##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1548002_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2490450 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.89354976008352 31.0 31.0 31.0 30.0 33.0 2 31.254674456423537 31.0 31.0 33.0 30.0 34.0 3 31.47547270573591 31.0 31.0 34.0 30.0 34.0 4 35.3442289546066 37.0 35.0 37.0 33.0 37.0 5 35.160089140516774 37.0 35.0 37.0 32.0 37.0 6 35.193657371157826 37.0 35.0 37.0 32.0 37.0 7 35.53181352767572 35.0 35.0 37.0 35.0 37.0 8 35.621157622116485 37.0 35.0 37.0 35.0 37.0 9 37.47427934710594 39.0 37.0 39.0 35.0 39.0 10 36.451335702383105 38.0 35.0 39.0 32.0 39.0 11 36.20725852757534 38.0 35.0 39.0 31.0 39.0 12 35.74154470075689 37.0 35.0 39.0 30.0 39.0 13 35.4820285490574 37.0 35.0 39.0 30.0 39.0 14 36.50180288702845 38.0 35.0 40.0 30.0 41.0 15 36.71079202553755 38.0 35.0 40.0 31.0 41.0 16 36.828304924812784 38.0 35.0 40.0 31.0 41.0 17 36.77156819048766 38.0 35.0 40.0 31.0 41.0 18 36.704932441928165 38.0 35.0 40.0 31.0 41.0 19 36.664022164669035 38.0 35.0 40.0 31.0 41.0 20 36.557818065008334 38.0 35.0 40.0 31.0 41.0 21 36.44142383906523 38.0 35.0 40.0 30.0 41.0 22 36.31134413459415 38.0 35.0 40.0 30.0 41.0 23 36.24564436146078 38.0 34.0 40.0 30.0 41.0 24 36.146072798088696 38.0 34.0 40.0 30.0 41.0 25 35.96899957838945 38.0 34.0 40.0 30.0 41.0 26 35.73667610271236 38.0 34.0 40.0 29.0 41.0 27 35.82685137224196 38.0 34.0 40.0 29.0 41.0 28 35.87690618161376 38.0 34.0 40.0 29.0 41.0 29 35.90883695717641 38.0 34.0 40.0 30.0 41.0 30 35.848139091328875 38.0 34.0 40.0 29.0 41.0 31 35.77260173864161 38.0 34.0 40.0 29.0 41.0 32 35.6606123391355 38.0 34.0 40.0 29.0 41.0 33 35.56834588126644 38.0 34.0 40.0 29.0 41.0 34 35.50306008954205 38.0 34.0 40.0 28.0 41.0 35 35.38514525487362 38.0 34.0 40.0 27.0 41.0 36 35.304022967736756 38.0 34.0 40.0 27.0 41.0 37 35.26100544078379 38.0 34.0 40.0 27.0 41.0 38 35.225249252143186 38.0 34.0 40.0 27.0 41.0 39 35.2201461583248 38.0 34.0 40.0 27.0 41.0 40 35.06205866409685 38.0 34.0 40.0 26.0 41.0 41 35.005859583609386 37.0 34.0 40.0 26.0 41.0 42 34.966703206247864 37.0 34.0 40.0 26.0 41.0 43 34.93257443433917 37.0 33.0 40.0 26.0 41.0 44 34.80579252745488 37.0 33.0 40.0 26.0 41.0 45 34.6777176815435 37.0 33.0 40.0 25.0 41.0 46 34.627789756871245 37.0 33.0 40.0 25.0 41.0 47 34.58838242084764 37.0 33.0 40.0 25.0 41.0 48 34.51184283964745 37.0 33.0 40.0 24.0 41.0 49 34.39010178883334 36.0 33.0 40.0 24.0 41.0 50 34.279031500331264 36.0 33.0 40.0 24.0 41.0 51 33.95402838844385 36.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 6.0 13 9.0 14 12.0 15 73.0 16 204.0 17 515.0 18 1107.0 19 2159.0 20 3829.0 21 6087.0 22 9346.0 23 13624.0 24 19516.0 25 27486.0 26 35741.0 27 43331.0 28 51277.0 29 62178.0 30 76214.0 31 94370.0 32 115788.0 33 146591.0 34 216783.0 35 257933.0 36 212382.0 37 263224.0 38 369282.0 39 461342.0 40 39.