##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547985_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2312863 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.825426322268115 31.0 31.0 31.0 30.0 33.0 2 31.171375909424814 31.0 31.0 33.0 30.0 34.0 3 31.38166376477984 31.0 31.0 34.0 30.0 34.0 4 35.24843538073807 37.0 35.0 37.0 33.0 37.0 5 35.05995167028916 35.0 35.0 37.0 32.0 37.0 6 35.0863112082298 37.0 35.0 37.0 32.0 37.0 7 35.46653390192156 35.0 35.0 37.0 35.0 37.0 8 35.53364552937204 37.0 35.0 37.0 35.0 37.0 9 37.337033365140954 39.0 37.0 39.0 35.0 39.0 10 36.455611508334044 38.0 35.0 39.0 32.0 39.0 11 36.08910601276427 38.0 35.0 39.0 31.0 39.0 12 35.5755377642342 37.0 35.0 39.0 30.0 39.0 13 35.31929042057398 37.0 35.0 39.0 30.0 39.0 14 36.25651930097027 38.0 35.0 40.0 30.0 41.0 15 36.452339373322154 38.0 35.0 40.0 30.0 41.0 16 36.5958580339605 38.0 35.0 40.0 31.0 41.0 17 36.544074594993305 38.0 35.0 40.0 31.0 41.0 18 36.44605019839048 38.0 35.0 40.0 30.0 41.0 19 36.41752364926068 38.0 35.0 40.0 30.0 41.0 20 36.293469608878695 38.0 34.0 40.0 30.0 41.0 21 36.15580602915088 38.0 34.0 40.0 30.0 41.0 22 36.041064689088806 38.0 34.0 40.0 30.0 41.0 23 35.94847727686422 38.0 34.0 40.0 29.0 41.0 24 35.81181808001598 38.0 34.0 40.0 29.0 41.0 25 35.62666098251388 38.0 34.0 40.0 29.0 41.0 26 35.38904984860755 37.0 34.0 40.0 27.0 41.0 27 35.45618352665073 38.0 34.0 40.0 27.0 41.0 28 35.47563604069934 38.0 34.0 40.0 28.0 41.0 29 35.45172195672636 38.0 34.0 40.0 28.0 41.0 30 35.370972253868906 37.0 34.0 40.0 27.0 41.0 31 35.27757156390154 37.0 34.0 40.0 27.0 41.0 32 35.152763479721884 37.0 34.0 40.0 27.0 41.0 33 35.04954033161497 37.0 33.0 40.0 26.0 41.0 34 34.900171778440836 37.0 33.0 40.0 25.0 41.0 35 34.784976023223166 37.0 33.0 40.0 25.0 41.0 36 34.67705999015074 37.0 33.0 40.0 24.0 41.0 37 34.63184762781021 37.0 33.0 40.0 24.0 41.0 38 34.50990179703683 37.0 33.0 40.0 24.0 41.0 39 34.46262619100224 37.0 33.0 40.0 24.0 41.0 40 34.206816400279656 37.0 33.0 40.0 23.0 41.0 41 34.1181168102045 36.0 33.0 40.0 23.0 41.0 42 34.076876581103164 36.0 33.0 40.0 23.0 41.0 43 34.02087542582505 36.0 33.0 40.0 23.0 41.0 44 33.83044521011404 36.0 32.0 40.0 23.0 41.0 45 33.686836185282054 36.0 32.0 40.0 23.0 41.0 46 33.592984539075594 35.0 32.0 40.0 23.0 41.0 47 33.517745754936634 35.0 32.0 40.0 23.0 41.0 48 33.41153107641914 35.0 32.0 39.0 22.0 41.0 49 33.284029361012735 35.0 32.0 39.0 22.0 41.0 50 33.14917528621453 35.0 31.0 39.0 21.0 41.0 51 32.81812454953017 35.0 31.0 39.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 1.0 10 2.0 11 5.0 12 4.0 13 7.0 14 34.0 15 128.0 16 417.0 17 876.0 18 1833.0 19 3356.0 20 5484.0 21 8712.0 22 12434.0 23 17674.0 24 24573.0 25 32714.0 26 41239.0 27 48522.0 28 57386.0 29 67290.0 30 80328.0 31 95906.0 32 114637.0 33 142268.0 34 203135.0 35 229650.0 36 199942.0 37 246082.0 38 319055.0 39 359138.0 40 30.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.53911321163424 24.301266439041136 28.48019964866055 11.67942070066407 2 30.60652533245592 26.75545417086961 28.509384256655064 14.128636240019404 3 30.829841629184262 26.278512821554926 28.907548782612718 13.984096766648088 4 26.519599301817703 28.74450410595007 27.77600748509531 16.959889107136913 5 23.368785786274415 33.49454766667978 28.155191206742465 14.981475340303337 6 21.67482466536064 43.10769812133274 24.924519956434946 10.292957256871677 7 90.30405173155522 3.3295530258385386 4.69344703944851 1.6729482031577314 8 90.53099989061177 2.6620253772056537 4.7437310381116395 2.0632436940709415 9 85.64990663087264 5.284229978169913 6.397568727590004 2.668294663367437 10 42.235748507369436 33.219996169249974 12.384996430830533 12.159258892550055 11 34.34245781094686 26.429105398806584 