##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547997_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2264307 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.822599144020664 31.0 31.0 31.0 30.0 33.0 2 31.174429085808594 31.0 31.0 33.0 30.0 34.0 3 31.369586809562485 31.0 31.0 34.0 30.0 34.0 4 35.23127561766139 35.0 35.0 37.0 33.0 37.0 5 35.0386078389547 35.0 35.0 37.0 32.0 37.0 6 35.07072627519148 37.0 35.0 37.0 32.0 37.0 7 35.45778907188822 35.0 35.0 37.0 35.0 37.0 8 35.529373887904775 37.0 35.0 37.0 35.0 37.0 9 37.339330311658266 39.0 37.0 39.0 35.0 39.0 10 36.459573282244854 38.0 35.0 39.0 32.0 39.0 11 36.065135602195284 38.0 35.0 39.0 31.0 39.0 12 35.321905554326335 37.0 35.0 39.0 30.0 39.0 13 34.9189526861861 37.0 34.0 39.0 27.0 39.0 14 35.87814108245922 38.0 34.0 40.0 27.0 41.0 15 36.18098296741564 38.0 34.0 40.0 30.0 41.0 16 36.36387689478503 38.0 35.0 40.0 31.0 41.0 17 36.29576201460314 38.0 34.0 40.0 30.0 41.0 18 36.22587308169784 38.0 35.0 40.0 30.0 41.0 19 36.15487034222833 38.0 34.0 40.0 30.0 41.0 20 36.01477273178946 38.0 34.0 40.0 30.0 41.0 21 35.859779614690055 37.0 34.0 40.0 29.0 41.0 22 35.7238620911387 37.0 34.0 40.0 29.0 41.0 23 35.68604654757504 37.0 34.0 40.0 29.0 41.0 24 35.54601694911511 37.0 34.0 40.0 29.0 41.0 25 35.36842883937558 37.0 34.0 40.0 28.0 41.0 26 35.09849282804849 37.0 34.0 40.0 27.0 41.0 27 35.153314457800995 37.0 34.0 40.0 27.0 41.0 28 35.209233995213545 37.0 34.0 40.0 27.0 41.0 29 35.17627247541963 37.0 34.0 40.0 27.0 41.0 30 35.13046994069267 37.0 34.0 40.0 27.0 41.0 31 35.003395740948555 37.0 33.0 40.0 27.0 41.0 32 34.86038686450203 36.0 33.0 40.0 26.0 41.0 33 34.73110713344083 36.0 33.0 40.0 26.0 41.0 34 34.611906424349705 36.0 33.0 40.0 25.0 41.0 35 34.49034958598812 36.0 33.0 40.0 24.0 41.0 36 34.406780087682456 36.0 33.0 40.0 24.0 41.0 37 34.322543277037965 36.0 33.0 40.0 24.0 41.0 38 34.26648771566753 36.0 33.0 40.0 24.0 41.0 39 34.23435249725413 36.0 33.0 40.0 24.0 41.0 40 33.989939085115225 36.0 33.0 40.0 23.0 41.0 41 33.94118907021 36.0 33.0 40.0 23.0 41.0 42 33.87776613330259 36.0 33.0 40.0 23.0 41.0 43 33.81922990124572 35.0 33.0 40.0 23.0 41.0 44 33.66179497744785 35.0 32.0 40.0 23.0 41.0 45 33.5266626831079 35.0 32.0 40.0 23.0 41.0 46 33.47344860922128 35.0 32.0 39.0 23.0 41.0 47 33.40917728912201 35.0 32.0 39.0 23.0 41.0 48 33.3159152005448 35.0 32.0 39.0 22.0 41.0 49 33.182550776021095 35.0 32.0 39.0 22.0 41.0 50 33.03979098240654 35.0 31.0 39.0 21.0 41.0 51 32.668832009087104 35.0 31.0 39.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 0.0 11 0.0 12 1.0 13 11.0 14 44.0 15 126.0 16 366.0 17 918.0 18 1938.0 19 3450.0 20 5889.0 21 8889.0 22 12837.0 23 18257.0 24 25274.0 25 33599.0 26 42081.0 27 49755.0 28 58335.0 29 68464.0 30 81237.0 31 96943.0 32 117117.0 33 146499.0 34 220924.0 35 252911.0 36 182348.0 37 219523.0 38 286673.0 39 329867.0 40 29.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.15195642640331 25.865397227496096 28.821312657691735 13.16133368840886 2 30.247444361564046 26.636803225004385 29.413458510705482 13.702293902726087 3 29.528681402301014 26.807583953942643 30.00745923587217 13.656275407884177 4 25.95633012661269 28.901337142004152 29.12016789242801 16.022164838955142 5 22.49995252410561 33.541211505330324 28.601775289304854 15.35706068125921 6 22.34507069933538 41.32964302102145 26.163810826005484 10.161475453637692 7 90.13799807181624 3.6565271405335054 4.819178671443404 1.386296116206857 8 90.62737517483274 2.8698405295748324 4.292571634500092 2.2102126610923345 9 85.47060977155483 5.605114500816365 6.405271016695174 2.519004710933632 10 45.29363730271558 30.768486782048548 12.096195436396213 11.841680478839663 11 39.36250693920921 