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.78758858840772 25.668453492340742 30.510188921680818 12.033768997570721 2 28.343472063281737 27.146218554879642 30.480234495773857 14.030074886064767 3 28.557248689995784 26.656026019394087 31.45343211066273 13.3332931799474 4 25.22993836455259 29.74631090766729 30.081310606516894 14.942440121263227 5 23.370314601778794 33.18147322772993 29.138709871709935 14.309502298781346 6 20.506936497420146 43.34140416390612 25.478206749784178 10.673452588889559 7 92.71091569796623 2.875745347226405 3.5249452910116643 0.8883936637956996 8 93.8844787086671 1.9377220984159491 3.12373265875645 1.0540665341604931 9 89.72723804934851 3.74735489570158 4.85538758055773 1.670019474392178 10 37.37706037061575 29.619867895360276 19.385813808749422 13.617257925274547 11 34.43907727519123 26.928948583589314 21.9770322632456 16.65494187797386 12 32.860366600413585 25.294223935433358 23.696239635407256 18.14916982874581 13 23.725872834226745 31.293902708345883 25.604448995161516 19.375775462265857 14 19.307032865546386 33.63191391114056 27.394366479953426 19.666686743359634 15 18.706699592443133 27.315545383364455 36.24276737135859 17.734987652833826 16 22.024895099279245 25.189343291373046 35.0585235599992 17.72723804934851 17 21.587785339998796 24.933726836515486 27.706478748820494 25.77200907466522 18 23.452508582786244 26.3546748579574 30.31604730068863 19.876769258567727 19 26.466983878415544 27.59585617057158 25.94025176172981 19.99690818928306 20 28.784516854383746 27.158385030817723 25.925073781846653 18.132024332951875 21 24.88200927543215 28.800497901985583 27.724387158947177 18.593105663635086 22 25.04029392278504 24.792708145114336 27.294786082836435 22.87221184926419 23 22.036941115059527 29.086470316609446 27.085787709048564 21.79080085928246 24 21.483185769640027 26.45015960970909 32.997651026922846 19.06900359372804 25 20.880523600152586 27.904113714388966 31.027163765584532 20.18819891987392 26 21.29719528599249 32.47473348190086 26.183300206789937 20.04477102531671 27 20.3348792386918 31.784336164147042 28.462366239033106 19.418418358128047 28 18.03320685016764 30.55114537533378 32.639201750687626 18.77644602381096 29 19.73691501535867 27.632435905157703 31.918609086711236 20.71203999277239 30 20.67084261880383 29.612158445260896 29.66411692665984 20.052882009275432 31 25.26294444779056 28.04854544359453 27.09409945993696 19.594410648677947 32 25.63781645887289 28.15402838844386 27.21138750025096 18.996767652432293 33 24.477624525688128 28.639000983757956 26.71159830552711 20.1717761850268 34 20.477785139231866 29.015438976891726 28.843863558794595 21.662912325081813 35 21.208897990323035 28.27814250436668 29.185127185849947 21.327832319460338 36 24.76030436266538 28.200044168724524 27.136059748238274 19.90359172037182 37 21.125539561123492 30.316569294705776 28.76825473308037 19.789636411090363 38 20.898632777208938 30.743721014274527 