 0.0 0.0 4.420385493845784 0.0 36 3.209667003467724E-5 0.0 0.0 4.596146858955677 0.0 37 3.209667003467724E-5 0.0 0.0 4.782853188547395 0.0 38 3.209667003467724E-5 0.0 0.0 4.984580759715341 0.0 39 6.419334006935449E-5 0.0 0.0 5.256279071558884 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGATCGA 20 7.035147E-4 45.0 10 CGTTTTT 10505 0.0 41.72299 1 TATCACG 85 0.0 39.705883 1 CGAGGGA 2645 0.0 39.64083 4 CGTAAGG 500 0.0 39.600002 2 GCGTAAG 190 0.0 39.07895 1 TACGGGA 1495 0.0 38.82943 4 AGGGATT 7990 0.0 38.494995 6 GCGCGAC 165 0.0 38.181816 9 TAGGGAC 4485 0.0 38.177254 5 AAGGGAC 4660 0.0 38.143776 5 GGGCGAT 5215 0.0 38.010548 7 TAAGGGA 5135 0.0 37.98929 4 ACGGGAC 1175 0.0 37.914898 5 ATAGGGA 5530 0.0 37.839058 4 TAACGGG 1025 0.0 37.7561 3 GGCGATT 1630 0.0 37.684048 8 AAGGGAT 7455 0.0 37.484913 5 TTAGGGA 5525 0.0 37.42534 4 GGACCGA 2465 0.0 37.423935 8 >>END_MODULE