##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547995_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2423538 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.832602170875802 31.0 31.0 31.0 30.0 33.0 2 31.181788360652895 31.0 31.0 33.0 30.0 34.0 3 31.368744372896153 31.0 31.0 34.0 30.0 34.0 4 35.246342743542705 37.0 35.0 37.0 33.0 37.0 5 35.061983760931334 35.0 35.0 37.0 32.0 37.0 6 35.08774815992157 37.0 35.0 37.0 32.0 37.0 7 35.4667923506873 35.0 35.0 37.0 35.0 37.0 8 35.53841903861215 37.0 35.0 37.0 35.0 37.0 9 37.337214436084764 39.0 37.0 39.0 35.0 39.0 10 36.48168008919192 38.0 35.0 39.0 32.0 39.0 11 36.12619566930661 38.0 35.0 39.0 31.0 39.0 12 35.56225774054296 37.0 35.0 39.0 30.0 39.0 13 35.304369067041655 37.0 35.0 39.0 30.0 39.0 14 36.27606457996532 38.0 35.0 40.0 30.0 41.0 15 36.48083463102291 38.0 35.0 40.0 30.0 41.0 16 36.58246497476004 38.0 35.0 40.0 31.0 41.0 17 36.499240779389474 38.0 35.0 40.0 30.0 41.0 18 36.42512516824576 38.0 35.0 40.0 30.0 41.0 19 36.362201046569105 38.0 35.0 40.0 30.0 41.0 20 36.244706705651 38.0 34.0 40.0 30.0 41.0 21 36.10883881333819 38.0 34.0 40.0 30.0 41.0 22 35.99358458584103 38.0 34.0 40.0 30.0 41.0 23 35.916483669742334 38.0 34.0 40.0 29.0 41.0 24 35.78501471815173 38.0 34.0 40.0 29.0 41.0 25 35.592901369815536 37.0 34.0 40.0 29.0 41.0 26 35.352034504926266 37.0 34.0 40.0 27.0 41.0 27 35.43399154459307 37.0 34.0 40.0 27.0 41.0 28 35.45638195068532 37.0 34.0 40.0 27.0 41.0 29 35.432416161826225 37.0 34.0 40.0 28.0 41.0 30 35.34635891824267 37.0 34.0 40.0 27.0 41.0 31 35.25397414853821 37.0 34.0 40.0 27.0 41.0 32 35.13127295713952 37.0 34.0 40.0 27.0 41.0 33 34.99311213605893 37.0 33.0 40.0 26.0 41.0 34 34.79283345258048 37.0 33.0 40.0 25.0 41.0 35 34.684112648532846 37.0 33.0 40.0 24.0 41.0 36 34.607563405236476 37.0 33.0 40.0 24.0 41.0 37 34.55841253572257 37.0 33.0 40.0 24.0 41.0 38 34.481423852235864 37.0 33.0 40.0 24.0 41.0 39 34.445510654258364 37.0 33.0 40.0 24.0 41.0 40 34.24080992334348 37.0 33.0 40.0 23.0 41.0 41 34.15367821754806 37.0 33.0 40.0 23.0 41.0 42 34.110266890801796 36.0 33.0 40.0 23.0 41.0 43 34.054885048222886 36.0 33.0 40.0 23.0 41.0 44 33.89567731143477 36.0 33.0 40.0 23.0 41.0 45 33.75740755870137 36.0 32.0 40.0 23.0 41.0 46 33.69176468452321 36.0 32.0 40.0 23.0 41.0 47 33.62732500996477 35.0 32.0 40.0 23.0 41.0 48 33.5277123775241 35.0 32.0 40.0 23.0 41.0 49 33.38801784828627 35.0 32.0 39.0 22.0 41.0 50 33.2674362852986 35.0 32.0 39.0 22.0 41.0 51 32.93127155423187 35.0 31.0 39.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 3.0 11 2.0 12 7.0 13 19.0 14 61.0 15 152.0 16 358.0 17 929.0 18 1973.0 19 3611.0 20 5927.0 21 9036.0 22 13089.0 23 18621.0 24 25813.0 25 34542.0 26 43718.0 27 51440.0 28 60051.0 29 70336.0 30 83491.0 31 98983.0 32 119648.0 33 148993.0 34 214271.0 35 238427.0 36 210529.0 37 255526.0 38 334472.0 39 379462.0 40 47.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.93596469294065 24.984423598887247 27.9070515915162 13.172560116655898 2 30.468926008174822 27.247148590201597 28.59505400781832 13.688871393805254 3 30.06253667159335 26.706368953158567 29.536033682987433 13.695060692260656 4 26.518090494145337 29.147180692029583 29.159270455012464 15.175458358812612 5 23.788651137304225 33.20521485530658 28.458394297923117 14.547739709466079 6 22.062950941969962 42.03556948560328 25.513484830854726 10.387994741572031 7 90.72512995463656 3.308468858338512 4.682245543498802 1.2841556435261177 8 91.03480118735501 2.8996450643645777 4.411525629059664 1.6540281192207424 9 85.73346075035754 5.868940367347242 6.031512606775713 2.366086275519509 10 40.84644020436238 36.303907757996775 11.543743073143478 11.305908964497359 11 36.1722407488556 25.03385546255103 22.848703011877678 15.945200776715692 12 33.19506440583972 22.890583931425873 25.705064249044167 18.209287413690234 