##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547998_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2576328 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.86660821137681 31.0 31.0 31.0 30.0 33.0 2 31.204449899236433 31.0 31.0 33.0 30.0 34.0 3 31.3395526501284 31.0 31.0 34.0 30.0 34.0 4 35.25568755220608 37.0 35.0 37.0 33.0 37.0 5 35.10089941963911 37.0 35.0 37.0 32.0 37.0 6 35.14810847066057 37.0 35.0 37.0 32.0 37.0 7 35.503940492049146 35.0 35.0 37.0 35.0 37.0 8 35.58150398551737 37.0 35.0 37.0 35.0 37.0 9 37.397320915659805 39.0 37.0 39.0 35.0 39.0 10 36.55950057601361 39.0 35.0 39.0 32.0 39.0 11 36.17884873354635 38.0 35.0 39.0 31.0 39.0 12 35.76949441220217 37.0 35.0 39.0 30.0 39.0 13 35.61033028403216 37.0 35.0 39.0 30.0 39.0 14 36.59429001276235 38.0 35.0 40.0 30.0 41.0 15 36.763566207408374 38.0 35.0 40.0 31.0 41.0 16 36.84947025378756 38.0 35.0 40.0 31.0 41.0 17 36.773455088016746 38.0 35.0 40.0 31.0 41.0 18 36.67052098956344 38.0 35.0 40.0 31.0 41.0 19 36.60187639151537 38.0 35.0 40.0 30.0 41.0 20 36.455080253756506 38.0 35.0 40.0 30.0 41.0 21 36.351097375799974 38.0 35.0 40.0 30.0 41.0 22 36.24325202381063 38.0 34.0 40.0 30.0 41.0 23 36.15274646706475 38.0 34.0 40.0 30.0 41.0 24 36.04001082160346 38.0 34.0 40.0 30.0 41.0 25 35.86134218934856 38.0 34.0 40.0 29.0 41.0 26 35.62078974416301 38.0 34.0 40.0 29.0 41.0 27 35.71018402936272 38.0 34.0 40.0 29.0 41.0 28 35.727731096351086 38.0 34.0 40.0 29.0 41.0 29 35.68636640986707 38.0 34.0 40.0 29.0 41.0 30 35.59178295620744 38.0 34.0 40.0 28.0 41.0 31 35.504191624668906 38.0 34.0 40.0 28.0 41.0 32 35.3603628885763 38.0 34.0 40.0 27.0 41.0 33 35.19122371064554 38.0 34.0 40.0 26.0 41.0 34 34.987133237693335 38.0 34.0 40.0 25.0 41.0 35 34.830027853596285 38.0 33.0 40.0 24.0 41.0 36 34.7594669622812 38.0 33.0 40.0 24.0 41.0 37 34.70377413124416 38.0 33.0 40.0 24.0 41.0 38 34.62234544669778 37.0 33.0 40.0 24.0 41.0 39 34.558722724746225 37.0 33.0 40.0 24.0 41.0 40 34.38861783126993 37.0 33.0 40.0 23.0 41.0 41 34.314191748876695 37.0 33.0 40.0 23.0 41.0 42 34.263366310500835 37.0 33.0 40.0 23.0 41.0 43 34.21850168146292 37.0 33.0 40.0 23.0 41.0 44 34.06842180032977 37.0 33.0 40.0 23.0 41.0 45 33.95339917898653 37.0 33.0 40.0 23.0 41.0 46 33.8985987032707 36.0 33.0 40.0 23.0 41.0 47 33.8502764399564 36.0 33.0 40.0 23.0 41.0 48 33.7426632012694 36.0 32.0 40.0 22.0 41.0 49 33.583409022453665 36.0 32.0 40.0 22.0 41.0 50 33.4803600317972 36.0 32.0 40.0 22.0 41.0 51 33.155721631717704 35.0 31.0 39.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 0.0 10 0.0 11 2.0 12 7.0 13 12.0 14 43.0 15 136.0 16 345.0 17 842.0 18 1765.0 19 3378.0 20 5809.0 21 9064.0 22 13133.0 23 18775.0 24 26387.0 25 36772.0 26 47129.0 27 54854.0 28 61878.0 29 70426.0 30 82845.0 31 99191.0 32 120210.0 33 148413.0 34 211005.0 35 238298.0 36 224607.0 37 277455.0 38 376287.0 39 447195.0 40 64.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.754729987796587 25.258546272058524 28.35492996233399 14.6317937778109 2 30.634104042652954 26.582562468753977 29.402195683158354 13.381137805434712 3 28.740633956545906 26.585822923168166 31.18186038423679 13.491682736049137 4 25.85823699466838 28.76916293267006 30.793051195344688 14.579548877316864 5 23.122133517160858 33.00220313562559 29.704253495672912 14.171409851540643 6 21.96991221614639 41.76265599721775 26.35743585444089 9.909995932194969 7 90.12136653407485 2.886162010427244 5.872233659689295 1.1202377958086083 8 90.65227719451872 2.4144829385078297 5.592183914470518 1.3410559525029422 9 85.48468983762938 5.508925882108179 6.938479882996264 2.0679043972661866 10 40.17500877217497 36.59619427339997 12.821504094199184 10.407292860225873 11 30.889739194698812 25.32464810381287 26.549375700609552 17.23623700087877 12 