##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547990_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2001663 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.876663054670043 31.0 31.0 31.0 30.0 33.0 2 31.207925609855405 31.0 31.0 33.0 30.0 34.0 3 31.311516973636422 31.0 31.0 34.0 30.0 34.0 4 35.231704337843084 37.0 35.0 37.0 33.0 37.0 5 35.09911958206751 37.0 35.0 37.0 32.0 37.0 6 35.150503356459105 37.0 35.0 37.0 32.0 37.0 7 35.550089100912594 36.0 35.0 37.0 35.0 37.0 8 35.64652241661059 37.0 35.0 37.0 35.0 37.0 9 37.47318055037236 39.0 37.0 39.0 35.0 39.0 10 36.59853232037561 39.0 35.0 39.0 32.0 39.0 11 36.189971039081 38.0 35.0 39.0 31.0 39.0 12 35.94300938769413 37.0 35.0 39.0 31.0 39.0 13 35.82672208058999 38.0 35.0 39.0 30.0 39.0 14 36.87352116714951 39.0 35.0 40.0 31.0 41.0 15 37.00871974952827 39.0 35.0 41.0 31.0 41.0 16 37.072509208593054 39.0 35.0 41.0 31.0 41.0 17 36.9894667583904 39.0 35.0 41.0 31.0 41.0 18 36.883940503471365 38.0 35.0 40.0 31.0 41.0 19 36.827174204648834 38.0 35.0 40.0 31.0 41.0 20 36.69137012574045 38.0 35.0 40.0 31.0 41.0 21 36.58657526266909 38.0 35.0 40.0 30.0 41.0 22 36.483227196586036 38.0 35.0 40.0 30.0 41.0 23 36.38543151369636 38.0 35.0 40.0 30.0 41.0 24 36.295122105968886 38.0 35.0 40.0 30.0 41.0 25 36.12379606357314 38.0 34.0 40.0 30.0 41.0 26 35.92291809360517 38.0 34.0 40.0 29.0 41.0 27 35.99071522029433 38.0 34.0 40.0 30.0 41.0 28 35.989685576443186 38.0 34.0 40.0 30.0 41.0 29 35.95421806767673 38.0 34.0 40.0 30.0 41.0 30 35.86198625842612 38.0 34.0 40.0 29.0 41.0 31 35.77407285841822 38.0 34.0 40.0 29.0 41.0 32 35.625502894343356 38.0 34.0 40.0 28.0 41.0 33 35.480402045699 38.0 34.0 40.0 27.0 41.0 34 35.301025697132836 38.0 34.0 40.0 26.0 41.0 35 35.146922334079214 38.0 34.0 40.0 25.0 41.0 36 35.06465673792242 38.0 34.0 40.0 25.0 41.0 37 35.01832626171338 38.0 34.0 40.0 25.0 41.0 38 34.92917039481671 38.0 34.0 40.0 24.0 41.0 39 34.89978882559152 38.0 34.0 40.0 24.0 41.0 40 34.73699718683914 38.0 33.0 40.0 24.0 41.0 41 34.65975791129676 38.0 33.0 40.0 24.0 41.0 42 34.62150571799549 38.0 33.0 40.0 24.0 41.0 43 34.5873686030066 38.0 33.0 40.0 23.0 41.0 44 34.447433958663375 37.0 33.0 40.0 23.0 41.0 45 34.32613032263673 37.0 33.0 40.0 23.0 41.0 46 34.25761629205316 37.0 33.0 40.0 23.0 41.0 47 34.213928118769246 37.0 33.0 40.0 23.0 41.0 48 34.12514743990372 37.0 33.0 40.0 23.0 41.0 49 33.98841263489408 37.0 33.0 40.0 23.0 41.0 50 33.88925208688975 37.0 33.0 40.0 23.0 41.0 51 33.55957371445643 36.0 32.0 40.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 1.0 10 1.0 11 2.0 12 3.0 13 6.0 14 20.0 15 70.0 16 197.0 17 539.0 18 1132.0 19 2088.0 20 3609.0 21 5699.0 22 8941.0 23 12941.0 24 18764.0 25 26790.0 26 34390.0 27 39462.0 28 44798.0 29 51516.0 30 60796.0 31 72775.0 32 88913.0 33 110047.0 34 153356.0 35 180357.0 36 176895.0 37 219822.0 38 304464.0 39 383222.0 40 46.