##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1548008_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2117398 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.85077061563296 31.0 31.0 31.0 30.0 33.0 2 31.18941880553396 31.0 31.0 33.0 30.0 34.0 3 31.38375827312579 31.0 31.0 34.0 30.0 34.0 4 35.2466876798788 37.0 35.0 37.0 33.0 37.0 5 35.05687830063125 35.0 35.0 37.0 32.0 37.0 6 35.077601376784145 37.0 35.0 37.0 32.0 37.0 7 35.49769197855103 35.0 35.0 37.0 35.0 37.0 8 35.5933934007683 37.0 35.0 37.0 35.0 37.0 9 37.427883184927914 39.0 37.0 39.0 35.0 39.0 10 36.55147922119507 38.0 35.0 39.0 32.0 39.0 11 36.09541522189026 38.0 35.0 39.0 31.0 39.0 12 35.31070823718545 37.0 35.0 39.0 30.0 39.0 13 34.8290897601679 37.0 33.0 39.0 27.0 39.0 14 35.74683314143113 38.0 34.0 40.0 27.0 41.0 15 36.1070521460774 38.0 34.0 40.0 30.0 41.0 16 36.331993796159246 38.0 34.0 40.0 31.0 41.0 17 36.29232482509193 38.0 34.0 40.0 31.0 41.0 18 36.22532561190669 38.0 35.0 40.0 30.0 41.0 19 36.16145287754121 37.0 34.0 40.0 30.0 41.0 20 36.031509900358834 37.0 34.0 40.0 30.0 41.0 21 35.86486905154345 37.0 34.0 40.0 30.0 41.0 22 35.745691173789716 37.0 34.0 40.0 29.0 41.0 23 35.716076524111195 37.0 34.0 40.0 29.0 41.0 24 35.58172200030415 37.0 34.0 40.0 29.0 41.0 25 35.434206039677 37.0 34.0 40.0 29.0 41.0 26 35.1601271938483 36.0 34.0 40.0 27.0 41.0 27 35.23611904800137 37.0 34.0 40.0 28.0 41.0 28 35.32029358675128 37.0 34.0 40.0 29.0 41.0 29 35.35511698792575 37.0 34.0 40.0 29.0 41.0 30 35.30113375000826 36.0 34.0 40.0 29.0 41.0 31 35.189694143472316 36.0 34.0 40.0 28.0 41.0 32 35.05017856822383 36.0 34.0 40.0 27.0 41.0 33 34.93001079626976 36.0 33.0 40.0 27.0 41.0 34 34.813720897063284 36.0 34.0 40.0 26.0 41.0 35 34.700816284893065 36.0 33.0 40.0 25.0 41.0 36 34.56126198286765 36.0 33.0 40.0 25.0 41.0 37 34.47041415926529 36.0 33.0 40.0 24.0 41.0 38 34.41585332563835 36.0 33.0 40.0 24.0 41.0 39 34.40442514822438 36.0 33.0 40.0 24.0 41.0 40 34.21108360355493 36.0 33.0 40.0 23.0 41.0 41 34.18624132071533 36.0 33.0 40.0 23.0 41.0 42 34.13381943309666 36.0 33.0 40.0 23.0 41.0 43 34.088045799608764 35.0 33.0 40.0 23.0 41.0 44 33.933601051857046 35.0 33.0 40.0 23.0 41.0 45 33.80743865820219 35.0 33.0 40.0 23.0 41.0 46 33.775357301744876 35.0 33.0 40.0 23.0 41.0 47 33.72250233541356 35.0 33.0 40.0 23.0 41.0 48 33.64164129747927 35.0 32.0 39.0 23.0 41.0 49 33.51988100489374 35.0 32.0 39.0 23.0 41.0 50 33.363447495463774 35.0 32.0 39.0 23.0 41.0 51 33.01541325721475 35.0 31.0 39.0 22.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 2.0 13 6.0 14 17.0 15 90.0 16 268.0 17 649.0 18 1455.0 19 2614.0 20 4517.0 21 7058.0 22 10443.0 23 15177.0 24 21315.0 25 29099.0 26 37174.0 27 44270.0 28 52143.0 29 62159.0 30 73794.0 31 89585.0 32 109227.0 33 138290.0 34 213512.0 35 251205.0 36 166969.0 37 198548.0 38 264912.0 39 322868.0 40 31.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.62310628422242 24.328066806523857 30.13788621695118 12.910940692302534 2 28.24962524759162 27.32145775144777 30.67453544397416 13.754381556986454 3 27.956387981853197 26.69224208202709 31.415775399806744 13.935594536312964 4 24.527981985436842 29.48760695910736 30.729886398305844 15.254524657149954 5 22.421056409801086 34.10265807373011 28.954830409776527 14.521455106692272 6 20.66304964867257 41.960793388866904 26.857917122808278 10.518239839652251 7 90.91573714530759 3.3803753474783678 4.477807195435152 1.226080311778891 8 91.61456655763347 2.3633724032987655 4.049167893801732 1.9728931452660292 9 87.33502156892563 5.039345460796694 5.569996760174516 2.055636210103155 10 46.87914128567232 33.10124029587257 10.169226569591546 9.85039184886356 