##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1548010_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3333396 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.91138466596828 31.0 31.0 31.0 30.0 33.0 2 31.259802615710825 31.0 31.0 33.0 30.0 34.0 3 31.407780833720327 31.0 31.0 34.0 30.0 34.0 4 35.30798230993258 37.0 35.0 37.0 33.0 37.0 5 35.159737696931295 37.0 35.0 37.0 32.0 37.0 6 35.19863466566829 37.0 35.0 37.0 32.0 37.0 7 35.558492900333476 36.0 35.0 37.0 35.0 37.0 8 35.65112665881881 37.0 35.0 37.0 35.0 37.0 9 37.4879495265489 39.0 37.0 39.0 35.0 39.0 10 36.62784829645203 39.0 37.0 39.0 32.0 39.0 11 36.2607517978662 38.0 35.0 39.0 31.0 39.0 12 35.91779854538735 37.0 35.0 39.0 31.0 39.0 13 35.76647389029086 37.0 35.0 39.0 30.0 39.0 14 36.79284309454982 39.0 35.0 40.0 31.0 41.0 15 36.9436496593864 39.0 35.0 40.0 31.0 41.0 16 37.004740810872754 39.0 35.0 41.0 31.0 41.0 17 36.93161838557435 38.0 35.0 40.0 31.0 41.0 18 36.82636866426911 38.0 35.0 40.0 31.0 41.0 19 36.77594291227325 38.0 35.0 40.0 31.0 41.0 20 36.663948417769745 38.0 35.0 40.0 31.0 41.0 21 36.556536037122505 38.0 35.0 40.0 30.0 41.0 22 36.45426285985823 38.0 35.0 40.0 30.0 41.0 23 36.36601561890637 38.0 35.0 40.0 30.0 41.0 24 36.263654543294585 38.0 35.0 40.0 30.0 41.0 25 36.09811495543884 38.0 34.0 40.0 30.0 41.0 26 35.88660363185172 38.0 34.0 40.0 29.0 41.0 27 35.98169404415197 38.0 34.0 40.0 30.0 41.0 28 36.01402683629548 38.0 34.0 40.0 30.0 41.0 29 36.0165743884015 38.0 34.0 40.0 30.0 41.0 30 35.93411043872375 38.0 34.0 40.0 29.0 41.0 31 35.87196240710674 38.0 34.0 40.0 29.0 41.0 32 35.75935892405223 38.0 34.0 40.0 29.0 41.0 33 35.62816179055834 38.0 34.0 40.0 28.0 41.0 34 35.46590384100779 38.0 34.0 40.0 27.0 41.0 35 35.31585896185152 38.0 34.0 40.0 26.0 41.0 36 35.25705346739481 38.0 34.0 40.0 26.0 41.0 37 35.22325610278527 38.0 34.0 40.0 26.0 41.0 38 35.164717303314696 38.0 34.0 40.0 26.0 41.0 39 35.12746790360341 38.0 34.0 40.0 26.0 41.0 40 34.97993457722995 38.0 34.0 40.0 25.0 41.0 41 34.89908309723777 38.0 34.0 40.0 25.0 41.0 42 34.856303901486655 38.0 33.0 40.0 25.0 41.0 43 34.80718102499673 38.0 33.0 40.0 24.0 41.0 44 34.670277398784904 37.0 33.0 40.0 24.0 41.0 45 34.565036377316105 37.0 33.0 40.0 24.0 41.0 46 34.508513239951085 37.0 33.0 40.0 24.0 41.0 47 34.45345887497315 37.0 33.0 40.0 24.0 41.0 48 34.37211270428116 37.0 33.0 40.0 23.0 41.0 49 34.23566896942337 37.0 33.0 40.0 24.0 41.0 50 34.13368348675045 37.0 33.0 40.0 24.0 41.0 51 33.80265951000121 36.0 32.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 2.0 11 1.0 12 3.0 13 11.0 14 31.0 15 107.0 16 296.0 17 707.0 18 1588.0 19 3042.0 20 5304.0 21 8215.0 22 12882.0 23 18769.0 24 27540.0 25 39129.0 26 51984.0 27 61763.0 28 70445.0 29 83412.0 30 99865.0 31 122459.0 32 150357.0 33 189325.0 34 268280.0 35 308071.0 36 294106.0 37 369963.0 38 515490.0 39 630188.0 40 60.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.076685758307743 25.12275769215539 29.835129099572928 13.96542744996394 2 29.729681081995658 26.55907068947104 30.354299339172425 13.356948889360881 3 28.083792024709936 26.28001593570041 32.13752581451469 13.498666225074968 4 24.947950978521604 28.872357199684647 31.856731093455444 14.322960728338307 5 22.669493813516304 33.28407425940392 30.253051242636637 13.793380684443132 6 21.404597593565242 41.552548812082335 26.74578717920103 10.297066415151395 7 91.45103072062246 2.5867613688862647 4.996646063054015 0.9655618474372681 8 92.33622407898731 1.9026242306644636 4.6385727948314575 1.1225788955167644 9 87.33411811857937 5.023705554335579 5.8439501337374855 1.798226193347565 10 36.78245848978039 40.677975254065224 