##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547982_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2408966 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.870431131032984 31.0 31.0 31.0 30.0 33.0 2 31.169833862329316 31.0 31.0 33.0 30.0 34.0 3 31.12949995973376 31.0 31.0 34.0 28.0 34.0 4 35.13680765938581 35.0 35.0 37.0 32.0 37.0 5 35.05702529633046 35.0 35.0 37.0 32.0 37.0 6 35.12264058521374 37.0 35.0 37.0 32.0 37.0 7 35.56198800647249 36.0 35.0 37.0 35.0 37.0 8 35.66466359425579 37.0 35.0 37.0 35.0 37.0 9 37.47594445085568 39.0 37.0 39.0 35.0 39.0 10 36.63631159592954 39.0 37.0 39.0 32.0 39.0 11 36.220874848378934 38.0 35.0 39.0 31.0 39.0 12 35.94547204070128 38.0 35.0 39.0 31.0 39.0 13 35.842409149817804 38.0 35.0 39.0 30.0 39.0 14 36.84889699564045 39.0 35.0 41.0 31.0 41.0 15 36.98608033488227 39.0 35.0 41.0 31.0 41.0 16 37.04672129037936 39.0 35.0 41.0 31.0 41.0 17 36.96699496796551 39.0 35.0 41.0 31.0 41.0 18 36.79385263220818 39.0 35.0 40.0 31.0 41.0 19 36.68855309705492 38.0 35.0 40.0 31.0 41.0 20 36.48858431376782 38.0 35.0 40.0 30.0 41.0 21 36.39189967811916 38.0 35.0 40.0 30.0 41.0 22 36.300326779207346 38.0 35.0 40.0 30.0 41.0 23 36.21671621766351 38.0 34.0 40.0 30.0 41.0 24 36.08623160310274 38.0 34.0 40.0 30.0 41.0 25 35.93115469458681 38.0 34.0 40.0 30.0 41.0 26 35.71129480449288 38.0 34.0 40.0 29.0 41.0 27 35.78352413442116 38.0 34.0 40.0 29.0 41.0 28 35.77108311200739 38.0 34.0 40.0 29.0 41.0 29 35.72924275394505 38.0 34.0 40.0 29.0 41.0 30 35.6086424631979 38.0 34.0 40.0 29.0 41.0 31 35.463958395427746 38.0 34.0 40.0 27.0 41.0 32 35.26395142148125 38.0 34.0 40.0 27.0 41.0 33 34.980497441640935 38.0 33.0 40.0 25.0 41.0 34 34.63741206808232 38.0 33.0 40.0 24.0 41.0 35 34.37937355695348 38.0 33.0 40.0 23.0 41.0 36 34.27815668631272 38.0 33.0 40.0 22.0 41.0 37 34.21643559934013 38.0 33.0 40.0 22.0 41.0 38 34.123360811236026 37.0 33.0 40.0 21.0 41.0 39 34.06427820068859 37.0 33.0 40.0 21.0 41.0 40 33.91332173222868 37.0 33.0 40.0 20.0 41.0 41 33.81157019235639 37.0 33.0 40.0 20.0 41.0 42 33.77416866821699 37.0 33.0 40.0 19.0 41.0 43 33.72534232529642 37.0 33.0 40.0 19.0 41.0 44 33.575236429239766 37.0 32.0 40.0 18.0 41.0 45 33.4690767740184 37.0 32.0 40.0 19.0 41.0 46 33.42257964620505 37.0 32.0 40.0 19.0 41.0 47 33.370500040266236 36.0 32.0 40.0 19.0 41.0 48 33.25542784746651 36.0 32.0 40.0 18.0 41.0 49 33.121370330672995 36.0 31.0 40.0 18.0 41.0 50 33.02854959347704 36.0 31.0 40.0 18.0 41.0 51 32.73337772305628 35.0 31.0 39.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 0.0 10 2.0 11 2.0 12 4.0 13 9.0 14 43.0 15 116.0 16 327.0 17 789.0 18 1758.0 19 3369.0 20 5644.0 21 8820.0 22 13253.0 23 19313.0 24 28493.0 25 42109.0 26 55066.0 27 61733.0 28 63926.0 29 68770.0 30 76937.0 31 90384.0 32 107652.0 33 133287.0 34 181081.0 35 205430.0 36 206905.0 37 254789.0 38 348790.0 39 430120.0 40 44.