##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1548000_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1560871 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.976089632006744 31.0 31.0 33.0 30.0 33.0 2 31.339114507220646 31.0 31.0 33.0 30.0 34.0 3 31.565890454752505 31.0 31.0 34.0 30.0 34.0 4 35.42864785110365 37.0 35.0 37.0 33.0 37.0 5 35.25816291032379 37.0 35.0 37.0 33.0 37.0 6 35.29468931128838 37.0 35.0 37.0 32.0 37.0 7 35.57225805335611 36.0 35.0 37.0 35.0 37.0 8 35.66149989332879 37.0 35.0 37.0 35.0 37.0 9 37.532568674797595 39.0 37.0 39.0 35.0 39.0 10 36.733945982723746 39.0 37.0 39.0 32.0 39.0 11 36.314911994649144 38.0 35.0 39.0 32.0 39.0 12 35.764874867942325 37.0 35.0 39.0 31.0 39.0 13 35.46536517111279 37.0 35.0 39.0 30.0 39.0 14 36.49438230321404 38.0 35.0 40.0 31.0 41.0 15 36.74640441138313 38.0 35.0 40.0 31.0 41.0 16 36.86850675039769 38.0 35.0 40.0 31.0 41.0 17 36.8231891040323 38.0 35.0 40.0 31.0 41.0 18 36.761305706877764 38.0 35.0 40.0 31.0 41.0 19 36.71899599646608 38.0 35.0 40.0 31.0 41.0 20 36.599743348425335 38.0 35.0 40.0 31.0 41.0 21 36.47712655305916 38.0 35.0 40.0 31.0 41.0 22 36.34422895934385 38.0 35.0 40.0 30.0 41.0 23 36.29387758501503 38.0 35.0 40.0 30.0 41.0 24 36.196893273050755 38.0 34.0 40.0 30.0 41.0 25 36.038881496292774 38.0 34.0 40.0 30.0 41.0 26 35.80767532999204 38.0 34.0 40.0 29.0 41.0 27 35.89675187763755 38.0 34.0 40.0 30.0 41.0 28 35.932126357655434 38.0 34.0 40.0 30.0 41.0 29 35.97063242253844 38.0 34.0 40.0 30.0 41.0 30 35.93943189411553 38.0 34.0 40.0 30.0 41.0 31 35.84323432237514 38.0 34.0 40.0 30.0 41.0 32 35.72447050396862 38.0 34.0 40.0 29.0 41.0 33 35.6207290672964 38.0 34.0 40.0 29.0 41.0 34 35.541547635903285 38.0 34.0 40.0 29.0 41.0 35 35.420355686024024 38.0 34.0 40.0 28.0 41.0 36 35.335962420981616 38.0 34.0 40.0 27.0 41.0 37 35.28342508765939 38.0 34.0 40.0 27.0 41.0 38 35.2390825378907 38.0 34.0 40.0 27.0 41.0 39 35.22610196486449 38.0 34.0 40.0 27.0 41.0 40 35.048753548499526 37.0 34.0 40.0 26.0 41.0 41 35.013974889660965 37.0 34.0 40.0 26.0 41.0 42 34.98702775565694 37.0 34.0 40.0 26.0 41.0 43 34.938488190247625 37.0 33.0 40.0 26.0 41.0 44 34.75762314758875 37.0 33.0 40.0 26.0 41.0 45 34.62666869971958 37.0 33.0 40.0 25.0 41.0 46 34.60873384155385 37.0 33.0 40.0 25.0 41.0 47 34.57565807808589 37.0 33.0 40.0 25.0 41.0 48 34.523625591096256 36.0 33.0 40.0 25.0 41.0 49 34.404641382920175 36.0 33.0 40.0 24.0 41.0 50 34.27204810647388 36.0 33.0 40.0 24.0 41.0 51 33.930968670697325 36.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 5.0 14 16.0 15 52.0 16 142.0 17 309.0 18 686.0 19 1352.0 20 2313.0 21 3589.0 22 5607.0 23 8368.0 24 12038.0 25 16818.0 26 21472.0 27 26288.0 28 31139.0 29 37610.0 30 46535.0 31 56955.0 32 71619.0 33 91650.0 34 140874.0 35 169979.0 36 129020.0 37 162010.0 38 229123.0 39 295275.0 40 26.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.34322375135421 25.60929122265709 30.2850139441376 11.762471081851094 2 28.36185693756883 27.185270275378297 31.01287678482078 13.439996002232087 3 28.079130177958334 26.894342966202846 31.18233345356535 13.844193402273476 4 25.39614100076175 29.278012084278586 30.368813310004477 14.957033604955184 5 23.02618217648992 34.09000487548298 29.199850596237614 13.68396235178948 6 20.968164569653737 43.57675938626574 25.184336181529414 10.270739862551101 7 92.81465284446952 2.969239610448269 3.360751785381367 0.8553557597008337 8 94.05389683067979 2.077878312813807 2.959245190665981 0.9089796658404186 9 89.70959163185171 5.012521854784924 3.7533530958035612 1.524533417559811 10 44.176808973963894 36.829949432079914 