##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547989_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1969702 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.865999019140965 31.0 31.0 31.0 30.0 33.0 2 31.217569459745686 31.0 31.0 33.0 30.0 34.0 3 31.41322748314212 31.0 31.0 34.0 30.0 34.0 4 35.31556499409555 37.0 35.0 37.0 33.0 37.0 5 35.13878495325689 37.0 35.0 37.0 32.0 37.0 6 35.17581288946247 37.0 35.0 37.0 32.0 37.0 7 35.46539730375458 35.0 35.0 37.0 35.0 37.0 8 35.52715639218521 37.0 35.0 37.0 35.0 37.0 9 37.363773809439195 39.0 37.0 39.0 35.0 39.0 10 36.528716018971394 38.0 35.0 39.0 32.0 39.0 11 36.1289717937028 38.0 35.0 39.0 31.0 39.0 12 35.63936778253766 37.0 35.0 39.0 30.0 39.0 13 35.449866528033176 37.0 35.0 39.0 30.0 39.0 14 36.41839323918034 38.0 35.0 40.0 30.0 41.0 15 36.62512451122048 38.0 35.0 40.0 30.0 41.0 16 36.7541196587098 38.0 35.0 40.0 31.0 41.0 17 36.69299772249813 38.0 35.0 40.0 31.0 41.0 18 36.62922919304545 38.0 35.0 40.0 31.0 41.0 19 36.568045318530416 38.0 35.0 40.0 30.0 41.0 20 36.420292511252974 38.0 35.0 40.0 30.0 41.0 21 36.2890274772529 38.0 34.0 40.0 30.0 41.0 22 36.19938549080013 38.0 34.0 40.0 30.0 41.0 23 36.09720505944554 38.0 34.0 40.0 30.0 41.0 24 35.96377472328302 38.0 34.0 40.0 29.0 41.0 25 35.771468983633056 38.0 34.0 40.0 29.0 41.0 26 35.54111281808111 38.0 34.0 40.0 28.0 41.0 27 35.617488838413124 38.0 34.0 40.0 29.0 41.0 28 35.62061976887875 38.0 34.0 40.0 29.0 41.0 29 35.582615035167755 38.0 34.0 40.0 28.0 41.0 30 35.508231702054424 38.0 34.0 40.0 28.0 41.0 31 35.40089109926273 38.0 34.0 40.0 27.0 41.0 32 35.274344037829074 38.0 34.0 40.0 27.0 41.0 33 35.1406882868576 38.0 34.0 40.0 26.0 41.0 34 34.97347314466858 37.0 33.0 40.0 25.0 41.0 35 34.842746770831326 37.0 33.0 40.0 25.0 41.0 36 34.753875967024456 37.0 33.0 40.0 24.0 41.0 37 34.70608142754589 37.0 33.0 40.0 24.0 41.0 38 34.624402574602655 37.0 33.0 40.0 24.0 41.0 39 34.561464627644185 37.0 33.0 40.0 24.0 41.0 40 34.36126632353523 37.0 33.0 40.0 23.0 41.0 41 34.25238741697983 37.0 33.0 40.0 23.0 41.0 42 34.228629508423104 37.0 33.0 40.0 23.0 41.0 43 34.18083243048949 36.0 33.0 40.0 23.0 41.0 44 34.02355077062418 36.0 33.0 40.0 23.0 41.0 45 33.893269641803684 36.0 33.0 40.0 23.0 41.0 46 33.83475825277123 36.0 32.0 40.0 23.0 41.0 47 33.744390268172545 36.0 32.0 40.0 23.0 41.0 48 33.64537021336223 35.0 32.0 40.0 23.0 41.0 49 33.48722700185104 35.0 32.0 39.0 22.0 41.0 50 33.37313055477428 35.0 32.0 39.0 22.0 41.0 51 33.04398990304117 35.0 31.0 39.0 21.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 1.0 10 0.0 11 4.0 12 4.0 13 21.0 14 39.0 15 115.0 16 331.0 17 748.0 18 1536.0 19 2825.0 20 4645.0 21 7082.0 22 10326.0 23 14989.0 24 20369.0 25 27238.0 26 33862.0 27 40183.0 28 46177.0 29 54152.0 30 64457.0 31 77906.0 32 94426.0 33 117816.0 34 169420.0 35 187501.0 36 175602.0 37 214401.0 38 279916.0 39 323571.0 40 38.