11.960025151527152 10.579541104627232 11 28.901066659946796 25.36275318024021 28.07752214258372 17.658658017229275 12 29.562344227928516 23.161964555066366 28.137611012912956 19.138080204092166 13 24.55825830474387 26.308215405550378 29.345478305007866 19.788047984697887 14 19.687519874626357 29.52388495096292 29.879318268816547 20.909276905594172 15 19.491353562553023 27.175919092721056 34.59066969540972 18.742057649316195 16 23.699104456836213 26.170847988057826 32.468059600479506 17.661987954626454 17 23.246142972512114 25.792105108423964 28.59363243971013 22.368119479353787 18 23.47776861794998 26.082019658030433 30.892969212178812 19.547242511840775 19 25.592308864593345 27.308216605527818 28.01086339576816 19.08861113411068 20 27.19004882708205 27.667489851190798 27.23660795177051 17.905853369956645 21 25.53548993278926 26.44564282191495 29.591383681986777 18.42748356330901 22 24.998770023123566 23.854531534807148 29.988306219843068 21.158392222226222 23 22.43792816695046 27.331526167308056 29.635962843898533 20.59458282184295 24 22.085494792697897 26.384923963429486 32.05787731190654 19.47170393196608 25 22.068815106276002 27.972674113726665 29.557274323242723 20.401236456754614 26 21.55744472003926 30.688103063662403 27.475853453955068 20.278598762343268 27 20.27616880802641 29.611603301857926 29.993646119452954 20.11858177066271 28 19.190549217674707 28.98194513943138 31.643945093832237 20.183560549061678 29 20.61111251108479 26.761356886490535 31.467578409525903 21.159952192898775 30 21.784930443307665 27.23222803411296 30.810920754689814 20.171920767889564 31 23.647625424642015 27.141869732849024 28.585592590859292 20.62491225164967 32 24.239514297131215 27.159509401223257 28.970965345851496 19.63001095579403 33 23.94785978023613 27.58181146194452 28.141990930570504 20.32833782724885 34 20.987455435837806 27.800807344821916 30.035915324791894 21.17582189454838 35 20.95790599136736 28.23993908914512 30.028895456765415 20.773259462722102 36 23.2766523989349 27.95170450795525 28.471084743606824 20.300558349503028 37 21.726131548726883 29.206190923610638 28.80746841959371 20.260209108068768 38 21.448066776344604 29.422096864578943 28.007743454423057 21.122092904653393 39 21.391757834952703 28.65111135910645 28.737689731433047 21.2194410745078 40 22.938438757351364 27.289196963097094 28.511163990116984 21.26120028943456 41 20.41944611441305 27.054961366726303 29.45158631017737 23.074006208683276 42 21.746771160702178 27.64271031704604 28.220679451226317 22.389839071025463 43 21.83784944843037 27.205018545651345 28.33824724095187 22.618884764966417 44 21.121762910857274 28.389486277657983 28.611092111468306 21.87765870001644 45 20.75834974302483 28.82231814041896 27.924795013853736 22.49453710270247 46 21.72295160850976 28.94480583765025 28.076892154427497 21.25535039941249 47 21.01019500833384 27.984463892078832 29.29942917073159 21.705911928855738 48 21.888908488520418 27.079740900871062 29.577733938601952 21.453616672006568 49 21.624613457267003 26.790486338856827 29.437126582020255 22.147773621855908 50 20.867127697999276 28.480744562002236 29.15330191792394 21.498825822074544 51 20.29062853618352 28.635541651816947 28.529493645519466 22.54433616648007 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1848.0 1 2338.0 2 2828.0 3 15478.5 4 28129.0 5 21514.0 6 14899.0 7 13939.5 8 12980.0 9 13166.0 10 13352.0 11 13664.5 12 13977.0 13 14013.5 14 14050.0 15 13576.5 16 13103.0 17 12718.5 18 12334.0 19 13065.0 20 13796.0 21 14741.5 22 15687.0 23 18165.0 24 20643.0 25 23751.5 26 33051.5 27 39243.0 28 48900.0 29 58557.0 30 66045.0 31 73533.0 32 84953.0 33 96373.0 34 108500.5 35 120628.0 36 