SRR1547991_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547991_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	928016
Sequences flagged as poor quality	0
Sequence length	51
%GC	43

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6082	0.655376631437389	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	1493	0.1608808468819503	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CACGACG	125	0.0	45.000004	26
TCGTTAG	45	3.8380676E-10	45.0	1
CGCATCG	75	0.0	45.0	21
TGAACGA	20	7.032585E-4	45.0	28
GCCGGAT	25	3.8902235E-5	45.0	19
CGACCCA	35	1.2115925E-7	45.0	20
CTTATCG	35	1.2115925E-7	45.0	24
CTACGTG	20	7.032585E-4	45.0	1
TGCGATC	25	3.8902235E-5	45.0	22
CTAAACG	20	7.032585E-4	45.0	1
ACGTCCC	20	7.032585E-4	45.0	39
GTCCACC	20	7.032585E-4	45.0	9
CGTCCCG	25	3.8902235E-5	45.0	40
TATCGTG	40	6.8121153E-9	45.0	1
AAGTGCG	35	1.2115925E-7	45.0	1
TCGGTAC	20	7.032585E-4	45.0	36
ATACCGG	85	0.0	45.0	2
TGGTACG	20	7.032585E-4	45.0	1
TACTCGC	30	2.1650485E-6	44.999996	45
TCCAACG	30	2.1650485E-6	44.999996	1