##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1548003_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2817437 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.889635154219953 31.0 31.0 31.0 30.0 33.0 2 31.23180216629511 31.0 31.0 33.0 30.0 34.0 3 31.371607954321604 31.0 31.0 34.0 30.0 34.0 4 35.25279961894445 37.0 35.0 37.0 33.0 37.0 5 35.092947952341085 35.0 35.0 37.0 32.0 37.0 6 35.129833604087686 37.0 35.0 37.0 32.0 37.0 7 35.56774508178887 36.0 35.0 37.0 35.0 37.0 8 35.67012749530868 37.0 35.0 37.0 35.0 37.0 9 37.490804585870066 39.0 37.0 39.0 35.0 39.0 10 36.614971337424755 39.0 35.0 39.0 32.0 39.0 11 36.145935472558925 38.0 35.0 39.0 31.0 39.0 12 35.72694864162003 37.0 35.0 39.0 30.0 39.0 13 35.5147781476569 37.0 35.0 39.0 30.0 39.0 14 36.549888781896456 38.0 35.0 40.0 30.0 41.0 15 36.74357581021332 38.0 35.0 40.0 31.0 41.0 16 36.85867545574222 38.0 35.0 40.0 31.0 41.0 17 36.792608672350084 38.0 35.0 40.0 31.0 41.0 18 36.6903458710878 38.0 35.0 40.0 31.0 41.0 19 36.63947800784898 38.0 35.0 40.0 31.0 41.0 20 36.51770527610733 38.0 35.0 40.0 30.0 41.0 21 36.40013494534217 38.0 35.0 40.0 30.0 41.0 22 36.27215763830744 38.0 34.0 40.0 30.0 41.0 23 36.19209267145991 38.0 34.0 40.0 30.0 41.0 24 36.09574127123339 38.0 34.0 40.0 30.0 41.0 25 35.94137437678287 38.0 34.0 40.0 30.0 41.0 26 35.704146712064905 38.0 34.0 40.0 29.0 41.0 27 35.778637108833315 38.0 34.0 40.0 29.0 41.0 28 35.79779565612292 38.0 34.0 40.0 29.0 41.0 29 35.80848906293202 38.0 34.0 40.0 29.0 41.0 30 35.74563441879978 38.0 34.0 40.0 29.0 41.0 31 35.66387322946352 38.0 34.0 40.0 29.0 41.0 32 35.525806610760064 38.0 34.0 40.0 29.0 41.0 33 35.38329730176753 38.0 34.0 40.0 27.0 41.0 34 35.23265826352107 38.0 34.0 40.0 27.0 41.0 35 35.093257098561565 38.0 34.0 40.0 26.0 41.0 36 35.00995834157072 38.0 34.0 40.0 25.0 41.0 37 34.960651826464975 38.0 34.0 40.0 25.0 41.0 38 34.88815473070028 38.0 33.0 40.0 25.0 41.0 39 34.86623516337721 37.0 34.0 40.0 25.0 41.0 40 34.70181906463215 37.0 33.0 40.0 24.0 41.0 41 34.644813708345566 37.0 33.0 40.0 24.0 41.0 42 34.611574633257106 37.0 33.0 40.0 24.0 41.0 43 34.58049283799425 37.0 33.0 40.0 24.0 41.0 44 34.42854977768802 37.0 33.0 40.0 24.0 41.0 45 34.32992361497347 37.0 33.0 40.0 23.0 41.0 46 34.282365497436146 37.0 33.0 40.0 23.0 41.0 47 34.24643709868224 37.0 33.0 40.0 23.0 41.0 48 34.15999257481179 37.0 33.0 40.0 23.0 41.0 49 34.03664003844629 36.0 33.0 40.0 23.0 41.0 50 33.90947410714064 36.0 33.0 40.0 23.0 41.0 51 33.57594508768075 36.0 32.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 0.0 12 4.0 13 8.0 14 37.0 15 102.0 16 245.0 17 698.0 18 1505.0 19 2914.0 20 4955.0 21 8000.0 22 11944.0 23 17822.0 24 25554.0 25 35948.0 26 46550.0 27 54550.0 28 62679.0 29 74153.0 30 88813.0 31 106942.0 32 130626.0 33 165153.0 34 240036.0 35 281724.0 36 242541.0 37 292956.0 38 403780.0 39 517137.0 40 59.