22.438596665690962 16.78984012455558 12 32.51048592156129 22.85530963139624 26.029557306247714 18.604647140794764 13 25.13931867127452 29.101853417171704 27.26573082798246 18.493097083571314 14 21.01680903711115 31.570871253507015 28.153764403684956 19.258555305696877 15 19.41450920352827 26.617529875310385 34.78359937445495 19.1843615467064 16 23.222646564020437 24.070556708287523 33.39791418687575 19.308882540816295 17 23.02981196897525 23.65929153607455 26.784509069495254 26.526387425454946 18 23.975350031540994 25.83698212994025 29.638288130338893 20.549379708179863 19 26.567894423491577 27.82983687317407 25.530176236119477 20.072092467214876 20 28.930637050270597 26.396159219115013 25.286927933042296 19.3862757975721 21 26.648746596750435 26.840284098106977 27.358516263176853 19.152453041965735 22 26.33506610637984 23.431954248911413 26.74122937675081 23.491750267957936 23 23.015846593594173 29.04988319671334 25.91260269198824 22.02166751770425 24 22.271617471506094 27.160363584008216 30.643449266126012 19.924569678359678 25 23.02583421499674 27.74249923147199 27.655550717876505 21.57611583565477 26 22.490956014255925 29.29274237168393 25.430689150200426 22.785612463859728 27 21.69825882466882 28.705721004659594 27.80437060042035 21.79164957025124 28 19.80099988628812 27.80769980755453 30.722009907201592 21.669290398955752 29 20.794443942421147 27.21873279999723 29.813914615781396 22.172908641800227 30 21.73678250722157 27.488485050779055 29.4129829566213 21.361749485378077 31 26.588820868335045 26.34613463918961 25.31823112739492 21.746813365080424 32 25.806457191800813 27.108825728112734 26.277258964322574 20.807458115763882 33 25.184673713920798 26.716800778947995 25.430645913744133 22.66787959338707 34 21.239044422432286 28.007971073081283 27.56899133238761 23.183993172098823 35 21.989240175488128 27.53630457143376 28.383479695943947 22.090975557134165 36 26.52379323807765 27.472790217146454 25.56995377590458 20.43346276887131 37 22.225354463277764 29.142798341276592 26.078068610203026 22.553778585242622 38 22.438207537584372 30.313944232753947 24.95871999335888 22.289128236302798 39 22.013366118096922 27.98298040134673 25.754962572361613 24.248690908194735 40 25.096557816005532 25.404963458708966 27.227942165186608 22.27053656009889 41 20.70049112290698 24.778034842530662 28.517599183349812 26.003874851212544 42 22.53544632777644 25.641293928780044 26.385177159217815 25.438082584225697 43 22.330548761426854 25.31390748176611 27.06667018323178 25.28887357357526 44 22.027417966390573 26.710185601135912 28.414566708015133 22.84782972445839 45 22.311395011291204 28.456549307070933 25.232493234575504 23.999562447062363 46 22.765507511685733 27.174847796864753 27.12305052223154 22.936594169217976 47 22.57669390707534 27.041549802128355 27.975284312127435 22.40647197866886 48 22.618503560305996 26.824805446755818 28.545356988286812 22.011334004651378 49 23.17015750608661 25.5662354406638 28.173480227752357 23.090126825497233 50 21.40239175428895 27.62640934633828 28.544794914355066 22.426403985017703 51 20.879749470677684 27.696279459699944 27.323840625233746 24.100130444388622 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1133.0 1 1984.5 2 2836.0 3 6688.0 4 10540.0 5 8386.0 6 6232.0 7 6174.5 8 6117.0 9 6562.0 10 7007.0 11 7242.0 12 7477.0 13 7872.0 14 8267.0 15 8226.0 16 8185.0 17 8445.0 18 8705.0 19 9168.0 20 9631.0 21 10285.0 22 10939.0 23 11694.5 24 12450.0 25 14383.5 26 19942.5 27 23568.0 28 26870.0 29 30172.0 30 35912.5 31 41653.0 32 48935.0 33 56217.0 34 60235.5 35 64254.0 36 70710.0 37 77166.0 38 82518.5 39 87871.0 40 101738.0 41 115605.0 42 134113.5 43 152622.0 44 155919.0 45 159216.0 46 163351.0 47 167486.0 48 174862.5 49 182239.0 50 176465.0 51 170691.0 52 160673.5 53 150656.0 54 141827.5 55 132999.0 56 128046.5 57 123094.0 58 114587.0 59 106080.0 60 97822.0 61 89564.0 62 84385.5 63 79207.0 64 70949.0 65 62691.0 66 53759.5 67 44828.0 68 36725.5 69 28623.0 70 24044.0 71 19465.0 72 16365.0 73 13265.0 74 10919.5 75 6532.5 76 4491.0 77 3468.0 78 2445.0 79 1853.0 80 1261.0 81 938.0 82 615.0 83 430.5 84 246.0 85 168.5 86 91.0 87 66.0 88 41.0 89 31.5 90 22.0 91 14.0 92 6.0 93 4.0 94 2.0 95 1.