23.195220436098108 21.68380877681339 15.758463847879284 12 36.071610430917715 21.778230602122413 24.71807047365927 17.432088493300597 13 24.063433094540628 32.800587552836255 25.878072187207827 17.25790716541529 14 18.987001320933956 35.50662520585768 27.58296467749294 17.923408795715424 15 17.53649129733733 25.781883816991247 39.21946096531963 17.462163920351788 16 20.586431080237794 22.410388697292372 38.13126930226334 18.871910920206492 17 21.101908884263484 23.01410541945063 26.659105854462318 29.22487984182357 18 23.08516468835719 25.11841371333481 30.954548124437192 20.841873473870816 19 28.330036518899604 26.260484996071646 24.588759386425956 20.820719098602797 20 29.668856740715814 25.707556440005707 24.485239854843005 20.138346964435478 21 25.013657600316563 27.56772822766524 27.622093647195367 19.796520524822828 22 24.637913498478785 23.47936918447896 26.383833994241947 25.49888332280031 23 21.870665064410435 28.712581818631485 25.462006697855017 23.954746419103063 24 21.968619979534576 25.769871311619845 33.414991871685245 18.846516837160333 25 21.535639822691888 26.118543112749286 30.47161891033327 21.874198154225553 26 20.07201320315664 32.135880867744525 25.380215668635035 22.4118902604638 27 20.25515974644781 31.161498860357717 28.12975449000511 20.453586903189365 28 18.52853875379973 28.148921502252122 33.049140421329795 20.273399322618353 29 19.203226417619167 25.452246537240754 32.796480335926184 22.5480467092139 30 21.38080216154435 27.959547888161808 29.86202842635738 20.797621523936463 31 27.129713417836008 26.72367307083359 25.308979745237725 20.837633766092672 32 27.208501320713136 25.80798451800043 26.105868153037555 20.87764600824888 33 26.53266540270379 26.537258419463438 25.574844753825342 21.355231424007435 34 21.23369313436738 26.75644247886881 27.67919721133221 24.3306671754316 35 20.16692082831524 26.28808726025225 30.034443209335134 23.510548702097374 36 27.882659021060306 25.325099467519202 25.80065335663406 20.99158815478643 37 21.396745229335068 29.574523242652166 28.067483782013657 20.961247745999106 38 21.796426014670274 30.234681074606932 24.496854887610205 23.47203802311259 39 21.492182817965936 28.72817157744069 26.923027663651617 22.856617940941753 40 23.977843993769397 25.49239127026503 26.941885530539807 23.587879205425764 41 19.538958277300736 24.21257364836129 28.422294326696868 27.826173747641107 42 22.73940768632522 25.986228899173124 25.511160809907846 25.76320260459381 43 21.92215984846578 25.197466597948072 27.72252172519009 25.157851828396062 44 21.020736145761155 27.436694759147056 28.338825079814704 23.20374401527708 45 19.89734607542175 31.320664556528776 25.36228523782332 23.419704130226158 46 23.419527475735403 27.848520540721733 26.702430368320197 22.029521615222674 47 22.07253698372173 26.85152675851817 27.363868945332943 23.712067312427155 48 22.744751484670587 25.13894979788518 29.609324177331075 22.506974540113156 49 22.31587854473797 24.294320513958574 30.14962193730797 23.240179003995483 50 20.88537464221945 28.52104418702941 28.161773116454615 22.431808054296525 51 19.81612917329673 29.784874577519744 26.10003855484261 24.298957694340917 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2053.0 1 2693.0 2 3333.0 3 6931.5 4 10530.0 5 8493.5 6 6457.0 7 6422.5 8 6388.0 9 6973.0 10 7558.0 11 7871.0 12 8184.0 13 8311.0 14 8438.0 15 8813.5 16 9189.0 17 8837.5 18 8486.0 19 9002.0 20 9518.0 21 9514.0 22 9510.0 23 10064.0 24 10618.0 25 11827.5 26 15564.0 27 18091.0 28 23132.5 29 28174.0 30 31176.0 31 34178.0 32 42263.5 33 50349.0 34 52600.5 35 54852.0 36 60782.5 37 66713.0 38 78227.0 39 89741.0 40 111043.5 41 132346.0 42 152770.0 43 173194.0 44 180282.0 45 187370.0 46 191688.5 47 196007.0 48 193366.5 49 190726.0 50 179051.5 51 167377.0 52 154330.5 53 141284.0 54 128430.0 55 115576.0 56 110219.5 57 104863.0 58 96952.5 59 89042.0 60 85225.5 61 81409.0 62 74073.5 63 66738.0 64 59270.0 65 51802.0 66 44018.5 67 36235.0 68 30385.5 69 24536.0 70 20876.0 71 17216.0 72 15362.0 73 13508.0 74 11211.0 75 6926.0 76 4938.0 77 4022.5 78 3107.0 79 2242.0 80 1377.0 81 1030.5 82 684.0 83 493.0 84 302.0 85 265.0 86 228.0 87 150.5 88 73.0 89 53.5 90 34.0 91 25.5 92 17.0 93 11.5 94 6.0 95 3.