30.244130405755786 23.4290820112967 27.82378641228912 18.503001170658393 13 24.837016094224026 26.695863259647062 28.79008418182778 19.67703646430113 14 20.047796709114678 29.134760791327814 30.6571989280868 20.160243571470712 15 20.21221676743023 26.366402104079917 34.915740542353305 18.505640586136547 16 24.0175940330579 24.98676410767573 32.626008800121724 18.369633059144643 17 23.805703311069088 24.823236792830727 28.8334016476163 22.53765824848389 18 24.25087178340646 25.581175999329275 30.321372123425277 19.846580093838984 19 26.601154821901556 26.88178679112287 27.008944513276262 19.508113873699312 20 27.764050229629145 26.954487161572594 27.332661058685076 17.948801550113185 21 26.31116845370621 26.20326293856993 29.349019224260264 18.136549383463596 22 25.37149772855009 23.3843672079021 29.174662542968132 22.069472520579676 23 23.039884673069576 27.109087041712083 28.908392099142656 20.942636186075685 24 23.101445157604157 25.851133861837468 31.50449011150754 19.542930869050835 25 23.178880949941156 27.250101695125778 28.9435196139622 20.62749774097087 26 21.80793749864148 29.726028673367676 27.25254703593642 21.21348679205443 27 20.594815566961973 29.155099816482995 29.625497995596834 20.6245866209582 28 20.42725149903273 28.219077695076095 31.26445856272959 20.089212243161587 29 21.296667194549762 26.853684779267233 31.091538033977038 20.758109992205963 30 21.89923022223878 27.04729366757649 30.286399868339746 20.767076241844983 31 24.592870162494837 26.801633953440714 27.995930642371626 20.609565241692827 32 25.71524277964607 26.96554941762074 27.765408752301724 19.55379905043147 33 25.084111960899392 27.221029309932586 27.23601187426446 20.458846854903566 34 22.020177555031815 27.34845873662049 29.44493092494434 21.186432783403355 35 21.930437428774596 27.94166736533547 29.019247549225096 21.108647656664832 36 24.584524951791852 27.911741051605233 27.0251303405467 20.478603656056215 37 22.229622936209985 29.193138451315203 27.62850848183927 20.94873013063554 38 22.606515940516893 29.61435810968169 26.55911824891862 21.220007700882807 39 22.14457941690654 28.66020941432923 26.95728183678476 22.23792933197947 40 24.04177573662981 26.922154321965213 27.55611863085756 21.479951310547417 41 20.79471247449859 26.851744032592123 28.382061600852065 23.971481892057223 42 22.215882449750186 27.299435475607144 27.1042739899578 23.38040808468487 43 21.877687934145033 26.924483217975354 27.97799814309358 23.219830704786038 44 21.959276924366772 27.71921898143404 28.112297813011388 22.2092062811878 45 21.364981477513734 28.550013818116327 27.453491946677598 22.63151275769234 46 21.81624389441096 28.691494250732045 27.339376042180962 22.152885812676026 47 21.38660139547449 27.80779465968619 28.37849062696986 22.427113317869463 48 22.25170863337277 26.990390975062184 29.078362692949035 21.679537698616013 49 22.42462916212532 26.609189513136528 29.046379187743177 21.919802136994978 50 20.917484109166224 28.841087004449744 28.31013752907239 21.931291357311647 51 20.501310392155037 28.980316170922336 28.06556463307467 22.452808803847958 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2033.0 1 2468.5 2 2904.0 3 14375.0 4 25846.0 5 19968.5 6 14091.0 7 13164.5 8 12238.0 9 12556.0 10 12874.0 11 12889.0 12 12904.0 13 12803.0 14 12702.0 15 12688.0 16 12674.0 17 12278.5 18 11883.0 19 11753.5 20 11624.0 21 12125.0 22 12626.0 23 14405.5 24 16185.0 25 18242.0 26 23295.0 27 26291.0 28 32489.5 29 38688.0 30 43491.0 31 48294.0 32 57235.5 33 66177.0 34 73275.5 35 80374.0 36 89004.5 37 97635.0 38 107247.0 39 116859.0 40 128385.0 41 139911.0 42 153833.5 43 167756.0 44 172631.5 45 177507.0 46 179451.5 47 181396.0 48 185866.0 49 190336.0 50 181490.5 51 172645.0 52 165113.0 53 157581.0 54 148821.5 55 140062.0 56 133483.5 57 126905.0 58 121160.5 59 115416.0 60 106266.5 61 97117.0 62 87535.5 63 77954.0 64 67920.0 65 57886.0 66 49448.5 67 41011.0 68 34309.0 69 27607.0 70 23442.5 71 19278.0 72 15950.5 73 12623.0 74 10564.0 75 6397.5 76 4290.0 77 3331.5 78 2373.0 79 1913.0 80 1453.0 81 1127.5 82 802.0 83 586.5 84 371.0 85 269.0 86 167.0 87 131.5 88 96.0 89 71.0 90 46.0 91 32.5 92 19.0 93 14.5 94 10.0 95 7.0 96 4.0 97 2.