9.473748951707092 9.519492642249103 11 33.32933983653999 24.898534215832058 25.18696292006194 16.58516302756602 12 33.43543444653658 23.749688475216722 25.225723330115045 17.589153748131654 13 23.22741597479869 33.346061269637275 25.474686889563586 17.951835866000458 14 18.16844569474351 36.61923374833667 27.257601685212933 17.954718871706888 15 17.97932052040175 27.271952646951608 37.91722698416461 16.831499848482036 16 21.08316446394353 24.670776765024144 36.78843414990733 17.457624621125 17 21.031078160847372 23.920362413037335 27.438141909228886 27.610417516886404 18 22.503012740963218 26.04846909193649 31.52137492464143 19.927143242458857 19 27.358250617764057 27.14324245885791 25.41292650065252 20.085580422725517 20 28.405037956371793 27.282011133527373 25.993051315579567 18.319899594521264 21 24.655785135350712 27.36536203183991 28.495884669521054 19.482968163288316 22 24.673275369969716 24.386063934815883 27.707799042970237 23.232861652244164 23 21.10955998285573 29.691819503341403 27.102624111793993 22.09599640200888 24 21.502673827625728 26.248677821549638 33.72687429005985 18.52177406076479 25 20.566914242112254 28.434060213816515 31.335517156766958 19.66350838730427 26 19.723218638824093 33.72828375951632 26.02803178481758 20.520465816842005 27 19.769923331268245 32.7223710351464 28.733059938969973 18.774645694615376 28 17.96669936208694 29.781064546653756 33.864938230001066 18.387297861258233 29 18.72070145450841 27.198403968040918 33.1297717748616 20.95112280258907 30 20.25522929185051 29.926496167844746 30.468180906686076 19.350093633618666 31 25.49653366613897 27.965155352364164 26.88409227924665 19.65421870225022 32 26.06006518155568 28.187146791759215 27.609584648571218 18.14320337811389 33 25.627293991623905 28.31521631191815 26.260209844375353 19.797279852082585 34 20.48324300983233 29.2443129509101 27.802874164488927 22.469569874768638 35 20.40046871266107 28.31829151800501 30.07186372224226 21.209376047091656 36 25.91655556416898 27.387016608034877 27.37420324933963 19.322224578456513 37 20.66685843993514 31.02223053666831 28.56860048011655 19.742310543280002 38 21.217896930623994 31.503244022087667 25.67893182716573 21.599927220122613 39 20.90627604715572 30.185454147075575 28.24230830094223 20.665961504826473 40 23.63500891489431 27.4176405353165 26.951682746364046 21.99566780342514 41 19.205687081123298 27.26663510309308 28.45808526137009 25.06959255441353 42 21.90834476391707 27.589531742213165 26.482073150183457 24.020050343686314 43 21.62241466463276 28.459622864413525 26.796897373325535 23.121065097628183 44 20.58440447673126 29.686053491928543 28.70320481321006 21.026337218130134 45 19.881399551916846 32.70007579101668 25.566174270647608 21.852350386418866 46 21.927500735166454 31.065027154710418 26.65646296202569 20.35100914809744 47 21.150306463506592 28.9311544643984 27.847913120302703 22.0706259517923 48 22.424787186128768 27.171752181954815 29.198697393955044 21.20476323796137 49 21.826595535441427 26.58374715143019 29.86717031708578 21.722486996042594 50 20.231908979025174 30.842010646619737 27.71061798188319 21.215462392471895 51 19.535054466384473 31.878483231477812 26.42582250551135 22.160639796626374 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1114.0 1 1287.0 2 1460.0 3 4347.0 4 7234.0 5 5744.0 6 4254.0 7 4275.5 8 4297.0 9 4505.0 10 4713.0 11 4865.5 12 5018.0 13 5138.5 14 5259.0 15 5021.5 16 4784.0 17 4822.5 18 4861.0 19 5326.5 20 5792.0 21 5934.5 22 6077.0 23 7402.5 24 8728.0 25 10708.0 26 15790.5 27 18893.0 28 22116.5 29 25340.0 30 30520.5 31 35701.0 32 39602.0 33 43503.0 34 48844.0 35 54185.0 36 60099.0 37 66013.0 