11 38.989363360124074 23.017968279936035 22.864666916659033 15.128001443280855 12 36.6070998461319 23.307002273545173 23.76204190237263 16.323855977950295 13 22.73512112507899 36.74042385985063 24.8397325396548 15.68472247541558 14 16.918737053685703 38.8762528348473 27.594528756520976 16.610481354946025 15 15.806522911611326 26.36717329477028 42.119337035361326 15.706966758257067 16 19.038555812369708 23.384691966271813 40.29417237571774 17.282579845640736 17 19.424076153845427 22.937822742819254 26.76563404707098 30.87246705626434 18 21.84053257819267 25.368258589079616 32.31598405212435 20.475224780603362 19 27.23658943665763 27.009046008355536 25.414352899171533 20.3400116558153 20 29.470416048376357 27.656774966255753 24.36646298900821 18.506345996359684 21 23.384928105155478 29.197864548847217 28.641521338926363 18.775686007070945 22 23.59764201156325 24.357678622535772 26.655215505068014 25.38946386083297 23 19.97031261954531 30.529121119411656 26.185251898792767 23.315314362250273 24 20.06009262311573 26.422099199111358 35.596850474025196 17.920957703747714 25 19.10231331095996 27.460260187267583 32.38531442836916 21.0521120734033 26 17.976261430302664 35.102422879401985 26.062223540401945 20.859092149893407 27 18.303738834172886 34.03573631409872 28.79255576892016 18.86796908280824 28 15.985563413208098 30.68539783262287 34.69295805512237 18.63608069904666 29 16.14864092626894 27.7609594417299 34.327981796525734 21.76241783547543 30 19.126777299307925 31.318344496405494 29.947085998947763 19.607792205338818 31 26.344315050831256 28.057786018500064 25.14288763850726 20.45501129216142 32 26.85480008954386 27.953459859695723 26.33704197321429 18.85469807754612 33 25.4402337208215 28.335485345693158 25.04408712958074 21.180193803904604 34 18.756653213047333 29.148133699946822 28.450201615378873 23.64501147162697 35 18.75764499635874 28.538139735656685 29.77640481383283 22.927810454151746 36 27.129665750132947 26.876241500180882 26.76218641936943 19.231906330316736 37 19.603683388763002 32.02019648644232 28.500924247590675 19.875195877204003 38 19.976263319413732 32.39452384483219 25.17641935998806 22.45279347576601 39 19.673155448338004 31.170899377443444 27.735739808954197 21.420205365264348 40 22.90769142126327 26.850407906307648 26.946091381969755 23.295809290459328 41 17.280737962348127 25.63164789992245 29.13675180575404 27.95086233197538 42 20.966251975301763 27.134577438913233 26.137079566524573 25.76209101926043 43 21.391443649233636 26.46743786477554 27.611672439475242 24.52944604651558 44 19.375762138247037 30.33312584596755 28.170282582679306 22.120829433106103 45 17.900177481984965 34.525488358825314 24.26341198017567 23.310922179014053 46 21.565808600933785 31.550846841264608 26.13311243327896 20.750232124522643 47 20.279654557149858 28.178122393617073 27.83874359001 23.703479459223065 48 21.76865190200425 26.09995853401203 30.535213502610283 21.59617606137344 49 21.100567772331893 25.386205144238357 30.532332608229535 22.980894475200223 50 19.01361954625441 31.852254512377925 27.701641354152596 21.432484587215065 51 18.203238125283956 32.397026916999074 25.683126176561988 23.71660878115498 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2045.0 1 2328.5 2 2612.0 3 7076.0 4 11540.0 5 8854.5 6 6169.0 7 6313.5 8 6458.0 9 7275.0 10 8092.0 11 8863.0 12 9634.0 13 10012.5 14 10391.0 15 10323.5 16 10256.0 17 10152.0 18 10048.0 19 10274.5 20 10501.0 21 10584.0 22 10667.0 23 11392.5 24 12118.0 25 15539.0 26 20464.5 27 21969.0 28 25668.5 29 29368.0 30 32890.0 31 36412.0 32 42466.5 33 48521.0 34 57365.5 35 66210.0 36 69734.5 37 73259.0 38 80002.5 39 86746.0 40 115064.0 41 