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2312863.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.376905208222944 #Duplication Level Percentage of deduplicated Percentage of total 1 79.67358314794308 16.235010514051055 2 7.065272735937494 2.8793678562088063 3 2.365189447213239 1.4458572349606018 4 1.1802539338596532 0.9619969012756154 5 0.7606740075664242 0.7750091073270046 6 0.5744797638957522 0.7023671815767624 7 0.3976911286159018 0.5672600100970202 8 0.3286485116070424 0.5357471654272209 9 0.2805765845856028 0.5145554220972998 >10 4.532228223127523 23.64697605716771 >50 2.1300084498768155 31.069501463805988 >100 0.7027052848882336 18.65257910356 >500 0.006082146618226664 0.83381916224061 >1k 0.002389414742874761 0.9363756437626131 >5k 2.1721952207952376E-4 0.24357717644177074 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5503 0.2379302189537383 No Hit AGGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT 3046 0.13169824585373194 No Hit GCTCAACTTGACCCTGCATTAGAAATTGAAGACTGTAAATACAAAATAAAA 2911 0.1258613242548305 No Hit GAGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT 2447 0.10579960853712476 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.026374238335776914 0.0 2 0.0 0.0 0.0 0.10683728348804059 0.0 3 0.0 0.0 0.0 0.16153140069256156 0.0 4 0.0 0.0 0.0 0.32414371279232707 0.0 5 0.0 0.0 0.0 0.5733586468372749 0.0 6 0.0 0.0 0.0 0.9445436240711188 0.0 7 0.0 0.0 0.0 1.1024863988917633 0.0 8 0.0 0.0 0.0 1.5024668560135208 0.0 9 0.0 0.0 0.0 1.6397426047284254 0.0 10 0.0 0.0 0.0 1.898469559156768 0.0 11 0.0 0.0 0.0 2.2412914210655797 0.0 12 0.0 0.0 0.0 2.5148917164570492 0.0 13 0.0 0.0 0.0 2.656274928519329 0.0 14 0.0 0.0 0.0 2.714903563246072 0.0 15 0.0 0.0 0.0 2.8075592890715964 0.0 16 0.0 0.0 0.0 2.9632537681652567 0.0 17 0.0 0.0 0.0 3.133129804921433 0.0 18 0.0 0.0 0.0 3.340275666998002 0.0 19 0.0 0.0 0.0 3.464061641351001 0.0 20 0.0 0.0 0.0 3.5938142466717657 0.0 21 0.0 0.0 0.0 3.7706513528903356 0.0 22 0.0 0.0 0.0 3.9562222232791133 0.0 23 0.0 0.0 0.0 4.156450252349577 0.0 24 0.0 0.0 0.0 4.316338667703189 0.0 25 0.0 0.0 0.0 4.4687904125752365 0.0 26 0.0 0.0 0.0 4.602218116680495 0.0 27 0.0 0.0 0.0 4.736726732192958 0.0 28 0.0 0.0 0.0 4.878628781730695 0.0 29 0.0 0.0 0.0 5.039381926210069 0.0 30 0.0 0.0 0.0 5.2373184230972605 0.0 31 0.0 0.0 0.0 5.406070311989945 0.0 32 0.0 0.0 0.0 5.578454063210835 0.0 33 0.0 0.0 0.0 5.749583957199367 0.0 34 0.0 0.0 0.0 5.939435236760673 0.0 35 0.0 0.0 0.0 6.156698429608671 0.0 36 0.0 0.0 0.0 6.341880171890856 0.0 37 0.0 0.0 0.0 6.531169377520415 0.0 38 0.0 0.0 0.0 6.751761777502602 0.0 39 0.0 0.0 0.0 7.090562648976615 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGATCG 25 3.8920363E-5 45.0 9 TATACGG 135 0.0 43.333332 2 CGACGGT 300 0.0 41.25 28 ACGCTAG 90 0.0 40.0 1 TTACGAG 90 0.0 40.0 1 CGTAAGG 340 0.0 39.705883 2 TCACGAC 335 0.0 38.955223 25 TAAGGGA 2905 0.0 38.88124 4 ACGGGAT 790 0.0 38.734177 5 CCACGTA 35 6.2510335E-6 38.571426 33 TAGGGAT 3060 0.0 38.308826 5 CACGACG 335 0.0 38.283585 26 TACGGGA 765 0.0 37.941177 4 TAGTAAG 350 0.0 37.92857 1 TAGGGAC 2080 0.0 37.86058 5 TTAGGGA 2760 0.0 37.744568 4 TGTTACG 60 1.5643309E-10 37.500004 1 ACGCTAA 30 1.1402791E-4 37.500004 7 ATTGGGA 2365 0.0 37.29387 4 GCGTAAG 175 0.0 37.285713 1 >>END_MODULE