##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547993_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1996039 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.89857162109558 31.0 31.0 31.0 30.0 33.0 2 31.249159460311148 31.0 31.0 33.0 30.0 34.0 3 31.405190479745134 31.0 31.0 34.0 30.0 34.0 4 35.313123140379524 37.0 35.0 37.0 33.0 37.0 5 35.162066973641295 37.0 35.0 37.0 32.0 37.0 6 35.20219144014721 37.0 35.0 37.0 32.0 37.0 7 35.5186551966169 35.0 35.0 37.0 35.0 37.0 8 35.58288189759819 37.0 35.0 37.0 35.0 37.0 9 37.38945030633169 39.0 37.0 39.0 35.0 39.0 10 36.569770430337286 38.0 35.0 39.0 32.0 39.0 11 36.25014290802935 38.0 35.0 39.0 31.0 39.0 12 35.78405832751765 37.0 35.0 39.0 30.0 39.0 13 35.589822142753725 37.0 35.0 39.0 30.0 39.0 14 36.569466829054946 38.0 35.0 40.0 30.0 41.0 15 36.73067109410187 38.0 35.0 40.0 31.0 41.0 16 36.813128901789995 38.0 35.0 40.0 31.0 41.0 17 36.729066416036964 38.0 35.0 40.0 31.0 41.0 18 36.62605189577959 38.0 35.0 40.0 31.0 41.0 19 36.572603040321354 38.0 35.0 40.0 30.0 41.0 20 36.46383161852048 38.0 35.0 40.0 30.0 41.0 21 36.346316880581995 38.0 35.0 40.0 30.0 41.0 22 36.21662302189486 38.0 34.0 40.0 30.0 41.0 23 36.12737175977023 38.0 34.0 40.0 30.0 41.0 24 35.99864832300371 38.0 34.0 40.0 30.0 41.0 25 35.81703714205985 38.0 34.0 40.0 29.0 41.0 26 35.59826085562457 38.0 34.0 40.0 29.0 41.0 27 35.70487550593951 38.0 34.0 40.0 29.0 41.0 28 35.723086071965525 38.0 34.0 40.0 29.0 41.0 29 35.6896979467836 38.0 34.0 40.0 29.0 41.0 30 35.593562550631525 38.0 34.0 40.0 29.0 41.0 31 35.48804306929875 38.0 34.0 40.0 28.0 41.0 32 35.357011060405135 38.0 34.0 40.0 27.0 41.0 33 35.20103865706031 38.0 34.0 40.0 27.0 41.0 34 35.01279684414984 38.0 34.0 40.0 25.0 41.0 35 34.84642734936542 38.0 33.0 40.0 25.0 41.0 36 34.78120116891504 37.0 33.0 40.0 24.0 41.0 37 34.73252827224318 37.0 33.0 40.0 24.0 41.0 38 34.63666240990281 37.0 33.0 40.0 24.0 41.0 39 34.58912676555919 37.0 33.0 40.0 24.0 41.0 40 34.38824241410113 37.0 33.0 40.0 23.0 41.0 41 34.29224378882377 37.0 33.0 40.0 23.0 41.0 42 34.24677123042185 37.0 33.0 40.0 23.0 41.0 43 34.194712127368255 37.0 33.0 40.0 23.0 41.0 44 34.041845875756934 36.0 33.0 40.0 23.0 41.0 45 33.90889807263285 36.0 33.0 40.0 23.0 41.0 46 33.82634106848614 36.0 33.0 40.0 23.0 41.0 47 33.75627079430813 36.0 32.0 40.0 23.0 41.0 48 33.66015142990693 36.0 32.0 40.0 23.0 41.0 49 33.510430908414115 36.0 32.0 40.0 22.0 41.0 50 33.40834622970794 35.0 32.0 39.0 22.0 41.0 51 33.09362943309224 35.0 31.0 39.0 21.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 6.0 12 4.0 13 12.0 14 35.0 15 111.0 16 285.0 17 633.0 18 1397.0 19 2559.0 20 4228.0 21 6779.0 22 9799.0 23 13793.0 24 19801.0 25 27362.0 26 34951.0 27 41764.0 28 47191.0 29 54433.0 30 64369.0 31 77912.0 32 94622.0 33 118583.0 34 170355.0 35 188598.0 36 177331.0 37 219429.0 38 289430.0 39 330236.0 40 31.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.17913076848699 25.510222996644856 28.339376134434247 13.97127010043391 2 32.210843575701674 26.54822876707319 28.780098986041857 12.460828671183279 3 29.956779401604877 26.80353439987896 29.89585874825091 13.34382745026525 4 26.660952015466634 29.05093537751517 29.27042006694258 15.01769254007562 5 24.258143252711996 32.86624159147191 28.142987186122113 14.73262796969398 6 22.736329300179005 41.95178551120494 25.2287154709903 10.083169717625758 7 90.39587903843562 3.0274458565188356 5.335617189844487 1.2410579152010557 8 90.38265284395746 2.8358664334714905 5.323693575125536 1.4577871474455157 9 84.98285855136098 5.745829615553604 6.802472296382986 2.4688395367024394 10 39.2726795418326 36.65810136976281 13.244380495571479 10.824838592833105 