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.026990833411517 23.272308534034934 28.265239110888242 18.43546152166531 2 33.88130010967361 25.359303535209715 27.822850135701376 12.936546219415302 3 27.574029687426055 25.436847178415967 34.019658226807685 12.96946490735029 4 24.584987915977226 27.535506935340727 33.81135308676004 14.068152061922005 5 22.37258641259362 31.237842294162725 32.62623880951413 13.763332483729535 6 21.194653639777396 40.05095962334047 29.1055996639222 9.648787072959934 7 86.80176474055673 2.479404026457825 9.549242289015288 1.1695889439701517 8 87.42302714110536 2.006337988996109 9.376055950976477 1.1945789189220604 9 82.54545726257656 4.887657193999417 10.548965821850537 2.0179197215734885 10 36.819573211078946 37.963923110579394 15.752899791860905 9.463603886480755 11 25.786250200293402 25.07478312271738 32.17073217305682 16.968234503932393 12 26.619595295242853 22.574374233592337 32.74458834205215 18.061442129112656 13 23.896144652934083 24.03462730482705 33.41969127003038 18.649536772208492 14 18.60474577059203 27.124168626705398 34.12696567739022 20.144119925312353 15 18.51578644115359 26.88369200727615 37.319912360739 17.280609190831253 16 23.578290436643773 25.47516237256981 34.802732790749225 16.143814400037193 17 22.76150846462756 25.1609196642875 32.473559195106944 19.60401267597799 18 22.257806876477293 25.668149737273172 33.96984432324906 18.104199063000472 19 24.169415425539423 27.042805917559647 31.048757018571454 17.739021638329476 20 25.10272042029651 27.70520630013043 30.803880170994525 16.388193108578538 21 24.715583366473417 25.627509894286593 32.710258260183004 16.94664847905699 22 23.21390173211245 23.875015255507964 33.5997270198085 19.311355992571087 23 21.12445754734604 26.43104967027347 33.409770000904956 19.034722781475537 24 20.559526369404963 26.77518072069095 34.253243922911324 18.41204898699276 25 21.859918321802798 27.513007655566746 31.593887169847978 19.033186852782478 26 20.637651174819403 28.947938659159156 30.766602766498156 19.64780739952328 27 19.551583542482543 28.11094054461541 33.10930913927386 19.22816677362819 28 18.959171694411626 28.141119467854676 33.85161932546993 19.04808951226377 29 20.66205998756313 27.193783556928576 33.14476003397308 18.999396421535213 30 21.962244382029468 25.94515655264541 33.16182129594191 18.930777769383212 31 22.73299000484025 26.818892421063644 31.603393323110414 18.844724250985692 32 23.6712348783669 26.928732078410405 31.36225251830038 18.03778052492231 33 23.242295657140865 27.497938949740263 30.636879059314243 18.62288633380463 34 21.164308670192938 28.01106366798037 32.026603945427205 18.798023716399484 35 20.878335352180148 28.583259373523745 31.069222230616788 19.469183043679323 36 22.035055704397656 29.436114914033656 29.62511716645233 18.90371221511636 37 21.61545659008886 30.41030882129511 29.362141267249104 18.612093321366928 38 21.557838508306055 29.767169814766998 29.081813524972954 19.593178151953992 39 21.09515036741905 28.9212051975827 29.263841830893423 20.71980260410483 40 22.445480758134405 28.076818020677752 29.740311818431643 19.737389402756204 41 19.939675362790506 28.74860002175207 30.124003410591932 