128861.5 37 137095.0 38 151437.0 39 165779.0 40 183126.0 41 200473.0 42 216548.0 43 232623.0 44 241775.0 45 250927.0 46 254840.5 47 258754.0 48 256895.5 49 255037.0 50 244531.5 51 234026.0 52 222236.0 53 210446.0 54 193493.5 55 176541.0 56 164176.5 57 151812.0 58 141855.5 59 131899.0 60 121676.5 61 111454.0 62 95732.5 63 80011.0 64 67006.0 65 54001.0 66 44345.0 67 34689.0 68 28443.5 69 22198.0 70 17510.0 71 12822.0 72 10547.0 73 8272.0 74 6704.0 75 4278.0 76 3420.0 77 2472.5 78 1525.0 79 1122.0 80 719.0 81 606.5 82 494.0 83 340.5 84 187.0 85 165.5 86 144.0 87 90.5 88 37.0 89 35.5 90 34.0 91 24.5 92 15.0 93 10.0 94 5.0 95 3.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3333396.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.93890134232022 #Duplication Level Percentage of deduplicated Percentage of total 1 75.85116868093777 15.123889690289074 2 6.655811140484412 2.6541912336646902 3 2.3590794551929712 1.4111235754736156 4 1.4041767650241364 1.1199096793997847 5 0.963501020481287 0.9605575895300619 6 0.7291848414656729 0.8723486768579677 7 0.5890497426593546 0.8221503293222792 8 0.5267418654254462 0.840212327007015 9 0.44856975335130483 0.8049589251498522 >10 8.104002096082741 41.80558540222853 >50 2.2481070393862184 29.528312088166402 >100 0.11859660452121751 3.302010990502831 >500 0.0013922272990189886 0.16239297415316367 >1k 4.640757663396611E-4 0.1258429885175509 >5k 0.0 0.0 >10k+ 1.5469192211322038E-4 0.4665135297372444 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 15125 0.4537414696603704 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.02456953809268386 0.0 2 0.0 0.0 0.0 0.0749385911544863 0.0 3 0.0 0.0 0.0 0.11723779592943653 0.0 4 0.0 0.0 0.0 0.18350655007685857 0.0 5 0.0 0.0 0.0 0.33164376509721616 0.0 6 0.0 0.0 0.0 0.5944988234221197 0.0 7 0.0 0.0 0.0 0.7342061969234979 0.0 8 0.0 0.0 0.0 1.0241207465299653 0.0 9 0.0 0.0 0.0 1.1805078064532386 0.0 10 0.0 0.0 0.0 1.398033716966121 0.0 11 0.0 0.0 0.0 1.6414491407561538 0.0 12 0.0 0.0 0.0 1.8290356141304545 0.0 13 0.0 0.0 0.0 1.940903511013993 0.0 14 0.0 0.0 0.0 2.0107721974826873 0.0 15 0.0 0.0 0.0 2.0780909318904803 0.0 16 0.0 0.0 0.0 2.1817089838711032 0.0 17 0.0 0.0 0.0 2.3029067053539394 0.0 18 0.0 0.0 0.0 2.4441740495278688 0.0 19 0.0 0.0 0.0 2.5486920845888097 0.0 20 0.0 0.0 0.0 2.6554900767865566 0.0 21 0.0 0.0 0.0 2.788387578313528 0.0 22 0.0 0.0 0.0 2.949484549690466 0.0 23 0.0 0.0 0.0 3.124621257120366 0.0 24 0.0 0.0 0.0 3.260488702812387 0.0 25 0.0 0.0 0.0 3.3895762759660117 0.0 26 0.0 0.0 0.0 3.509334024520339 0.0 27 0.0 0.0 0.0 3.6392015830102395 0.0 28 0.0 0.0 0.0 3.7694591341682777 0.0 29 0.0 0.0 0.0 3.9176563480606563 0.0 30 0.0 0.0 0.0 4.088323139524977 0.0 31 0.0 0.0 0.0 4.243630219751869 0.0 32 0.0 0.0 0.0 4.402597231172054 0.0 33 0.0 0.0 0.0 4.558444301247136 0.0 34 0.0 0.0 0.0 4.721611233708806 0.0 35 0.0 0.0 0.0 4.895637962006314 0.0 36 0.0 0.0 0.0 5.066364752342656 0.0 37 0.0 0.0 0.0 5.251281275912013 0.0 38 0.0 0.0 0.0 5.449487549634067 0.0 39 0.0 0.0 0.0 5.717112518284656 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 9650 0.0 41.199482 1 AGGGCGA 3175 0.0 39.61417 6 TACGGGA 1510 0.0 39.188744 4 CGTTAGG 540 0.0 39.166668 2 TAAGGGA 5610 0.0 38.622993 4 GCGAGAC 530 0.0 37.78302 21 GGGCGAT 5855 0.0 37.775406 7 TAGGGAC 4340 0.0 37.63825 5 ACGGGAT 1890 0.0 37.619045 5 AAGGGAT 6780 0.0 37.433628 5 TTAGGGA 5605 0.0 37.292595 4 ATAGGGA 6415 0.0 37.24864 4 AACGGGA 1720 0.0 36.889534 4 AGGGATT 7010 0.0 36.81526 6 GACCGAT 2165 0.0 36.68591 9 TAGGGAT 6975 0.0 36.677418 5 GGCGATA 1355 0.0 36.36531 8 CACGACC 545 0.0 36.330273 27 AGGGATG 7890 0.0 36.302284 6 GCGCGAC 255 0.0 36.17647 9 >>END_MODULE