143382.0 42 165955.0 43 188528.0 44 194927.0 45 201326.0 46 198513.0 47 195700.0 48 189977.0 49 184254.0 50 170531.0 51 156808.0 52 143397.0 53 129986.0 54 117905.5 55 105825.0 56 95050.5 57 84276.0 58 75907.5 59 67539.0 60 61077.5 61 54616.0 62 47948.0 63 41280.0 64 34675.5 65 28071.0 66 22287.5 67 16504.0 68 13251.5 69 9999.0 70 8271.5 71 6544.0 72 5543.5 73 4543.0 74 3848.0 75 2268.5 76 1384.0 77 1089.5 78 795.0 79 599.5 80 404.0 81 317.5 82 231.0 83 172.0 84 113.0 85 92.5 86 72.0 87 56.5 88 41.0 89 34.5 90 28.0 91 20.0 92 12.0 93 9.0 94 6.0 95 3.0 96 0.0 97 1.0 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2117398.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.196113790425585 #Duplication Level Percentage of deduplicated Percentage of total 1 78.69259420257322 15.892845869789534 2 8.222970971217745 3.3214411486015996 3 2.8598972411756964 1.7327643033512568 4 1.4305431051364856 1.1556564533378086 5 0.8537431994857662 0.8621147402308271 6 0.5988408012220677 0.7256554178298305 7 0.41698215772980496 0.589499337426183 8 0.3247467953163769 0.5246898585028476 9 0.2719954698704338 0.4943926313985199 >10 3.3644244829785577 17.0806433257049 >50 1.9493852714507875 28.80257135691091 >100 1.008615622962217 27.57866425044163 >500 0.004543313578923588 0.6682344505469526 >1k 4.782435346235355E-4 0.2419011608578222 >5k 2.3912176731176774E-4 0.3289256950694005 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6811 0.321668387331999 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 3569 0.16855593516192988 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.049872532230596234 0.0 2 0.0 0.0 0.0 0.21233608419390212 0.0 3 0.0 0.0 0.0 0.3140647152779024 0.0 4 0.0 0.0 0.0 0.5790125427529449 0.0 5 0.0 0.0 0.0 1.0079824388234995 0.0 6 0.0 0.0 0.0 1.5639005987537535 0.0 7 0.0 0.0 0.0 1.8359325927388237 0.0 8 0.0 0.0 0.0 2.457544590105403 0.0 9 0.0 0.0 0.0 2.6510840191593643 0.0 10 0.0 0.0 0.0 2.974405378677037 0.0 11 0.0 0.0 0.0 3.479695361948958 0.0 12 0.0 0.0 0.0 3.8682382811356204 0.0 13 0.0 0.0 0.0 4.041989271738237 0.0 14 0.0 0.0 0.0 4.119678964464876 0.0 15 0.0 0.0 0.0 4.216259767884923 0.0 16 0.0 0.0 0.0 4.412160585775561 0.0 17 0.0 0.0 0.0 4.657178291469058 0.0 18 0.0 0.0 0.0 4.929399196561063 0.0 19 0.0 0.0 0.0 5.087942843055486 0.0 20 0.0 0.0 0.0 5.241433117439423 0.0 21 0.0 0.0 0.0 5.464112084737966 0.0 22 0.0 0.0 0.0 5.720700595731175 0.0 23 0.0 0.0 0.0 5.993771600804384 0.0 24 0.0 0.0 0.0 6.212530662634045 0.0 25 0.0 0.0 0.0 6.390768292026346 0.0 26 0.0 0.0 0.0 6.564708193735896 0.0 27 0.0 0.0 0.0 6.736617301045906 0.0 28 0.0 0.0 0.0 6.917783052595686 0.0 29 0.0 0.0 0.0 7.118642787043343 0.0 30 0.0 0.0 0.0 7.3589377150634885 0.0 31 0.0 0.0 0.0 7.5699514215088515 0.0 32 0.0 0.0 0.0 7.761271145056338 0.0 33 0.0 0.0 0.0 7.9553300796543684 0.0 34 0.0 0.0 0.0 8.159542986250106 0.0 35 0.0 0.0 0.0 8.400546330921253 0.0 36 0.0 0.0 0.0 8.599894776513437 0.0 37 0.0 0.0 0.0 8.817189777264359 0.0 38 0.0 0.0 0.0 9.055076088671095 0.0 39 0.0 0.0 0.0 9.380333787034841 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCCCGTA 25 3.8919236E-5 45.0 37 TATAGCG 160 0.0 45.0 1 TCGGTAA 20 7.0346345E-4 45.0 23 TACCGGT 25 3.8919236E-5 45.0 20 CGGTCTA 240 0.0 42.187504 31 TCGGTAC 70 0.0 41.785717 36 CGACGGT 270 0.0 41.666664 28 TCGATAG 65 0.0 41.53846 1 TACGGGA 825 0.0 40.636364 4 GACCGAT 1020 0.0 40.588234 9 CGTTTTT 4085 0.0 39.76744 1 TAGTAGG 1280 0.0 39.55078 2 TATTGCG 205 0.0 39.512196 1 CGTTAGG 160 0.0 39.375 2 TAAGGGA 2670 0.0 39.269665 4 GGACCGA 1095 0.0 39.041096 8 TATGGGA 2590 0.0 39.00579 4 ACGGTCT 260 0.0 38.942307 30 ACGGGAT 965 0.0 38.937824 5 CGCGTAG 35 6.2507825E-6 38.57143 44 >>END_MODULE