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.72259116544593 25.410671027041015 28.028144597766957 13.838593209746097 2 32.14432199626011 26.33829970379629 28.633041625888072 12.884336674055522 3 28.319702167647602 26.402746116604042 31.952681345461247 13.324870370287107 4 24.842443508222914 28.956922319091678 31.268300408210575 14.932333764474839 5 22.640224653200864 32.87601359469601 30.278323573948263 14.205438178154864 6 21.32781592106164 42.19426546826314 26.67926619016288 9.798652420512344 7 90.38969097195681 2.6270156364982515 5.990718717386493 0.9925746741584373 8 90.89691921167548 2.1470147572293636 5.696563307609723 1.259502723485422 9 86.39691096852967 5.193481620032943 6.753984062252237 1.6556233491851524 10 36.83532143023076 41.13264820301919 12.227133138795091 9.804897227954955 11 25.236565795541004 27.162414452382844 29.945700150325006 17.655319601751142 12 26.388208204877646 25.3314868686687 30.336125511637075 17.94417941481658 13 22.951166105383376 28.414023739260802 30.85739207848674 17.777418076869083 14 18.803714711217623 31.64398802395808 30.841305454514572 18.710991810309725 15 18.217402230045717 28.915456797672732 35.50098093435309 17.366160037928463 16 22.19114806038779 27.669892484399224 33.378146071541515 16.760813383671476 17 21.56456906082592 26.642346888562162 30.062952654867477 21.73013139574444 18 22.20963269041792 27.29300586562273 31.695495195744737 18.801866248214612 19 23.868453381013687 29.00213472497618 28.524781644062962 18.604630249947167 20 25.543410654041164 28.696588786424087 28.70003592013241 17.059964639402338 21 24.168653764394907 27.64206562243495 30.56088862111155 17.628391992058603 22 23.205054996770187 24.769204406535966 30.963154137334808 21.062586459359043 23 20.098438148679374 29.553526242929006 30.515576298307955 19.832459310083667 24 19.836156236089693 28.740202521603287 33.16232552632486 18.26131571598216 25 20.951328969961477 29.751861327306344 30.315592584765767 18.981217117966413 26 20.453642796015114 31.819042466189362 28.219085830132247 19.508228907663277 27 19.457770863526978 30.655459985022453 30.94931564404198 18.937453507408588 28 18.580850023205706 30.087232466204348 32.61677914813833 18.715138362451622 29 19.322383438171162 28.51124290152738 32.45416436233272 19.712209297968737 30 20.834725925393034 28.30906101576539 32.00733590019899 18.848877158642587 31 22.89985876743488 28.754240848734273 29.12178523557662 19.224115148254224 32 22.05960743641662 28.956822402172595 29.60423407936301 19.379336082047775 33 21.706850753598385 28.987546854790242 29.103200688627407 20.20240170298397 34 19.76776310497821 29.756157754826862 30.418057385284136 20.05802175491079 35 19.98458281938568 29.62226908325727 30.314793249413114 20.078354847943935 36 22.57987483407547 29.847681652705777 28.017853155101534 19.554590358117224 37 20.447497905491584 30.936576236859054 28.70717997984676 19.90874587780261 38 20.346931526435768 31.698742495614894 28.240967635411156 