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.85466430962653 24.67378314079998 28.886755458439907 12.58479709113358 2 31.244421745015238 26.600521297130225 28.95808604550333 13.196970912351208 3 29.708148745343205 26.217265352830022 30.250971974440805 13.823613927385969 4 26.934683520654396 28.811667957894137 29.148114790968382 15.105533730483089 5 23.385111047254863 33.059975569908545 28.666925250621667 14.887988132214925 6 22.06734825877214 43.266037197505 24.51619585094598 10.150418692776878 7 90.95416464013338 3.091025952149107 4.6517696585574875 1.3030397491600252 8 91.14531030582292 2.7882898022137357 4.497685436680269 1.5687144552830834 9 86.81165983483797 5.020810254546119 5.690251621818935 2.4772782887969855 10 44.23669164167981 32.368500412752795 12.283939397939383 11.110868547628016 11 34.07957142755605 24.75460754977149 23.599255115748473 17.56656590692399 12 32.61772593011531 22.17492798403007 26.99169722120402 18.21564886465059 13 25.977584426476696 27.377136236852074 27.092169272306165 19.553110064365068 14 20.8701113163311 29.289912890376314 29.00926129942499 20.8307144938676 15 19.300635324531328 26.9032574470656 34.032254625318956 19.76385260308412 16 23.770854677509593 23.897269739280357 32.37804500376199 19.95383057944806 17 23.69972716685062 24.47547903185355 27.06810471837872 24.75668908291711 18 24.494568213871943 25.648854496771595 29.248739149373865 20.607838139982597 19 27.024697136927312 27.744704528908432 24.205590490338132 21.02500784382612 20 28.57158087873191 26.308243582024083 26.013224335457853 19.106951203786156 21 26.461617036485723 26.215996125302205 27.694747733413482 19.627639104798593 22 26.959712687502986 23.083339510240634 26.790651580797505 23.166296221458882 23 24.031503242622488 27.32687482675044 26.23325761968054 22.40836431094653 24 22.861529307479 26.527718406134532 30.604477225488928 20.006275060897536 25 23.924177362870118 27.50766359581297 27.030840198161954 21.537318843154953 26 23.226812989985287 28.900412346639236 25.14405732440745 22.72871733896803 27 21.743035240863847 28.979916758981815 27.90538873393031 21.37165926622403 28 21.023383232590515 27.406226931789686 29.910463613277543 21.659926222342264 29 21.861022631849895 26.185179280926757 29.263309881393223 22.69048820583012 30 22.83299707265363 27.604175657028325 28.449785805162403 21.113041465155643 31 26.15167167419234 27.506851290195165 25.597933088355497 20.743543947256995 32 27.097093875114105 26.656265770152032 25.199243337317018 21.04739701741685 33 26.085671842745757 27.084300061633687 24.990074640732455 21.8399534548881 34 22.44872574633117 26.984081856037108 27.3927731199948 23.174419277636922 35 23.28509591806273 26.985198776261587 27.744146068796194 21.98555923687949 36 27.276867262154376 27.0958754166874 24.636112467774314 20.991144853383915 37 22.814466350747473 29.0673919201991 26.394449515713546 21.723692213339884 38 23.39475717646629 28.32007075181931 26.599150531400177 21.686021540314222 39 22.403490477239703 28.2710785692455 26.171979314637444 23.153451638877353 40 25.438061188951426 