21.18772120486549 42 20.849484799702445 28.927141354423437 29.530595284449845 20.69277856142428 43 20.92736053559909 28.452788457786454 29.547075384210487 21.07277562240397 44 20.85222456439817 29.146986715462152 29.369945445473284 20.63084327466639 45 20.48891516111062 29.19119655487043 28.767280235586558 21.552608048432397 46 20.699877042681383 29.613701480220143 29.035777175767528 20.650644301330946 47 20.40518629154583 28.957071208144907 30.22226133536131 20.41548116494795 48 20.743671766226672 28.26046527846387 30.65028730168877 20.34557565362068 49 21.181411443748065 27.87473961857494 30.155386169833864 20.788462767843132 50 19.68292620153211 29.130133011424817 30.374816415009594 20.812124372033477 51 19.4229391365424 29.19700817695227 30.181663003961035 21.198389682544295 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1173.0 1 1965.5 2 2758.0 3 26809.5 4 50861.0 5 38131.5 6 25402.0 7 23139.0 8 20876.0 9 21269.0 10 21662.0 11 21730.0 12 21798.0 13 21643.5 14 21489.0 15 20416.5 16 19344.0 17 18385.5 18 17427.0 19 17033.5 20 16640.0 21 17407.5 22 18175.0 23 18609.0 24 19043.0 25 21518.5 26 28354.0 27 32714.0 28 37914.5 29 43115.0 30 50149.5 31 57184.0 32 63701.0 33 70218.0 34 78461.0 35 86704.0 36 92486.0 37 98268.0 38 106241.0 39 114214.0 40 122452.0 41 130690.0 42 137400.0 43 144110.0 44 150283.0 45 156456.0 46 161677.0 47 166898.0 48 166247.0 49 165596.0 50 160390.0 51 155184.0 52 145888.0 53 136592.0 54 127453.5 55 118315.0 56 112731.0 57 107147.0 58 101240.0 59 95333.0 60 87187.5 61 79042.0 62 69551.5 63 60061.0 64 50143.0 65 40225.0 66 33098.0 67 25971.0 68 21215.0 69 16459.0 70 13555.0 71 10651.0 72 8954.0 73 7257.0 74 5773.0 75 3547.5 76 2806.0 77 2099.5 78 1393.0 79 1106.5 80 820.0 81 581.0 82 342.0 83 234.5 84 127.0 85 99.0 86 71.0 87 55.0 88 39.0 89 28.5 90 18.0 91 14.5 92 11.0 93 7.0 94 3.0 95 2.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2408966.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 25.830853732490493 #Duplication Level Percentage of deduplicated Percentage of total 1 70.91195822409959 18.31716420771193 2 6.962337934844563 3.5968626566227964 3 3.285103084642113 2.5457105182663127 4 2.215370237966421 2.288996183208931 5 1.6110390609149976 2.0807257169912075 6 1.269053904830218 1.9668447476589161 7 1.0591959871109253 1.915195563197224 8 0.952462177679052 1.968232895788557 9 0.8247189596856962 1.9172875336247648 >10 10.67553006182176 57.44733387798671 >50 0.20925622531334123 3.272719152163587 >100 0.022004171812256758 1.012339950706177 >500 0.0016416410659059728 0.30858111408321154 >1k 1.6416410659059728E-4 0.1160624583270235 >5k 0.0 0.0 >10k+ 1.6416410659059728E-4 1.2459434236626248 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 29382 1.2196934286328656 No Hit CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2737 0.11361721169995757 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.151158629885187E-5 0.0 0.0 0.013657311892322267 0.0 2 4.151158629885187E-5 0.0 0.0 0.04748925472588654 0.0 3 4.151158629885187E-5 