19.71335834253818 39 20.411228063864897 29.992661102293443 28.50669668170916 21.089414152132502 40 21.950448202319773 28.966314509485365 28.981901548862123 20.101335739332747 41 19.364748211861837 29.521802621120543 29.18962882363315 21.923820343384477 42 20.90436801799304 30.10177037793075 27.683481185394342 21.310380418681866 43 20.496357278922574 29.62566625850605 28.363815487422205 21.514160975149164 44 19.900602648897443 30.290963064212107 29.26316767607734 20.54526661081311 45 20.244716518215103 30.84605150817096 28.01760336280383 20.891628610810113 46 20.91331058225086 30.758274494757607 28.09618801966165 20.23222690332988 47 20.13800524863576 30.35041363106577 28.91715538529713 20.594425735001344 48 20.673460017995037 29.64804764838037 29.71174468429501 19.966747649329584 49 20.896424622926038 29.03390830524419 29.312226883346497 20.757440188483276 50 19.57612245417935 30.65191293439505 29.398804893730862 20.373159717694737 51 19.608795286719094 30.751430185800505 28.81933672151606 20.82043780596434 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 943.0 1 1434.5 2 1926.0 3 11416.0 4 20906.0 5 16166.5 6 11427.0 7 10774.0 8 10121.0 9 10778.5 10 11436.0 11 12154.0 12 12872.0 13 13037.0 14 13202.0 15 13055.5 16 12909.0 17 12646.0 18 12383.0 19 12135.0 20 11887.0 21 12553.5 22 13220.0 23 14605.0 24 15990.0 25 18998.0 26 26125.5 27 30245.0 28 35309.0 29 40373.0 30 45664.0 31 50955.0 32 57654.0 33 64353.0 34 73719.5 35 83086.0 36 88137.0 37 93188.0 38 102124.0 39 111060.0 40 119872.5 41 128685.0 42 135719.5 43 142754.0 44 146059.5 45 149365.0 46 150496.5 47 151628.0 48 151765.5 49 151903.0 50 143760.0 51 135617.0 52 128096.5 53 120576.0 54 109245.0 55 97914.0 56 87433.5 57 76953.0 58 69819.5 59 62686.0 60 55148.5 61 47611.0 62 40160.0 63 32709.0 64 26928.5 65 21148.0 66 17421.0 67 13694.0 68 11148.5 69 8603.0 70 6909.0 71 5215.0 72 4728.5 73 4242.0 74 3693.5 75 2191.0 76 1237.0 77 996.0 78 755.0 79 557.0 80 359.0 81 277.5 82 196.0 83 129.0 84 62.0 85 55.5 86 49.0 87 38.0 88 27.0 89 18.5 90 10.0 91 6.5 92 3.0 93 7.0 94 11.0 95 8.0 96 5.0 97 9.0 98 13.0 99 6.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2001663.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 22.926724475722782 #Duplication Level Percentage of deduplicated Percentage of total 1 74.89197732860204 17.17027729654936 2 6.923019672932618 3.1744432916266914 3 2.8953999964645583 1.9914611389785495 4 1.7497484783726793 1.604640050618624 5 1.1880246430102082 1.361875683033198 6 0.9128679316999807 1.255744293168503 7 0.7476381824004955 1.1998626230798433 8 0.6452055208851605 1.1833959366039422 9 0.5577106979101051 1.150783155733324 >10 7.9171944763350055 42.951730554106895 >50 1.4507729890245427 22.0614291664278 >100 0.11731177325358277 3.7189376400096723 >500 0.0022345065064781895 0.33740022027716776 >1k 6.703519519434568E-4 0.20968404214917213 >5k 0.0 0.0 >10k+ 2.2345065064781892E-4 