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2576328.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 21.52135866002588 #Duplication Level Percentage of deduplicated Percentage of total 1 74.18852173831563 15.966377847874172 2 6.159416222211696 2.6511801130919914 3 2.500747323813664 1.614584402216812 4 1.6006919618584332 1.377962632615032 5 1.1852740851989272 1.2754354349000092 6 0.9248848773997833 1.194286749945288 7 0.7804227335665467 1.1757030288866428 8 0.6893784733092777 1.1869089101272035 9 0.6531748329682359 1.265148886321071 >10 9.949695983905709 51.657084592696926 >50 1.3086632823021018 17.84960915983895 >100 0.056726658545979636 1.82264336517819 >500 0.0014780471409499205 0.2124482500355885 >1k 7.390235704749602E-4 0.19081773384255837 >5k 0.0 0.0 >10k+ 1.8475589261874006E-4 0.5598088924295435 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 14079 0.5464754487782612 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.01696212594048584 0.0 2 0.0 0.0 0.0 0.05104163755546654 0.0 3 0.0 0.0 0.0 0.08698426597855552 0.0 4 0.0 0.0 0.0 0.15425054573796504 0.0 5 0.0 0.0 0.0 0.26852170996860647 0.0 6 0.0 0.0 0.0 0.535684897264634 0.0 7 0.0 0.0 0.0 0.6613288370114364 0.0 8 0.0 0.0 0.0 0.9182836967963707 0.0 9 0.0 0.0 0.0 1.0626752494247627 0.0 10 0.0 0.0 0.0 1.2506947873096903 0.0 11 0.0 0.0 0.0 1.4408491465372422 0.0 12 0.0 0.0 0.0 1.5869097413062312 0.0 13 0.0 0.0 0.0 1.6736999326172755 0.0 14 0.0 0.0 0.0 1.7347170080828218 0.0 15 0.0 0.0 0.0 1.7856422008377815 0.0 16 0.0 0.0 0.0 1.865018739849895 0.0 17 0.0 0.0 0.0 1.9515760415599257 0.0 18 0.0 0.0 0.0 2.0492732291851037 0.0 19 0.0 0.0 0.0 2.12337093724091 0.0 20 0.0 0.0 0.0 2.2012336938464356 0.0 21 3.881493350225592E-5 0.0 0.0 2.2953210926559042 0.0 22 3.881493350225592E-5 0.0 0.0 2.403614757127198 0.0 23 3.881493350225592E-5 0.0 0.0 2.5221555640430875 0.0 24 3.881493350225592E-5 0.0 0.0 2.6204349756707996 0.0 25 3.881493350225592E-5 0.0 0.0 2.7126204427386575 0.0 26 3.881493350225592E-5 0.0 0.0 2.8066690266146237 0.0 27 3.881493350225592E-5 0.0 0.0 2.9049096233088334 0.0 28 3.881493350225592E-5 0.0 0.0 3.002218661598989 0.0 29 3.881493350225592E-5 0.0 0.0 3.1147043388885267 0.0 30 3.881493350225592E-5 0.0 0.0 3.2403870935688315 0.0 31 3.881493350225592E-5 0.0 0.0 3.358500936216196 0.0 32 3.881493350225592E-5 0.0 0.0 3.4753727009914885 0.0 33 3.881493350225592E-5 0.0 0.0 3.5881688977490445 0.0 34 3.881493350225592E-5 0.0 0.0 3.713812837495847 0.0 35 3.881493350225592E-5 0.0 0.0 3.8483453970146657 0.0 36 3.881493350225592E-5 0.0 0.0 3.97849186904773 0.0 37 3.881493350225592E-5 0.0 0.0 4.121059119801516 0.0 38 3.881493350225592E-5 0.0 0.0 4.284237100245 0.0 39 3.881493350225592E-5 0.0 0.0 4.513827431910844 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTAGG 345 0.0 42.391304 2 GTTTACG 60 3.6379788E-12 41.249996 1 CGTTTTT 9500 0.0 40.973686 1 GGGCGAT 4170 0.0 38.201435 7 AGGGCGA 2325 0.0 38.03226 6 TAGGGAT 4345 0.0 38.009205 5 CGACGGT 145 0.0 37.24138 28 TAGGGAC 3070 0.0 37.0114 5 ATAGGGA 3925 0.0 36.9172 4 AGGGATT 4910 0.0 36.843178 6 ACGGGAT 1360 0.0 36.72794 5 GGCGATT 1055 0.0 36.682465 8 AAGGGAT 4510 0.0 36.618626 5 CGTAAGG 455 0.0 36.59341 2 TAAGGGA 3790 0.0 36.451187 4 TACGGGA 1105 0.0 36.447964 4 AAGGGCG 1075 0.0 36.418606 5 TATGGGA 3295 0.0 36.396053 4 AGGGATG 5095 0.0 36.211975 6 TTAGGGA 3980 0.0 36.124374 4 >>END_MODULE