26.80800658515529 21.549639623361237 39 21.206167560079503 30.03742295569074 27.63865967997751 21.117749804252245 40 23.461262020919914 27.697645003914957 26.757252705334377 22.083840269830755 41 19.248449075468287 27.10839406532956 28.7712260836395 24.87193077556265 42 21.716236021602523 27.938163785661224 26.80776566483969 23.537834527896564 43 21.44993876608645 27.721455961773977 27.82870565560441 22.999899616535163 44 21.062378285048887 28.939508924090024 28.183581280491477 21.814531510369612 45 19.916601417414523 31.675359874721437 25.83721817342247 22.570820534441566 46 21.466481961091368 30.452127125619867 26.833222911522014 21.24816800176675 47 21.283422674617036 28.342267461703706 28.016623501776788 22.357686361902466 48 22.14298620731193 26.691280692244373 29.924511634443572 21.24122146600012 49 21.534903330723363 26.411050211809112 30.01883193800317 22.035214519464354 50 20.37463109076673 30.458511513983417 27.939930534642333 21.22692686060752 51 19.555542171093578 30.30809693027365 27.258447268565924 22.877913630066857 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1368.0 1 1734.5 2 2101.0 3 6310.5 4 10520.0 5 8466.0 6 6412.0 7 6323.0 8 6234.0 9 6648.0 10 7062.0 11 7218.5 12 7375.0 13 7418.5 14 7462.0 15 7291.5 16 7121.0 17 7173.5 18 7226.0 19 8057.0 20 8888.0 21 9965.0 22 11042.0 23 12604.0 24 14166.0 25 16571.0 26 22913.5 27 26851.0 28 33254.0 29 39657.0 30 45970.5 31 52284.0 32 62235.0 33 72186.0 34 80676.0 35 89166.0 36 93888.5 37 98611.0 38 111320.0 39 124029.0 40 145659.0 41 167289.0 42 185668.0 43 204047.0 44 206074.5 45 208102.0 46 208983.5 47 209865.0 48 203752.0 49 197639.0 50 189737.0 51 181835.0 52 172465.5 53 163096.0 54 146563.0 55 130030.0 56 117673.5 57 105317.0 58 97424.0 59 89531.0 60 80157.0 61 70783.0 62 61722.5 63 52662.0 64 43212.5 65 33763.0 66 27813.0 67 21863.0 68 18013.5 69 14164.0 70 11122.5 71 8081.0 72 6492.5 73 4904.0 74 4119.5 75 3141.5 76 2948.0 77 2097.5 78 1247.0 79 943.5 80 640.0 81 425.0 82 210.0 83 205.5 84 201.0 85 137.0 86 73.0 87 59.0 88 45.0 89 30.0 90 15.0 91 12.5 92 10.0 93 7.5 94 5.0 95 8.5 96 12.0 97 6.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2490450.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.500276238096678 #Duplication Level Percentage of deduplicated Percentage of total 1 78.01284218654894 14.432591305701973 2 7.18649546003763 2.6590430238904763 3 2.22659971460753 1.235781293757196 4 1.1250264704260209 0.8325320191220915 5 0.7519279030693813 0.695543695895817 6 0.5581525835098845 0.6195586186764113 7 0.44025027256002225 0.5701326159380435 8 0.36991563465921623 0.547483314078908 9 0.34384314977643543 0.5725073928097174 >10 5.681814509718055 27.712276543196555 >50 2.734268126748639 35.97925748418527 >100 0.5659752275054314 13.515215600662959 >500 0.0019999113458282185 0.2358064013743107 >1k 6.666371152760727E-4 0.18224019827271953 >5k 2.2221237175869095E-4 