##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547984_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1352087 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.847245036746894 31.0 31.0 31.0 30.0 33.0 2 31.18470335118968 31.0 31.0 33.0 30.0 34.0 3 31.38939210272712 31.0 31.0 34.0 30.0 34.0 4 35.261457287881626 37.0 35.0 37.0 33.0 37.0 5 35.06652012777284 35.0 35.0 37.0 32.0 37.0 6 35.09758173845322 37.0 35.0 37.0 32.0 37.0 7 35.47763346589384 35.0 35.0 37.0 35.0 37.0 8 35.54425787689698 37.0 35.0 37.0 35.0 37.0 9 37.350263703445115 39.0 37.0 39.0 35.0 39.0 10 36.528420138644925 38.0 35.0 39.0 32.0 39.0 11 36.12102327734828 38.0 35.0 39.0 31.0 39.0 12 35.31545011526625 37.0 35.0 39.0 30.0 39.0 13 34.844157217693834 37.0 33.0 39.0 27.0 39.0 14 35.73056615439687 38.0 34.0 40.0 27.0 41.0 15 36.09927541644879 38.0 34.0 40.0 30.0 41.0 16 36.30793654550336 38.0 34.0 40.0 31.0 41.0 17 36.25337126974817 38.0 34.0 40.0 30.0 41.0 18 36.18986795968011 38.0 35.0 40.0 30.0 41.0 19 36.11944497654367 38.0 34.0 40.0 30.0 41.0 20 35.96589716490137 37.0 34.0 40.0 30.0 41.0 21 35.84523555067093 37.0 34.0 40.0 30.0 41.0 22 35.709136320369915 37.0 34.0 40.0 29.0 41.0 23 35.68544775595061 37.0 34.0 40.0 29.0 41.0 24 35.555153625469366 37.0 34.0 40.0 29.0 41.0 25 35.35576039115826 37.0 34.0 40.0 29.0 41.0 26 35.113351433746494 36.0 34.0 40.0 27.0 41.0 27 35.13948658629216 36.0 34.0 40.0 27.0 41.0 28 35.197456968375555 36.0 34.0 40.0 27.0 41.0 29 35.22218022952665 36.0 34.0 40.0 28.0 41.0 30 35.14136072604796 36.0 34.0 40.0 27.0 41.0 31 34.9801403312065 36.0 33.0 40.0 27.0 41.0 32 34.84131864295715 36.0 33.0 40.0 27.0 41.0 33 34.71689469686492 36.0 33.0 40.0 26.0 41.0 34 34.56709220634471 36.0 33.0 40.0 25.0 41.0 35 34.426828303208296 36.0 33.0 40.0 24.0 41.0 36 34.271929247156436 36.0 33.0 40.0 24.0 41.0 37 34.14989789858197 36.0 33.0 40.0 23.0 41.0 38 34.0835937332435 36.0 33.0 40.0 23.0 41.0 39 34.02434754568308 36.0 33.0 40.0 23.0 41.0 40 33.792062197181096 36.0 33.0 40.0 23.0 41.0 41 33.71644576125649 35.0 32.0 40.0 23.0 41.0 42 33.66837858806423 35.0 32.0 40.0 23.0 41.0 43 33.593732503899524 35.0 32.0 40.0 23.0 41.0 44 33.42712192336736 35.0 32.0 40.0 22.0 41.0 45 33.28149372044846 35.0 32.0 39.0 22.0 41.0 46 33.24881165191293 35.0 32.0 39.0 22.0 41.0 47 33.189095080420124 35.0 32.0 39.0 22.0 41.0 48 33.095278632218196 35.0 32.0 39.0 22.0 41.0 49 32.98752003384398 35.0 31.0 39.0 21.0 41.0 50 32.83555496059056 35.0 31.0 39.0 20.0 41.0 51 32.48678598344633 35.0 31.0 38.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 1.0 13 10.0 14 35.0 15 71.0 16 214.0 17 547.0 18 1207.0 19 2074.0 20 3554.0 21 5319.0 22 8002.0 23 11401.0 24 15629.0 25 20573.0 26 26045.0 27 30273.0 28 35036.0 29 41413.0 30 48783.0 31 58306.0 32 70259.0 33 88703.0 34 134549.0 35 154697.0 36 108119.0 37 130801.0 38 168816.0 39 187626.0 40 22.