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.56291941931621 25.699101701298023 30.397733826878827 13.34024505250694 2 28.97438345560167 27.32000751037201 30.441780951978696 13.26382808204762 3 27.863196231184585 26.190399288431294 32.209202903206 13.737201577178123 4 24.376445684499778 29.498086381345885 31.824065631281194 14.301402302873143 5 22.756746645976467 33.70953813696633 29.908175409068598 13.625539807988607 6 21.81170333178701 41.93818708279901 26.338512626901682 9.911596958512293 7 91.18695466837413 2.9516897804635915 4.995604160802886 0.865751390359394 8 91.99740757291113 2.2846651052002227 4.577422671740309 1.140504650148344 9 87.28734662035033 5.495491114796888 5.649247880254288 1.5679143845984844 10 41.21838394256908 39.98467401400635 10.219642888199452 8.577299155225122 11 29.54546987208587 26.530673090471947 27.627556534538307 16.29630050290388 12 30.003155350057515 24.856278951401574 27.915584270384752 17.22498142815616 13 22.85520492561147 31.116365689809566 28.579485539516945 17.448943845062022 14 18.132863308034928 34.22344492529913 29.139923980553956 18.50376778611199 15 17.061251059029892 28.91493225935487 37.51331440596542 16.51050227564982 16 21.022688351150354 26.679141361457237 35.43937273486505 16.85879755252735 17 20.5222335051325 26.471967252506445 28.6735781492186 24.332221093142454 18 21.96709278681298 28.161304050454365 31.19807115474099 18.67353200799166 19 25.32990089929251 28.702256696423024 27.193225616047496 18.77461678823697 20 27.095690160951246 28.899563681459426 26.968659813866292 17.036086343723035 21 24.159297971880118 28.62953102411873 29.211513868810552 17.9996571351906 22 23.583029540678282 26.197036526460042 29.063684476352087 21.156249456509588 23 20.492277200874412 30.58677088431791 28.332310536136212 20.588641378671465 24 20.25748934226391 28.308920483403888 33.256963687209335 18.17662648712287 25 19.967864410100386 30.093769621113093 30.49686647829215 19.441499490494373 26 19.391631472150042 34.07543806658321 27.528707829136906 19.004222632129842 27 19.023885893455645 32.883077776007056 29.841448096266216 18.251588234271075 28 17.346936240277955 31.363611679693282 33.194779510597755 18.09467256943101 29 18.342344478332613 28.663178626531842 32.90582895021255 20.08864794492299 30 19.896629454358695 30.053236327910792 30.959521011472486 19.090613206258027 31 23.28662539748005 29.53290526105819 27.90994084339774 19.27052849806402 32 24.101727917962318 29.9180070397315 28.295929953358318 17.684335088947865 33 23.192674760784357 30.26584090433965 27.314328590133513 19.227155744742475 34 19.708515221458367 30.199539510555162 29.527687753089065 20.564257514897406 35 19.81325580660721 29.507705052499844 30.18889153510797 20.490147605784976 36 23.090880115509236 29.750336919689772 28.195874477406242 18.96290848739475 37 20.64706327062504 31.77572382275096 28.79304843373605 18.784164472887948 38 20.208757107967276 32.280544338702164 27.130828479926972 20.379870073403595 39 20.24723179258312 