0.2100304924374744 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5109 0.20514364873817983 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 8.030677186853781E-5 0.0 0.0 0.016221967917444638 0.0 2 8.030677186853781E-5 0.0 0.0 0.06243851512778815 0.0 3 8.030677186853781E-5 0.0 0.0 0.09994177759039531 0.0 4 8.030677186853781E-5 0.0 0.0 0.1881587664879841 0.0 5 8.030677186853781E-5 0.0 0.0 0.3302615993093618 0.0 6 8.030677186853781E-5 0.0 0.0 0.5579312975566665 0.0 7 8.030677186853781E-5 0.0 0.0 0.6556244855347427 0.0 8 8.030677186853781E-5 0.0 0.0 0.88755044269108 0.0 9 8.030677186853781E-5 0.0 0.0 0.9670541468409324 0.0 10 8.030677186853781E-5 0.0 0.0 1.134252845871228 0.0 11 8.030677186853781E-5 0.0 0.0 1.380031721174888 0.0 12 8.030677186853781E-5 0.0 0.0 1.5490774759581603 0.0 13 8.030677186853781E-5 0.0 0.0 1.6427553253428095 0.0 14 8.030677186853781E-5 0.0 0.0 1.6896143267281014 0.0 15 8.030677186853781E-5 0.0 0.0 1.7481981168061997 0.0 16 8.030677186853781E-5 0.0 0.0 1.882029352125118 0.0 17 8.030677186853781E-5 0.0 0.0 2.0336886907988516 0.0 18 8.030677186853781E-5 0.0 0.0 2.2057057961412596 0.0 19 8.030677186853781E-5 0.0 0.0 2.306691561765946 0.0 20 8.030677186853781E-5 0.0 0.0 2.414061715754181 0.0 21 8.030677186853781E-5 0.0 0.0 2.560380654098657 0.0 22 8.030677186853781E-5 0.0 0.0 2.7186251480656107 0.0 23 8.030677186853781E-5 0.0 0.0 2.8916460880563752 0.0 24 8.030677186853781E-5 0.0 0.0 3.0299343492139976 0.0 25 8.030677186853781E-5 0.0 0.0 3.161717761850268 0.0 26 8.030677186853781E-5 0.0 0.0 3.281174085004718 0.0 27 8.030677186853781E-5 0.0 0.0 3.3987833524061917 0.0 28 8.030677186853781E-5 0.0 0.0 3.5328153546547814 0.0 29 8.030677186853781E-5 0.0 0.0 3.67182637675922 0.0 30 8.030677186853781E-5 0.0 0.0 3.848782348571543 0.0 31 8.030677186853781E-5 0.0 0.0 4.008552671203999 0.0 32 8.030677186853781E-5 0.0 0.0 4.171976951956474 0.0 33 8.030677186853781E-5 0.0 0.0 4.328494850328254 0.0 34 8.030677186853781E-5 0.0 0.0 4.489228854223132 0.0 35 8.030677186853781E-5 0.0 0.0 4.673532895661427 0.0 36 8.030677186853781E-5 0.0 0.0 4.844465859583609 0.0 37 8.030677186853781E-5 0.0 0.0 5.017808026661848 0.0 38 8.030677186853781E-5 0.0 0.0 5.2074524684294 0.0 39 8.030677186853781E-5 0.0 0.0 5.442189162601136 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGCGCG 25 3.8921207E-5 45.000004 1 GCGCGAC 200 0.0 43.875004 9 CGTAAGG 470 0.0 41.648937 2 TACGTCG 65 0.0 41.53846 1 TACGGGA 785 0.0 40.127388 4 CGTTTTT 4320 0.0 39.687504 1 GGCGATA 900 0.0 39.25 8 GCGATAC 115 0.0 39.130432 9 AGGGCGA 2175 0.0 38.89655 6 GCGTAAG 255 0.0 38.82353 1 CACGCCG 215 0.0 38.720932 26 GGGCGAT 4375 0.0 38.46857 7 ATATGCG 165 0.0 38.181816 1 GACCGAT 1880 0.0 38.05851 9 TCGATTG 95 0.0 37.894737 1 CGAACGG 155 0.0 37.74194 2 TAGGGCG 895 0.0 37.4581 5 CGTTAGG 440 0.0 37.329544 2 TACGGGT 525 0.0 37.285717 4 TAGGGAC 2490 0.0 37.048195 5 >>END_MODULE