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2264307.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.865926328341477 #Duplication Level Percentage of deduplicated Percentage of total 1 79.94984814195337 15.88277793150134 2 7.268477427721725 2.8879007419666545 3 2.2989433268887187 1.3701191629501064 4 1.169211083292591 0.9290984497188378 5 0.7234661992976141 0.7186163108145807 6 0.5255673275643209 0.6264529085985666 7 0.39412406087120866 0.5480747690245942 8 0.3124295060164026 0.4965361239457579 9 0.24751235939643973 0.4425356067411285 >10 4.093888882649201 21.208126817171593 >50 2.170251568713726 31.081875269782422 >100 0.8392277816369158 22.177650876225616 >500 0.004549892901850107 0.6021637713597667 >1k 0.0022749464509250533 0.7961812638880976 >5k 2.2749464509250528E-4 0.23188999631093993 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5131 0.22660354801711957 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 3384 0.14944969917948406 No Hit GAGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT 2490 0.10996742049554234 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.03881982434360712 0.0 2 0.0 0.0 0.0 0.17612452728362366 0.0 3 0.0 0.0 0.0 0.27200375214138367 0.0 4 0.0 0.0 0.0 0.5773510394129417 0.0 5 0.0 0.0 0.0 0.9819781504893108 0.0 6 0.0 0.0 0.0 1.5976190507735921 0.0 7 0.0 0.0 0.0 1.8355284861990888 0.0 8 0.0 0.0 0.0 2.4052392188868383 0.0 9 0.0 0.0 0.0 2.5689096045721715 0.0 10 0.0 0.0 0.0 2.855664006691672 0.0 11 0.0 0.0 0.0 3.278486530315898 0.0 12 0.0 0.0 0.0 3.602073393758002 0.0 13 0.0 0.0 0.0 3.7523180381458876 0.0 14 0.0 0.0 0.0 3.8219199075037085 0.0 15 0.0 0.0 0.0 3.9081714626152726 0.0 16 0.0 0.0 0.0 4.07767144649555 0.0 17 0.0 0.0 0.0 4.262672861939658 0.0 18 0.0 0.0 0.0 4.496342589587012 0.0 19 0.0 0.0 0.0 4.626669440142171 0.0 20 0.0 0.0 0.0 4.765343215385546 0.0 21 0.0 0.0 0.0 4.958559064649802 0.0 22 0.0 0.0 0.0 5.161844219887144 0.0 23 0.0 0.0 0.0 5.383722260276544 0.0 24 0.0 0.0 0.0 5.5506607540408615 0.0 25 0.0 0.0 0.0 5.691896019400196 0.0 26 0.0 0.0 0.0 5.827566668300721 0.0 27 0.0 0.0 0.0 5.959395082027305 0.0 28 0.0 0.0 0.0 6.103103510257222 0.0 29 0.0 0.0 0.0 6.261120952238367 0.0 30 0.0 0.0 0.0 6.459503945357233 0.0 31 0.0 0.0 0.0 6.635319327282033 0.0 32 0.0 0.0 0.0 6.798945549344678 0.0 33 0.0 0.0 0.0 6.966237352090507 0.0 34 0.0 0.0 0.0 7.134324100044738 0.0 35 0.0 0.0 0.0 7.344233798685425 0.0 36 0.0 0.0 0.0 7.514926200378306 0.0 37 0.0 0.0 0.0 7.704167323600554 0.0 38 0.0 0.0 0.0 7.897074027505988 0.0 39 0.0 0.0 0.0 8.151765639553293 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTAGCA 20 7.034738E-4 45.0 39 ACCGTAC 20 7.034738E-4 45.0 14 TACGTCC 20 7.034738E-4 45.0 28 CGAACTA 45 1.9297659E-8 40.000004 32 CGGTCTA 280 0.0 39.375 31 TATGGGC 700 0.0 38.571426 4 CGGTAGT 480 0.0 38.437504 12 ACGGGAT 805 0.0 38.291924 5 CGCATCG 165 0.0 38.181816 21 TTAATCG 65 9.094947E-12 38.076927 20 CTCACGA 290 0.0 38.017242 24 TACGGGA 680 0.0 37.72059 4 ATAACGC 185 0.0 37.7027 11 GACGTAG 90 0.0 37.500004 1 CAATACG 90 0.0 37.500004 1 GGGCGAT 3435 0.0 37.40175 7 TAGGGAC 1945 0.0 37.133675 5 AGGGCGA 1845 0.0 36.82927 6 CGACGGT 295 0.0 36.61017 28 CGCATGG 260 0.0 36.346157 2 >>END_MODULE