13 25.759199979534053 28.5776414481638 26.879545523940617 18.783613048361527 14 20.76798465714175 31.140506152575288 28.866434114092705 19.225075076190265 15 20.714963000373835 25.268925017887074 35.37848385294557 18.637628128793523 16 24.471784638821426 24.121222774307643 32.7490635591437 18.65792902772723 17 24.203994325651177 23.88194449602193 27.270214042445385 24.643847135881508 18 25.39729106785204 24.870334197359398 29.34400038291126 20.388374351877296 19 28.03285939811961 26.315741696643503 25.09768776062104 20.553711144615846 20 30.120427243146175 26.405527786236487 24.83356976453433 18.640475206083007 21 27.197056534702575 26.408209815567158 27.59044834452771 18.80428530520256 22 26.3731371243199 23.390514198663276 27.650443277555375 22.58590539946145 23 23.9280341385198 26.998297530304864 26.84773252987987 22.225935801295464 24 23.590346014793248 25.753918444852115 30.492321556336233 20.163413984018405 25 23.552550032225614 26.21031731295321 28.654553796969555 21.58257885785162 26 22.053997090204486 29.867037364382153 26.286404421964914 21.792561123448444 27 21.723447290696495 28.687068244855247 27.938534489659332 21.650949974788926 28 20.84225623860653 27.93160247538929 30.76147351516667 20.46466777083751 29 22.16243359914307 26.01180588049373 30.405217496073924 21.42054302428928 30 23.094170588618788 26.689905419267202 29.1597655988889 21.05615839322511 31 26.570121863160388 26.689410275390774 26.36884587739082 20.371621984058017 32 27.671651940262542 26.257933649070083 26.05298534621698 20.017429064450404 33 26.88045328771408 26.48941341130199 25.631948003291054 20.998185297692878 34 22.721946179511114 27.617598733752057 27.88897884002644 21.77147624671039 35 22.645363926622977 27.624737057970624 27.828364977153235 21.901534038253164 36 26.572886416470464 27.43299259182237 25.567455513385802 20.42666547832136 37 23.192250338142006 29.322007742399748 26.089295897155317 21.396446022302932 38 23.146160695644134 30.614457045856096 24.576631354655877 21.662750903843882 39 23.093675444742356 28.41383134904425 25.632030527270462 22.860462678942934 40 24.70706050410598 26.052077582443516 26.453102860363646 22.78775905308685 41 21.220174802293176 25.65608626726711 27.30326489619721 25.8204740342425 42 23.12986220971159 26.451163546847624 25.963240518613695 24.45573372482709 43 22.371384314997332 25.732998616072866 27.285893598532397 24.60972347039741 44 22.056018927699917 26.88032950174497 27.49888798937751 23.5647635811776 45 21.8166581254348 29.02954275938731 26.03549026258305 23.118308852594843 46 23.131017545423262 28.15437595779394 26.340952772351827 22.373653724430977 47 22.114033285221854 27.28040575390194 27.36313604325577 23.24242491762044 48 22.837768584606472 25.939803708462588 28.870312741124753 22.352114965806187 49 23.35420364772494 25.939143516627343 28.156480319268773 22.550172516378947 50 21.6738916410636 28.31727829314003 27.25568982207005 22.75314024372632 51 21.140786734105262 28.977387604403148 26.720563077616276 23.16126258387531 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1930.0 1 2414.5 2 2899.0 3 8673.5 4 14448.0 5 11347.5 6 8247.0 7 8064.0 8 7881.0 9 8379.0 10 8877.0 11 9063.0 12 9249.0 13 9228.5 14 9208.0 15 9314.0 16 9420.0 17 9553.0 18 9686.0 19 9692.5 20 9699.0 21 10100.5 22 10502.0 23 11385.0 24 12268.0 25 14420.5 26 19891.0 27 23209.0 28 27314.5 29 31420.0 30 36344.0 31 41268.0 32 45182.5 33 49097.0 34 57756.0 35 66415.0 36 72042.0 37 77669.0 38 87412.0 39 97155.0 40 110812.5 41 124470.0 42 144802.5 43 165135.0 44 169483.0 45 173831.0 46 174761.0 47 175691.0 48 177567.0 49 179443.0 50 173342.5 51 167242.0 52 157772.0 53 148302.0 54 141120.0 55 133938.0 56 129095.0 57 124252.0 58 120952.0 59 117652.0 60 110416.0 61 103180.0 62 93415.5 63 83651.0 64 75210.5 65 66770.0 66 56488.5 67 46207.0 68 39646.5 69 33086.0 70 28163.0 71 23240.0 72 19801.5 73 16363.0 74 13461.0 75 8396.0 76 6233.0 77 4817.0 78 3401.0 79 2664.0 80 1927.0 81 1442.0 82 957.0 83 708.0 84 459.0 85 342.0 86 225.0 87 169.0 88 113.0 89 81.5 90 50.0 91 36.5 92 23.0 93 17.0 94 11.0 95 8.5 96 6.0 97 3.