31.492239223095314 28.23040941110662 20.030119573214947 40 22.312122684553373 29.149684624713878 28.198323511759092 20.339869178973654 41 18.80237251090264 28.94339784705035 29.439451529883364 22.814778112163644 42 21.20562056933305 29.428448621921273 27.573535805769573 21.792395002976107 43 21.276997498080704 28.98953907398817 28.226682619700107 21.506780808231028 44 20.02259500389893 30.884523771072786 28.54931627574991 20.54356494927837 45 19.327601646460952 32.889040642257484 26.60031084989655 21.18304686138501 46 20.727136045987894 31.6210442327548 27.726334253436725 19.925485467820575 47 20.427395537149547 30.154179135150137 28.497602608328066 20.920822719372254 48 20.784315674139297 28.605537586111062 29.948105316995555 20.662041422754086 49 20.685112036222993 28.020289362282103 29.959321184466592 21.335277417028315 50 19.515573906355314 31.29858804296245 29.082850832157025 20.102987218525207 51 18.928054114430953 31.65313013210233 27.584574206983152 21.83424154648356 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2438.0 1 2770.0 2 3102.0 3 13818.5 4 24535.0 5 18642.5 6 12750.0 7 12473.5 8 12197.0 9 13618.0 10 15039.0 11 15913.0 12 16787.0 13 16960.5 14 17134.0 15 16347.5 16 15561.0 17 15518.5 18 15476.0 19 15290.5 20 15105.0 21 16650.0 22 18195.0 23 20269.5 24 22344.0 25 25896.5 26 36309.0 27 43169.0 28 50323.0 29 57477.0 30 64488.0 31 71499.0 32 81546.0 33 91593.0 34 102370.5 35 113148.0 36 118635.0 37 124122.0 38 135276.5 39 146431.0 40 169634.5 41 192838.0 42 209698.5 43 226559.0 44 233235.5 45 239912.0 46 234568.5 47 229225.0 48 221584.5 49 213944.0 50 199493.5 51 185043.0 52 170109.5 53 155176.0 54 140390.0 55 125604.0 56 114003.0 57 102402.0 58 93624.5 59 84847.0 60 77411.5 61 69976.0 62 59764.5 63 49553.0 64 40237.0 65 30921.0 66 24161.5 67 17402.0 68 13862.5 69 10323.0 70 8510.5 71 6698.0 72 5300.5 73 3903.0 74 3298.0 75 2072.5 76 1452.0 77 1067.5 78 683.0 79 512.0 80 341.0 81 261.5 82 182.0 83 131.5 84 81.0 85 63.0 86 45.0 87 38.5 88 32.0 89 31.0 90 30.0 91 23.5 92 17.0 93 9.0 94 1.0 95 2.0 96 3.0 97 1.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2817437.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.716352976984414 #Duplication Level Percentage of deduplicated Percentage of total 1 77.11226249624963 15.974848487261845 2 7.693719972784212 3.1877163732454528 3 2.8316297178423917 1.759831222048253 4 1.52479279717653 1.263525832122896 5 0.9877642086602665 1.0231436002318883 6 0.7326505848591125 0.9106708874841268 7 0.5065046702359409 0.7345050673169191 8 0.43263509498813885 0.7170097070404372 9 0.36440225553961975 0.6794177176231233 >10 5.071699931400244 26.543249240455314 >50 2.2382594641085762 32.92984943829875 >100 0.5010381409274826 13.231076065693667 >500 0.0019364878337626108 0.2486522461618729 >1k 5.281330455716211E-4 0.2565297593873004 >5k 0.0 0.0 >10k+ 1.760443485238737E-4 0.5399743556281447 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 