0.628334907637331 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 12265 0.6127405062690373 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.995845954089175E-5 0.0 0.0 0.019084131544620648 0.0 2 4.995845954089175E-5 0.0 0.0 0.05725239463386195 0.0 3 4.995845954089175E-5 0.0 0.0 0.09292273474605865 0.0 4 4.995845954089175E-5 0.0 0.0 0.1627147027246844 0.0 5 4.995845954089175E-5 0.0 0.0 0.29750262656601034 0.0 6 4.995845954089175E-5 0.0 0.0 0.5506421410597089 0.0 7 4.995845954089175E-5 0.0 0.0 0.6761877498859699 0.0 8 4.995845954089175E-5 0.0 0.0 0.9481116451670436 0.0 9 4.995845954089175E-5 0.0 0.0 1.0865465365548546 0.0 10 4.995845954089175E-5 0.0 0.0 1.2801355672758101 0.0 11 4.995845954089175E-5 0.0 0.0 1.4903607650238826 0.0 12 4.995845954089175E-5 0.0 0.0 1.6488289986875913 0.0 13 4.995845954089175E-5 0.0 0.0 1.7410023565405366 0.0 14 4.995845954089175E-5 0.0 0.0 1.7959566620355174 0.0 15 4.995845954089175E-5 0.0 0.0 1.8485129614725355 0.0 16 4.995845954089175E-5 0.0 0.0 1.9389877317010906 0.0 17 4.995845954089175E-5 0.0 0.0 2.0533926040497326 0.0 18 4.995845954089175E-5 0.0 0.0 2.183434474234674 0.0 19 4.995845954089175E-5 0.0 0.0 2.2700124846190395 0.0 20 4.995845954089175E-5 0.0 0.0 2.360587171766676 0.0 21 4.995845954089175E-5 0.0 0.0 2.473043664193223 0.0 22 4.995845954089175E-5 0.0 0.0 2.6105293448497573 0.0 23 4.995845954089175E-5 0.0 0.0 2.755109126761098 0.0 24 4.995845954089175E-5 0.0 0.0 2.8693641237311174 0.0 25 4.995845954089175E-5 0.0 0.0 2.9704300873823417 0.0 26 4.995845954089175E-5 0.0 0.0 3.0739440155510693 0.0 27 9.99169190817835E-5 0.0 0.0 3.1813547035639864 0.0 28 1.4987537862267526E-4 0.0 0.0 3.3024540094911083 0.0 29 1.4987537862267526E-4 0.0 0.0 3.433045422730999 0.0 30 1.4987537862267526E-4 0.0 0.0 3.590114819527563 0.0 31 1.4987537862267526E-4 0.0 0.0 3.730747883135173 0.0 32 1.4987537862267526E-4 0.0 0.0 3.8726798666908464 0.0 33 1.4987537862267526E-4 0.0 0.0 4.01126463345728 0.0 34 1.4987537862267526E-4 0.0 0.0 4.1520475724435135 0.0 35 1.4987537862267526E-4 0.0 0.0 4.319708162662746 0.0 36 1.4987537862267526E-4 0.0 0.0 4.473830010346397 0.0 37 1.4987537862267526E-4 0.0 0.0 4.6369443807474084 0.0 38 1.4987537862267526E-4 0.0 0.0 4.819542550369368 0.0 39 1.4987537862267526E-4 0.0 0.0 5.063289874469379 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 7175 0.0 41.6446 1 TAGTACG 60 3.6379788E-12 41.250004 1 TACGGGA 1085 0.0 41.059906 4 CGCGTCA 50 1.0822987E-9 40.5 39 AGGGCGA 1785 0.0 39.95798 6 CGTAAGG 430 0.0 39.244186 2 TAACGCG 70 0.0 38.571426 1 CGGTCTA 70 0.0 38.571426 31 CGCGTAA 70 0.0 38.571426 31 ACGGGAT 1175 0.0 38.48936 5 GGGCGAT 3305 0.0 38.39637 7 AGGGATC 2865 0.0 38.324608 6 ACGGGAC 875 0.0 38.057144 5 AGGGATT 4680 0.0 38.028843 6 TAGGGAC 2845 0.0 37.961334 5 AAGGGAT 4410 0.0 37.90816 5 TAGGGAT 3810 0.0 37.854332 5 TAAGGGA 3775 0.0 37.788082 4 TTAGGGA 2820 0.0 37.659573 4 GTAGGGA 3340 0.0 37.589817 4 >>END_MODULE