25.75095115910935 26.965398826827613 21.845588825111616 41 21.664038519532397 25.518073292305132 28.76805730003828 24.049830888124195 42 22.889706158596578 26.430850961211394 26.104202564651914 24.575240315540118 43 22.695108194031384 25.927729169183966 27.07830930770238 24.298853329082267 44 21.83645038691132 27.1428368352167 27.786487499124235 23.23422527874775 45 21.71237070379174 28.608540784341997 26.03495351073411 23.644135001132152 46 23.22650837537861 28.06708832097444 26.165176255088333 22.541227048558614 47 22.534576296312846 27.201982838013063 27.909754876626007 22.35368598904809 48 22.762224945702446 26.796337720122132 28.377287528773387 22.064149805402035 49 22.62047761539563 26.66195190947666 27.885436477193 22.832133997934715 50 21.628957070663482 27.715969217678616 28.60843924613977 22.04663446551813 51 21.08374769381358 28.38825365461374 27.47618675312306 23.051811898449614 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 950.0 1 1680.5 2 2411.0 3 7181.5 4 11952.0 5 9282.0 6 6612.0 7 6488.5 8 6365.0 9 6711.5 10 7058.0 11 7384.0 12 7710.0 13 7761.0 14 7812.0 15 7825.0 16 7838.0 17 7642.5 18 7447.0 19 7364.5 20 7282.0 21 7992.5 22 8703.0 23 9709.0 24 10715.0 25 12189.5 26 17141.5 27 20619.0 28 23025.5 29 25432.0 30 32144.5 31 38857.0 32 42305.0 33 45753.0 34 54162.5 35 62572.0 36 66257.5 37 69943.0 38 74457.5 39 78972.0 40 89318.0 41 99664.0 42 110284.5 43 120905.0 44 124444.0 45 127983.0 46 128088.5 47 128194.0 48 129533.0 49 130872.0 50 129427.5 51 127983.0 52 123266.5 53 118550.0 54 113038.5 55 107527.0 56 106116.0 57 104705.0 58 103058.0 59 101411.0 60 96102.5 61 90794.0 62 81134.5 63 71475.0 64 65750.0 65 60025.0 66 52271.0 67 44517.0 68 38388.5 69 32260.0 70 26949.0 71 21638.0 72 17774.5 73 13911.0 74 11182.5 75 6540.5 76 4627.0 77 3791.0 78 2955.0 79 2179.0 80 1403.0 81 977.5 82 552.0 83 434.0 84 316.0 85 232.0 86 148.0 87 126.0 88 104.0 89 70.5 90 37.0 91 27.5 92 18.0 93 12.0 94 6.0 95 3.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1969702.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.17658047479226 #Duplication Level Percentage of deduplicated Percentage of total 1 77.68705359774818 15.674590887644657 2 6.111584714500476 2.466217616412583 3 2.1973103328326262 1.3300262627547015 4 1.3272767606607216 1.0711962549517056 5 0.8935143249512634 0.9014031841379425 6 0.6936519002982231 0.8397314032715807 7 0.5906980110515991 0.8342786169397622 8 0.4895574112472459 0.7902075604048822 9 0.41502635581869035 0.7536431400602016 >10 7.0578251230177464 36.11159047978225 >50 2.288092218494025 31.672632069398777 >100 0.2440331280102251 6.305417569956062 >500 0.0025741890405189486 0.3710474461895156 >1k 0.0015445134243113694 0.5497672477486034 >5k 2.5741890405189485E-4 0.3282502603468279 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6320 0.3208607190326252 No Hit AGGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT 2405 0.12209968817618097 No Hit GAGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT 2026 0.102858198854446 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 2014 0.10224896964109292 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.0153820222551432E-4 0.0 0.0 0.012641506177076533 0.0 2 1.0153820222551432E-4 0.0 0.0 0.04157989381134811 0.0 3 1.0153820222551432E-4 0.0 0.0 0.06797982638998183 0.0 4 1.0153820222551432E-4 0.0 0.0 0.12509506514183363 0.0 5 1.0153820222551432E-4 0.0 0.0 0.2198302078182385 0.0 6 1.0153820222551432E-4 0.0 0.0 0.3910743858715684 0.0 7 1.0153820222551432E-4 0.0 0.0 0.47372648248313703 0.0 8 1.0153820222551432E-4 0.0 0.0 0.6623844622181426 0.0 9 1.0153820222551432E-4 0.0 0.0 0.7514842346710314 0.0 10 1.0153820222551432E-4 0.0 0.0 0.8934854104834132 0.0 11 1.0153820222551432E-4 0.0 0.0 1.0804680098816979 0.0 12 1.0153820222551432E-4 0.0 0.0 1.217392275582804 0.0 13 1.0153820222551432E-4 0.0 0.0 1.2902967047807232 0.0 14 1.0153820222551432E-4 0.0 0.0 1.3350242828610623 0.0 15 1.0153820222551432E-4 0.0 0.0 1.3813764721770094 0.0 16 1.0153820222551432E-4 0.0 0.0 1.4637239541819016 0.0 17 1.0153820222551432E-4 0.0 0.0 1.554803721578188 0.0 18 1.0153820222551432E-4 0.0 0.0 1.6603019136904973 0.0 19 1.0153820222551432E-4 0.0 0.0 1.7293986603049598 0.0 20 1.0153820222551432E-4 0.0 0.0 1.8007292473683836 0.0 21 1.0153820222551432E-4 0.0 0.0 1.893941317011406 0.0 22 1.0153820222551432E-4 0.0 0.0 1.9962918248547241 0.0 23 1.0153820222551432E-4 0.0 0.0 2.1051915467415885 0.0 24 1.0153820222551432E-4 0.0 0.0 2.191549787734388 0.0 25 1.0153820222551432E-4 0.0 0.0 2.2744049607504078 0.0 26 1.0153820222551432E-4 0.0 0.0 2.3508632270262204 0.0 27 1.0153820222551432E-4 0.0 0.0 2.4374245444234712 0.0 28 1.0153820222551432E-4 0.0 0.0 2.5193151045183484 0.0 29 1.0153820222551432E-4 0.0 0.0 2.616842547755955 0.0 30 1.0153820222551432E-4 0.0 0.0 2.7428006876167053 0.0 31 1.0153820222551432E-4 0.0 0.0 2.8498219527623974 0.0 32 1.0153820222551432E-4 0.0 0.0 2.9518678459990393 0.0 33 1.0153820222551432E-4 0.0 0.0 3.049141443731082 0.0 34 1.0153820222551432E-4 0.0 0.0 3.163168844830335 0.0 35 1.0153820222551432E-4 0.0 0.0 3.3133438459218705 0.0 36 1.0153820222551432E-4 0.0 0.0 3.4269650942122207 0.0 37 1.0153820222551432E-4 0.0 0.0 3.550943239129574 0.0 38 1.0153820222551432E-4 0.0 0.0 3.7068043795457384 0.0 39 1.0153820222551432E-4 0.0 0.0 3.9824805985880096 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACCGTAA 25 3.8918224E-5 45.000004 41 TAACGCG 55 6.184564E-11 40.909092 1 CACGACG 245 0.0 40.408165 26 ACGGGAT 750 0.0 40.2 5 TAGCCCG 45 1.929584E-8 40.0 1 TCACGAC 250 0.0 39.600002 25 CTCACGA 250 0.0 39.600002 24 CGTTTTT 4165 0.0 39.327732 1 GTAGGGA 2765 0.0 38.9783 4 ACGGGTA 255 0.0 38.82353 5 CGGGTAC 145 0.0 38.793106 6 TACGGGA 620 0.0 38.46774 4 TAGGGAT 3165 0.0 38.317535 5 AGGGATT 2350 0.0 37.531914 6 CTAACGG 90 0.0 37.5 2 CGGGTAT 240 0.0 37.499996 6 TAAGGGA 2405 0.0 37.42204 4 CGAATAT 265 0.0 37.35849 14 TTAGGGA 2495 0.0 37.334667 4 CGGGATA 350 0.0 37.285713 6 >>END_MODULE