14806 0.5255130815702357 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 3652 0.12962135444377282 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 7.098650298125566E-5 0.0 0.0 0.024135411013626925 0.0 2 7.098650298125566E-5 0.0 0.0 0.08564521584688495 0.0 3 7.098650298125566E-5 0.0 0.0 0.13444843664649822 0.0 4 7.098650298125566E-5 0.0 0.0 0.2277956880668494 0.0 5 7.098650298125566E-5 0.0 0.0 0.4126445418300391 0.0 6 7.098650298125566E-5 0.0 0.0 0.6927927758455646 0.0 7 7.098650298125566E-5 0.0 0.0 0.8350852210714915 0.0 8 7.098650298125566E-5 0.0 0.0 1.1327671213233872 0.0 9 7.098650298125566E-5 0.0 0.0 1.2732494107232921 0.0 10 7.098650298125566E-5 0.0 0.0 1.489367819049725 0.0 11 7.098650298125566E-5 0.0 0.0 1.7769341426267917 0.0 12 7.098650298125566E-5 0.0 0.0 1.9977021668984967 0.0 13 7.098650298125566E-5 0.0 0.0 2.1176338636853282 0.0 14 7.098650298125566E-5 0.0 0.0 2.185390480780937 0.0 15 7.098650298125566E-5 0.0 0.0 2.2587550316120644 0.0 16 7.098650298125566E-5 0.0 0.0 2.3921031774623533 0.0 17 7.098650298125566E-5 0.0 0.0 2.563287129401651 0.0 18 7.098650298125566E-5 0.0 0.0 2.753779410151851 0.0 19 7.098650298125566E-5 0.0 0.0 2.8842526026313986 0.0 20 7.098650298125566E-5 0.0 0.0 3.0226052969418657 0.0 21 7.098650298125566E-5 0.0 0.0 3.196344762988489 0.0 22 7.098650298125566E-5 0.0 0.0 3.3928708964920955 0.0 23 1.0647975447188348E-4 0.0 0.0 3.6061143514477876 0.0 24 1.0647975447188348E-4 0.0 0.0 3.764769185610894 0.0 25 1.0647975447188348E-4 0.0 0.0 3.916360862727365 0.0 26 1.0647975447188348E-4 0.0 0.0 4.057482030654102 0.0 27 1.0647975447188348E-4 0.0 0.0 4.1980707998084785 0.0 28 1.0647975447188348E-4 0.0 0.0 4.3530343358165595 0.0 29 1.0647975447188348E-4 0.0 0.0 4.52212418591791 0.0 30 1.0647975447188348E-4 0.0 0.0 4.738455553753287 0.0 31 1.0647975447188348E-4 0.0 0.0 4.930474044317584 0.0 32 1.0647975447188348E-4 0.0 0.0 5.111489626919786 0.0 33 1.0647975447188348E-4 0.0 0.0 5.290695053695965 0.0 34 1.0647975447188348E-4 0.0 0.0 5.485446524625041 0.0 35 1.0647975447188348E-4 0.0 0.0 5.700784081418679 0.0 36 1.0647975447188348E-4 0.0 0.0 5.90266969589737 0.0 37 1.0647975447188348E-4 0.0 0.0 6.1092049263213335 0.0 38 1.0647975447188348E-4 0.0 0.0 6.329937457341549 0.0 39 1.0647975447188348E-4 0.0 0.0 6.606287913447576 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TACGGGA 1350 0.0 41.166668 4 CGTTTTT 8690 0.0 41.142117 1 TTCGTAG 200 0.0 40.5 1 CGGTCTA 130 0.0 39.80769 31 CGGCTAC 515 0.0 39.32039 25 TAAGGGA 5090 0.0 39.16503 4 ATTAGCG 220 0.0 38.863636 1 ACGGGAT 1555 0.0 38.778137 5 GGGCGAT 5180 0.0 38.44112 7 CTCGTCC 445 0.0 38.426964 37 TCGTCCC 440 0.0 38.352272 38 TGGGCGA 1505 0.0 38.272423 6 ACGGGAC 1050 0.0 38.142857 5 AGGGCGA 2435 0.0 37.792606 6 TAGGGCG 835 0.0 37.724552 5 ACGCGAG 30 1.1403425E-4 37.500004 1 GCGCGTT 30 1.1403425E-4 37.500004 31 AAGGGAT 5695 0.0 37.29587 5 AGGGATC 3895 0.0 37.259308 6 CGACGGT 145 0.0 37.24138 28 >>END_MODULE