11 33.9144175038664 25.907509823204855 23.54192478203081 16.636147890897924 12 31.495126097235577 22.556272698078544 27.370607488130243 18.57799371655564 13 25.870336200845774 27.258735926502435 27.92786112896592 18.94306674368587 14 21.587954944768114 28.802543437277528 29.58609526166573 20.02340635628863 15 21.353741084217294 25.685169478151483 34.28590323134969 18.67518620628154 16 25.44945264095541 24.979822538537576 31.434005046995573 18.13671977351144 17 25.287732353926952 24.209847603178094 27.514141757751226 22.988278285143725 18 25.912619943798692 24.98277839260656 29.38439579587373 19.72020586772102 19 27.30031828035424 26.218776286435286 26.590262013918565 19.890643419291905 20 29.24737442504881 26.907540383729977 25.795187368583477 18.049897822637735 21 27.937029286501918 25.544290467270432 28.043289735320805 18.47539051090685 22 26.71711324277732 23.277250594803007 28.018390422231228 21.987245740188442 23 24.564900786006685 26.49076496000329 27.82871476960119 21.11561948438883 24 24.125079720386225 25.665229987991218 30.454815762617866 19.75487452900469 25 24.06020122853311 26.53570396169614 28.24308543069549 21.161009379075256 26 22.533577750735333 28.978491903214316 26.641964410515023 21.84596593553533 27 21.732090405047195 27.859876485379292 28.827342551924083 21.580690557649422 28 20.542835084885617 28.176102771539036 29.892251604302324 21.38881053927303 29 22.044759646479854 26.928231362212863 29.850619151229008 21.176389840078276 30 23.758854411161305 26.603388009953715 29.087658106880674 20.550099472004305 31 25.6859209664741 26.738706007247355 27.15052160804473 20.42485141823381 32 26.4969772634703 26.510554152499022 26.8068409484985 20.18562763553217 33 25.851448794337184 26.742012555866896 26.218525790327746 21.188012859468177 34 22.372057860592903 27.86689037639044 28.596335041549793 21.164716721466863 35 22.65421667612707 28.420586972499034 28.340328019642904 20.584868331730995 36 25.49684650450217 28.679750245360935 25.824846107716333 19.998557142420566 37 23.165930124611794 29.652126035613534 26.18616169323345 20.995782146541224 38 23.443780407096256 29.430537178882776 25.62685398431594 21.49882842970503 39 23.894923896777566 27.9472996269111 25.88220971634322 22.275566759968115 40 24.83403380394872 27.27982769875739 26.104399763732072 21.78173873356182 41 21.591812584824243 26.550633529705582 27.44545572506349 24.412098160406686 42 22.790787153958412 26.932890589813123 26.264416677229253 24.011905578999208 43 22.63562986494753 26.475184102114234 27.1307825147705 23.758403518167732 44 22.633976590637758 27.44380245075372 27.29230240491293 22.629918553695592 45 22.08408753536379 28.190230752004346 26.199588284597645 23.526093428034223 46 23.020742580681038 27.90441469330008 26.59832798858138 22.476514737437494 47 22.138294893035656 27.76604064349444 28.313074043142443 21.78259042032746 48 23.283412799048516 26.85889403964552 28.207665281089195 21.65002788021677 49 23.05541124196471 26.717914830321455 28.22008988802323 22.00658403969061 50 22.002876697299 28.203907839476084 27.817592742426378 21.97562272079854 51 21.93819860233192 28.21843661371346 27.03163615540578 22.811728628548842 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 868.0 1 1516.0 2 2164.0 3 9076.0 4 15988.0 5 12361.5 6 8735.0 7 8185.5 8 7636.0 9 8130.0 10 8624.0 11 8928.0 12 9232.0 13 9099.0 14 8966.0 15 8781.5 16 8597.0 17 8497.5 18 8398.0 19 8611.5 20 8825.0 21 9473.0 22 10121.0 23 11076.5 24 12032.0 25 13615.0 26 17540.5 27 19883.0 28 23707.0 29 27531.0 30 31249.0 31 34967.0 32 40520.0 33 46073.0 34 53806.0 35 61539.0 36 64365.5 37 67192.0 38 74168.0 39 81144.0 40 92246.0 41 103348.0 42 112036.0 43 120724.0 