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.81528925283654 24.47394287497772 28.314967897775812 12.39579997440993 2 30.329483235916033 26.634306816055474 29.150934814105895 13.885275133922596 3 30.104571673272506 26.225827184197463 29.634261700615415 14.03533944191461 4 27.149658269031505 28.67101007553508 29.217942336550827 14.961389318882587 5 23.353009088912177 34.238921016177216 28.336933939901797 14.071135955008812 6 22.480727941323302 43.4446895798865 23.932631554034614 10.141950924755582 7 90.43478711059274 3.6414816502192533 4.5537750159568136 1.3699562232311973 8 90.4611167772488 3.2188757084418387 4.483883063737762 1.836124450571598 9 85.45692695810256 6.085185346800909 5.897549492007541 2.5603382030890023 10 46.51165198689138 32.23520379975549 10.972296901013026 10.280847312340107 11 41.73533211990057 22.1688397270294 21.42902046983663 14.666807683233401 12 38.25530457729421 21.38893429195015 24.33696944057594 16.0187916901797 13 25.27832898326809 33.26590670570755 24.782428941332917 16.673335369691447 14 19.20786162428897 36.344480791546694 27.144924845812433 17.302732738351896 15 17.634959880540233 26.11917724229284 39.73043154767408 16.51543132949285 16 22.04473528700446 21.834689631658318 37.735885338739294 18.384689742597924 17 21.44728852507272 22.45099612672853 26.542818620399427 29.558896727799322 18 23.55085138752166 24.684358329012852 31.64478321291455 20.120007070550933 19 28.693567795563453 25.685847138534722 25.018286545170543 20.602298520731285 20 29.624055256799302 26.5402300295765 24.45493522236365 19.380779491260547 21 25.91149829855623 27.20032068942309 27.29728190567619 19.59089910634449 22 25.37403288397862 23.314993783684038 26.24660987051869 25.064363461818655 23 21.545359137392786 28.926910768315945 26.014820052259953 23.51291004203132 24 22.093992472377888 26.433062369507287 32.84892170400278 18.624023454112052 25 21.92529031046079 25.70300579770385 31.330898085700102 21.040805806135257 26 20.411778236163798 31.869546856082486 25.08255755731695 22.63611735043677 27 20.67736765459619 31.365363323513947 28.166012985850763 19.7912560360391 28 18.260585302572984 28.644754368616816 33.16125367672347 19.933406652086738 29 19.632908237413716 27.039236380499183 32.077077880343495 21.2507775017436 30 22.14975811467753 28.816932638210414 29.323926640815273 19.709382606296785 31 28.228287085076627 26.69229125048906 25.178853135929863 19.900568528504454 32 29.385239263449765 26.52299741066958 25.046613124747154 19.045150201133506 33 27.50910259472948 26.46893284233929 24.943883048945814 21.078081513985417 34 21.500243697336042 28.330573402451176 27.031766446981592 23.13741645323119 35 22.001320920917074 26.934065633350517 28.51184871979392 22.55276472593849 36 29.35018234773354 25.449545776270316 26.08759643425312 19.112675441743026 37 22.532203918830668 30.24738792696032 27.14766135611096 20.072746798098052 38 22.400703505025934 30.98151228434265 24.07204565978373 22.545738550847688 