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2423538.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.9929999610289 #Duplication Level Percentage of deduplicated Percentage of total 1 77.51269334944399 16.272239684641228 2 6.161397224941539 2.5869242340616263 3 2.3425293559262954 1.4753015603300936 4 1.2890921050582893 1.0824764204500534 5 0.8762359835219397 0.91974109839641 6 0.672748035836169 0.847379969405458 7 0.5607790516034186 0.8240704225919474 8 0.4778556500094881 0.80252989136213 9 0.4262236456368116 0.8052941678618866 >10 7.4553264072590855 39.67884661661342 >50 2.044890540352363 28.866343332547988 >100 0.17660397276978856 4.924343275145021 >500 0.0022150807805033073 0.3003131445530054 >1k 0.0012082258802745313 0.3062737517295219 >5k 2.0137098004575522E-4 0.30792243031026056 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7284 0.3005523329941598 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.017742655572142874 0.0 2 0.0 0.0 0.0 0.05685902181026252 0.0 3 0.0 0.0 0.0 0.08920842173714627 0.0 4 0.0 0.0 0.0 0.19397261359219456 0.0 5 0.0 0.0 0.0 0.34362985024373455 0.0 6 0.0 0.0 0.0 0.6903543497151685 0.0 7 0.0 0.0 0.0 0.8273028935382899 0.0 8 4.126198970265785E-5 0.0 0.0 1.1632992756870328 0.0 9 4.126198970265785E-5 0.0 0.0 1.3044152804701226 0.0 10 4.126198970265785E-5 0.0 0.0 1.5225674200280745 0.0 11 4.126198970265785E-5 0.0 0.0 1.7655592773870268 0.0 12 4.126198970265785E-5 0.0 0.0 1.9459154343773442 0.0 13 4.126198970265785E-5 0.0 0.0 2.055342231068793 0.0 14 4.126198970265785E-5 0.0 0.0 2.116946381694861 0.0 15 4.126198970265785E-5 0.0 0.0 2.17685879074312 0.0 16 4.126198970265785E-5 0.0 0.0 2.272669130832692 0.0 17 4.126198970265785E-5 0.0 0.0 2.3849430048136235 0.0 18 0.0030946492276993386 0.0 0.0 2.514216818552051 0.0 19 0.0030946492276993386 0.0 0.0 2.606561151506599 0.0 20 0.0030946492276993386 0.0 0.0 2.705713712762086 0.0 21 0.0030946492276993386 0.0 0.0 2.8239293132602006 0.0 22 0.0030946492276993386 0.0 0.0 2.956999230051272 0.0 23 0.0030946492276993386 0.0 0.0 3.1051710350735164 0.0 24 0.0030946492276993386 0.0 0.0 3.224748281231819 0.0 25 0.0030946492276993386 0.0 0.0 3.333803720015944 0.0 26 0.0030946492276993386 0.0 0.0 3.4436431366044187 0.0 27 0.0030946492276993386 0.0 0.0 3.5559995345647564 0.0 28 0.0030946492276993386 0.0 0.0 3.6737612531761417 0.0 29 0.0030946492276993386 0.0 0.0 3.8007656574809223 0.0 30 0.0030946492276993386 0.0 0.0 3.961934989259504 0.0 31 0.0030946492276993386 0.0 0.0 4.110808248106694 0.0 32 0.0030946492276993386 0.0 0.0 4.247344172032788 0.0 33 0.0030946492276993386 0.0 0.0 4.394113069405142 0.0 34 0.0030946492276993386 0.0 0.0 4.539190225199687 0.0 35 0.0030946492276993386 0.0 0.0 4.707621667165936 0.0 36 0.0030946492276993386 0.0 0.0 4.866108969613846 0.0 37 0.0030946492276993386 0.0 0.0 5.027113253433616 0.0 38 0.0030946492276993386 0.0 0.0 5.225335851965185 0.0 39 0.0030946492276993386 0.0 0.0 5.511817846470739 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCGTCGA 25 3.89209E-5 45.0 34 TCGATAG 110 0.0 40.90909 1 TAGGGCG 825 0.0 39.545452 5 CGTTTTT 5395 0.0 38.702503 1 CAATCGA 35 6.251157E-6 38.571426 32 ACGGGAT 965 0.0 38.4715 5 GGGCGAT 4175 0.0 38.317368 7 AGGGCGA 1940 0.0 37.92526 6 ATAGGGC 1040 0.0 37.644234 4 TATGGGA 2875 0.0 37.565216 4 AATACGG 205 0.0 37.317074 2 AGGGATT 3880 0.0 37.055412 6 TCGTAAG 135 0.0 36.666664 1 TAAGGGA 3670 0.0 36.53951 4 CGGGATC 580 0.0 36.465515 6 GCGGGAT 1600 0.0 36.421875 5 TCACGAC 230 0.0 36.195652 25 CTCACGA 230 0.0 36.195652 24 GGCGATA 910 0.0 36.0989 8 TAGGGAC 2365 0.0 36.057083 5 >>END_MODULE