44 126627.5 45 132531.0 46 131797.5 47 131064.0 48 133860.0 49 136656.0 50 135223.5 51 133791.0 52 131104.0 53 128417.0 54 122574.0 55 116731.0 56 111570.0 57 106409.0 58 101320.0 59 96231.0 60 91840.5 61 87450.0 62 78611.5 63 69773.0 64 62765.0 65 55757.0 66 46650.5 67 37544.0 68 31645.5 69 25747.0 70 21882.5 71 18018.0 72 15054.0 73 12090.0 74 10448.0 75 7257.0 76 5708.0 77 4399.5 78 3091.0 79 2260.5 80 1430.0 81 957.0 82 484.0 83 366.5 84 249.0 85 178.5 86 108.0 87 96.0 88 84.0 89 69.0 90 54.0 91 37.0 92 20.0 93 11.5 94 3.0 95 5.0 96 7.0 97 4.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1996039.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 22.113884577777952 #Duplication Level Percentage of deduplicated Percentage of total 1 75.28992022523249 16.649526057309007 2 5.891951889782672 2.6058788805694935 3 2.245853440687803 1.4899363129792667 4 1.3642020937494432 1.206712305677528 5 1.0371398990696123 1.146759600951684 6 0.8003642457592263 1.06194975305399 7 0.6766712968830002 1.047468166945619 8 0.6066043259026772 1.0731502437914082 9 0.5620921952609309 1.1187037735263046 >10 10.508404936734745 57.030854704139614 >50 0.966010049285705 13.084939996234956 >100 0.048466436706419376 1.689772509389913 >500 0.0016232754616861708 0.22112506537762994 >1k 4.6379298905319165E-4 0.14897224372031886 >5k 2.3189649452659582E-4 0.4242503863332867 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8273 0.41447085953731366 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.01477927034491811 0.0 2 0.0 0.0 0.0 0.04899703863501665 0.0 3 0.0 0.0 0.0 0.07920686920445943 0.0 4 0.0 0.0 0.0 0.13211164711711545 0.0 5 0.0 0.0 0.0 0.2359673333036078 0.0 6 0.0 0.0 0.0 0.4122163945694448 0.0 7 0.0 0.0 0.0 0.5014932072970518 0.0 8 0.0 0.0 0.0 0.6622115098953477 0.0 9 0.0 0.0 0.0 0.752590505496135 0.0 10 0.0 0.0 0.0 0.9008842011603981 0.0 11 0.0 0.0 0.0 1.075029095122891 0.0 12 0.0 0.0 0.0 1.2049864757151538 0.0 13 0.0 0.0 0.0 1.2827905667173838 0.0 14 0.0 0.0 0.0 1.3311363154727938 0.0 15 0.0 0.0 0.0 1.384341688714499 0.0 16 0.0 0.0 0.0 1.4725163185689258 0.0 17 0.0 0.0 0.0 1.5773238899640738 0.0 18 0.0 0.0 0.0 1.6939548776351565 0.0 19 0.0 0.0 0.0 1.7658973597209273 0.0 20 0.0 0.0 0.0 1.850765440955813 0.0 21 0.0 0.0 0.0 1.9486092205613217 0.0 22 0.0 0.0 0.0 2.0629356440430273 0.0 23 0.0 0.0 0.0 2.1796668301571263 0.0 24 0.0 0.0 0.0 2.277510609762635 0.0 25 0.0 0.0 0.0 2.362829583991094 0.0 26 0.0 0.0 0.0 2.449150542649718 0.0 27 0.0 0.0 0.0 2.5424352930979803 0.0 28 0.0 0.0 0.0 2.6331649832493254 0.0 29 0.0 0.0 0.0 2.7421307900296537 0.0 30 0.0 0.0 0.0 2.865224577275294 0.0 31 0.0 0.0 0.0 2.976144253694442 0.0 32 0.0 0.0 0.0 3.0903203795116228 0.0 33 0.0 0.0 0.0 3.2059493827525416 0.0 34 0.0 0.0 0.0 3.3303958489789025 0.0 35 5.009922150819699E-5 0.0 0.0 3.46746731902533 0.0 36 5.009922150819699E-5 0.0 0.0 3.5948696393206747 0.0 37 1.0019844301639397E-4 0.0 0.0 3.7273319809883474 0.0 38 1.0019844301639397E-4 0.0 0.0 3.8761266688676925 0.0 39 1.0019844301639397E-4 0.0 0.0 4.101773562540612 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTATACG 50 1.0822987E-9 40.500004 1 CGGTCTA 90 0.0 40.0 31 GGGCGAT 3400 0.0 38.977943 7 CGTTTTT 5760 0.0 38.632812 1 CACGACC 1025 0.0 38.414635 27 ACGGGAT 650 0.0 38.07692 5 AGGGCGA 1810 0.0 38.038677 6 CGTTAGG 290 0.0 38.01724 2 TACGGGA 790 0.0 37.87975 4 TAATACG 60 1.5643309E-10 37.500004 1 TAAGGGA 2645 0.0 37.344044 4 GTAGGGA 2865 0.0 37.225132 4 GGCGATA 865 0.0 37.196533 8 ACACGAC 1055 0.0 37.109005 26 TCGTTAG 85 0.0 37.058823 1 TTACGCG 85 0.0 37.058823 1 ACGACCA 1075 0.0 36.83721 28 GCGATCG 110 0.0 36.81818 9 TAGGGAC 2065 0.0 36.719128 5 TAGGGAG 2945 0.0 36.672325 5 >>END_MODULE