39 21.640471360200934 29.782033256735694 26.576322381621893 22.001173001441476 40 24.75543363703667 26.135966102772972 25.68769613197967 23.420904128210683 41 20.363038768954954 24.0944554603365 28.306536487666843 27.2359692830417 42 22.567334794284687 25.974955753586865 26.187146241329145 25.270563210799306 43 22.284734636158767 25.6257918314428 27.017640137062187 25.071833395336245 44 21.950954339476674 27.151063504049667 27.91980101872143 22.97818113775223 45 20.185535398239907 31.888406589220956 24.71889752656449 23.207160485974647 46 24.076705123264997 29.425473360811843 25.904176284514236 20.593645231408924 47 22.27386255470247 27.774544093686277 26.796056762619564 23.155536588991684 48 22.748905950578624 26.31857269539608 29.65252975585151 21.279991598173787 49 23.217514849266358 23.881229536265046 30.219061347383715 22.682194267084885 50 22.200198655855726 28.85346874868259 27.469460175269788 21.476872420191896 51 20.756134775350997 30.44811465534392 24.928425463746045 23.867325105559036 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 812.0 1 1251.0 2 1690.0 3 4106.0 4 6522.0 5 5207.0 6 3892.0 7 4054.5 8 4217.0 9 4616.5 10 5016.0 11 5325.0 12 5634.0 13 5816.0 14 5998.0 15 6029.0 16 6060.0 17 5922.0 18 5784.0 19 5859.5 20 5935.0 21 6130.5 22 6326.0 23 6482.0 24 6638.0 25 7459.5 26 10093.0 27 11905.0 28 13914.0 29 15923.0 30 18755.5 31 21588.0 32 23970.0 33 26352.0 34 29207.5 35 32063.0 36 35425.0 37 38787.0 38 42846.5 39 46906.0 40 62451.5 41 77997.0 42 92838.0 43 107679.0 44 112719.5 45 117760.0 46 115388.5 47 113017.0 48 108117.5 49 103218.0 50 98149.5 51 93081.0 52 88575.0 53 84069.0 54 76708.0 55 69347.0 56 68122.5 57 66898.0 58 64202.0 59 61506.0 60 56790.0 61 52074.0 62 46874.5 63 41675.0 64 36327.5 65 30980.0 66 26976.0 67 22972.0 68 19009.5 69 15047.0 70 13247.0 71 11447.0 72 9350.5 73 7254.0 74 5940.0 75 3515.5 76 2405.0 77 1889.5 78 1374.0 79 1080.0 80 786.0 81 540.5 82 295.0 83 216.0 84 137.0 85 106.5 86 76.0 87 51.0 88 26.0 89 17.5 90 9.0 91 4.5 92 0.0 93 0.5 94 1.0 95 1.0 96 1.0 97 1.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1352087.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.06627304095235 #Duplication Level Percentage of deduplicated Percentage of total 1 81.48288622714503 16.35057843198748 2 6.332196965403253 2.541271865137431 3 1.9517408848926827 1.1749249650433957 4 1.0256423498128162 0.8232327773483175 5 0.6169898569297655 0.6190343466325401 6 0.4509457472150685 0.5429280294164307 7 0.3640050919025715 0.5112957893689768 8 0.29249581568191513 0.46954407206475046 9 0.2602598213202044 0.4700200172580624 >10 4.084812200574418 21.623970814644707 >50 2.3791219142739406 34.28397803432408 >100 0.7544014750716661 19.599189441031108 >500 0.003376237332493782 0.4770999933833216 >1k 0.0011254124441645939 0.5129314223594121 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3322 0.2456942489647486 