SRR1547982_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547982_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	2408966
Sequences flagged as poor quality	0
Sequence length	51
%GC	43

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	29382	1.2196934286328656	No Hit
CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2737	0.11361721169995757	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TTCGATA	20	7.034828E-4	45.0	15
CGTTTTT	16725	0.0	42.228703	1
TAGGGCG	785	0.0	39.55414	5
CGGTTTT	1610	0.0	38.571426	1
TAAGGGA	3515	0.0	38.470837	4
TAGGGAC	2785	0.0	38.294437	5
AGGGCGA	1975	0.0	38.16456	6
TACGGGA	1030	0.0	38.00971	4
TAGGGAT	4370	0.0	37.99771	5
TTAGGGA	3630	0.0	37.871902	4
CGACCAA	410	0.0	37.865852	29
GGGCGAT	4005	0.0	37.69663	7
ACGGGAT	1125	0.0	37.6	5
GTACGCG	60	1.5643309E-10	37.499996	1
ATAGGGA	4070	0.0	37.426292	4
AAGGGAT	4275	0.0	37.31579	5
AAGGGAC	2950	0.0	37.296608	5
GTAGGGA	3705	0.0	37.22672	4
AGGGATT	5175	0.0	37.217392	6
TAGGGAG	2995	0.0	36.88648	5