38 72562.0 39 79111.0 40 92905.5 41 106700.0 42 120216.0 43 133732.0 44 135375.5 45 137019.0 46 132965.0 47 128911.0 48 124841.0 49 120771.0 50 114270.5 51 107770.0 52 100711.5 53 93653.0 54 85507.5 55 77362.0 56 71891.0 57 66420.0 58 60968.5 59 55517.0 60 50771.5 61 46026.0 62 38835.5 63 31645.0 64 26710.5 65 21776.0 66 17647.5 67 13519.0 68 10812.0 69 8105.0 70 6713.5 71 5322.0 72 4211.5 73 3101.0 74 2600.0 75 1644.0 76 1189.0 77 879.0 78 569.0 79 445.0 80 321.0 81 250.5 82 180.0 83 129.0 84 78.0 85 54.0 86 30.0 87 24.0 88 18.0 89 13.0 90 8.0 91 5.5 92 3.0 93 2.0 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1560871.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.892628699785103 #Duplication Level Percentage of deduplicated Percentage of total 1 76.9919271521945 14.545798925673136 2 6.050666274847428 2.2862598263400864 3 2.1288444188214073 1.20658401493208 4 1.1968415775920713 0.9044593415164818 5 0.8378084956060863 0.7914202414505664 6 0.6734000818312172 0.7633378627465255 7 0.5466596073720821 0.7229485891075739 8 0.4569132837951004 0.6905834414992295 9 0.4351157279326854 0.7398431900342044 >10 7.923936541926316 38.616976590624226 >50 2.5122647866932635 32.2805873579985 >100 0.2438923186316542 5.938006481477485 >500 0.0010378396537502979 0.12169733600980584 >1k 6.918931025001986E-4 0.3914968005900843 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3749 0.24018640874229838 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 2241 0.14357368418017888 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.00909748467362133 0.0 2 0.0 0.0 0.0 0.03754314097705704 0.0 3 0.0 0.0 0.0 0.06118378776977726 0.0 4 0.0 0.0 0.0 0.10526174168140737 0.0 5 0.0 0.0 0.0 0.17989955608118802 0.0 6 0.0 0.0 0.0 0.30367660107721905 0.0 7 0.0 0.0 0.0 0.35396903395604123 0.0 8 0.0 0.0 0.0 0.4800524835172157 0.0 9 0.0 0.0 0.0 0.524514838189703 0.0 10 0.0 0.0 0.0 0.6026122594371989 0.0 11 0.0 0.0 0.0 0.7405480657914716 0.0 12 0.0 0.0 0.0 0.8535618894834999 0.0 13 0.0 0.0 0.0 0.9118626715468479 0.0 14 0.0 0.0 0.0 0.9414615301328553 0.0 15 0.0 0.0 0.0 0.9783640031751503 0.0 16 0.0 0.0 0.0 1.0543472202379311 0.0 17 0.0 0.0 0.0 1.1494223417566218 0.0 18 0.0 0.0 0.0 1.2623720986551739 0.0 19 0.0 0.0 0.0 1.3300266325660481 0.0 20 0.0 0.0 0.0 1.3935168249009688 0.0 21 0.0 0.0 0.0 1.4873106105501352 0.0 22 0.0 0.0 0.0 1.5928286194054473 0.0 23 0.0 0.0 0.0 1.7097505174995242 0.0 24 0.0 0.0 0.0 1.8015582325509283 0.0 25 0.0 0.0 0.0 1.8760038465702804 0.0 26 0.0 0.0 0.0 1.9589703441219677 0.0 27 0.0 0.0 0.0 2.041552440912798 0.0 28 0.0 0.0 0.0 2.124647072051438 0.0 29 0.0 0.0 0.0 2.23202301791756 0.0 30 0.0 0.0 0.0 2.3568251316092104 0.0 31 0.0 0.0 0.0 2.470223356062096 0.0 32 0.0 0.0 0.0 2.5693987523632638 0.0 33 0.0 0.0 0.0 2.6748526944250997 0.0 34 0.0 0.0 0.0 2.7938887967038917 0.0 35 0.0 0.0 0.0 2.9322090038190214 0.0 36 0.0 0.0 0.0 3.057075184304148 0.0 37 0.0 0.0 0.0 3.2040444085385658 0.0 38 0.0 0.0 0.0 3.3454398217405537 0.0 39 0.0 0.0 0.0 3.5445594158646037 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGTACG 40 6.8175723E-9 45.000004 1 GCGTAAG 125 0.0 41.4 1 AATGCGG 215 0.0 40.813953 2 GCGAGAC 185 0.0 40.135136 21 TACGGGA 780 0.0 40.096153 4 CGACCCG 175 0.0 39.857143 32 GCTTGCG 120 0.0 39.374996 1 AGGGCGA 1410 0.0 38.776596 6 ACGGGTA 105 0.0 38.57143 5 CGAGGGA 1280 0.0 38.320316 4 GCACCGA 705 0.0 38.297874 9 CGAACGG 100 0.0 38.25 2 CGACGGT 130 0.0 38.076927 28 CGTTTTT 2670 0.0 37.92135 1 TTCGTAG 95 0.0 37.894737 1 TAGGGAT 3110 0.0 37.83762 5 ATAGGGA 2635 0.0 37.656548 4 CGCATCG 90 0.0 37.500004 21 TAGCGGG 990 0.0 37.5 3 CACGACC 205 0.0 37.317074 27 >>END_MODULE