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 2373 0.17550645779450583 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 7.395973779793756E-5 0.0 0.0 0.02152228369919983 0.0 2 7.395973779793756E-5 0.0 0.0 0.09659141756410645 0.0 3 7.395973779793756E-5 0.0 0.0 0.14429544844377618 0.0 4 7.395973779793756E-5 0.0 0.0 0.28733358134498743 0.0 5 7.395973779793756E-5 0.0 0.0 0.48199561122915907 0.0 6 7.395973779793756E-5 0.0 0.0 0.7390796598147901 0.0 7 7.395973779793756E-5 0.0 0.0 0.8379638292506325 0.0 8 7.395973779793756E-5 0.0 0.0 1.1106533825116283 0.0 9 7.395973779793756E-5 0.0 0.0 1.1889767448396442 0.0 10 7.395973779793756E-5 0.0 0.0 1.358714343085911 0.0 11 7.395973779793756E-5 0.0 0.0 1.6081065789405564 0.0 12 7.395973779793756E-5 0.0 0.0 1.799218541410427 0.0 13 7.395973779793756E-5 0.0 0.0 1.8822753269575108 0.0 14 7.395973779793756E-5 0.0 0.0 1.917554121887127 0.0 15 7.395973779793756E-5 0.0 0.0 1.9746510394671348 0.0 16 7.395973779793756E-5 0.0 0.0 2.1043024598269193 0.0 17 7.395973779793756E-5 0.0 0.0 2.245639518758778 0.0 18 7.395973779793756E-5 0.0 0.0 2.4287638295464715 0.0 19 7.395973779793756E-5 0.0 0.0 2.520695783629308 0.0 20 7.395973779793756E-5 0.0 0.0 2.617509080406808 0.0 21 7.395973779793756E-5 0.0 0.0 2.747900098144572 0.0 22 7.395973779793756E-5 0.0 0.0 2.8882756804850573 0.0 23 7.395973779793756E-5 0.0 0.0 3.0352336794895596 0.0 24 7.395973779793756E-5 0.0 0.0 3.146099326448668 0.0 25 7.395973779793756E-5 0.0 0.0 3.241803227159199 0.0 26 7.395973779793756E-5 0.0 0.0 3.335584174686984 0.0 27 7.395973779793756E-5 0.0 0.0 3.4440091502987604 0.0 28 7.395973779793756E-5 0.0 0.0 3.546443387148904 0.0 29 7.395973779793756E-5 0.0 0.0 3.6699561492714596 0.0 30 7.395973779793756E-5 0.0 0.0 3.802344079929768 0.0 31 7.395973779793756E-5 0.0 0.0 3.9341403326856925 0.0 32 7.395973779793756E-5 0.0 0.0 4.0444143017424175 0.0 33 7.395973779793756E-5 0.0 0.0 4.172660487084041 0.0 34 7.395973779793756E-5 0.0 0.0 4.318952848448362 0.0 35 7.395973779793756E-5 0.0 0.0 4.483143466359783 0.0 36 7.395973779793756E-5 0.0 0.0 4.6289181095595175 0.0 37 7.395973779793756E-5 0.0 0.0 4.763524832351765 0.0 38 7.395973779793756E-5 0.0 0.0 4.93259679295785 0.0 39 7.395973779793756E-5 0.0 0.0 5.217489702955505 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCGTATT 25 3.8911712E-5 45.000004 29 GTATACG 50 2.1827873E-11 45.000004 1 TATAACG 25 3.8911712E-5 45.000004 28 ACCGGAT 20 7.033729E-4 45.0 45 CGTATTA 20 7.033729E-4 45.0 38 CACGATA 20 7.033729E-4 45.0 39 TACGGGT 55 1.8189894E-12 45.0 4 CACGGGT 30 2.165787E-6 44.999996 4 TCTAGCG 30 2.165787E-6 44.999996 1 TACGGGA 530 0.0 42.877357 4 CGCATCG 85 0.0 42.35294 21 TCACGAC 210 0.0 41.785717 25 CGGTCTA 205 0.0 41.70732 31 CGTTAGG 130 0.0 41.53846 2 CGACGGT 210 0.0 40.714287 28 ACGGTCT 210 0.0 40.714287 30 CGTAAGG 255 0.0 40.588234 2 TTACGGG 390 0.0 40.384613 3 AGGGCGA 1475 0.0 40.11864 6 ATCGTCC 45 1.9286745E-8 40.000004 15 >>END_MODULE