0.0 0.0 0.09352560393131328 0.0 4 4.151158629885187E-5 0.0 0.0 0.13856567506556755 0.0 5 4.151158629885187E-5 0.0 0.0 0.27185937867118093 0.0 6 4.151158629885187E-5 0.0 0.0 0.5647651315958797 0.0 7 4.151158629885187E-5 0.0 0.0 0.7766817796515185 0.0 8 4.151158629885187E-5 0.0 0.0 1.109438655423115 0.0 9 4.151158629885187E-5 0.0 0.0 1.38694360983094 0.0 10 4.151158629885187E-5 0.0 0.0 1.7034694553596854 0.0 11 4.151158629885187E-5 0.0 0.0 1.9605091977221762 0.0 12 4.151158629885187E-5 0.0 0.0 2.1459414537191477 0.0 13 4.151158629885187E-5 0.0 0.0 2.2642494746708755 0.0 14 4.151158629885187E-5 0.0 0.0 2.3633791427525335 0.0 15 4.151158629885187E-5 0.001660463451954075 0.0 2.434239420564674 0.0 16 4.151158629885187E-5 0.001660463451954075 0.0 2.514024689431067 0.0 17 4.151158629885187E-5 0.001660463451954075 0.0 2.605640760392633 0.0 18 4.151158629885187E-5 0.001660463451954075 0.0 2.7234506423087748 0.0 19 4.151158629885187E-5 0.001660463451954075 0.0 2.806971953942065 0.0 20 4.151158629885187E-5 0.001660463451954075 0.0 2.8998333724925964 0.0 21 4.151158629885187E-5 0.001660463451954075 0.0 2.9939816502183922 0.0 22 4.151158629885187E-5 0.001660463451954075 0.0 3.110878277235959 0.0 23 4.151158629885187E-5 0.001660463451954075 0.0 3.236243267858492 0.0 24 4.151158629885187E-5 0.001660463451954075 0.0 3.3398146756741274 0.0 25 4.151158629885187E-5 0.001660463451954075 0.0 3.4359970211285673 0.0 26 4.151158629885187E-5 0.001660463451954075 0.0 3.5342964574842486 0.0 27 4.151158629885187E-5 0.001660463451954075 0.0 3.645505997178873 0.0 28 4.151158629885187E-5 0.001660463451954075 0.0 3.7505718221012665 0.0 29 4.151158629885187E-5 0.001660463451954075 0.0 3.8729894900965807 0.0 30 4.151158629885187E-5 0.001660463451954075 0.0 4.019276320213735 0.0 31 4.151158629885187E-5 0.001660463451954075 0.0 4.15829862272859 0.0 32 4.151158629885187E-5 0.001660463451954075 0.0 4.295369880687399 0.0 33 4.151158629885187E-5 0.001660463451954075 0.0 4.424304867731633 0.0 34 4.151158629885187E-5 0.001660463451954075 0.0 4.565527284320327 0.0 35 4.151158629885187E-5 0.001660463451954075 0.0 4.715218064513986 0.0 36 4.151158629885187E-5 0.001660463451954075 0.0 4.869433607614221 0.0 37 4.151158629885187E-5 0.001660463451954075 0.0 5.029253214864801 0.0 38 7.056969670804818E-4 0.001660463451954075 0.0 5.224274647296807 0.0 39 7.056969670804818E-4 0.001660463451954075 0.0 5.519463537467943 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTCGATA 20 7.034828E-4 45.0 15 CGTTTTT 16725 0.0 42.228703 1 TAGGGCG 785 0.0 39.55414 5 CGGTTTT 1610 0.0 38.571426 1 TAAGGGA 3515 0.0 38.470837 4 TAGGGAC 2785 0.0 38.294437 5 AGGGCGA 1975 0.0 38.16456 6 TACGGGA 1030 0.0 38.00971 4 TAGGGAT 4370 0.0 37.99771 5 TTAGGGA 3630 0.0 37.871902 4 CGACCAA 410 0.0 37.865852 29 GGGCGAT 4005 0.0 37.69663 7 ACGGGAT 1125 0.0 37.6 5 GTACGCG 60 1.5643309E-10 37.499996 1 ATAGGGA 4070 0.0 37.426292 4 AAGGGAT 4275 0.0 37.31579 5 AAGGGAC 2950 0.0 37.296608 5 GTAGGGA 3705 0.0 37.22672 4 AGGGATT 5175 0.0 37.217392 6 TAGGGAG 2995 0.0 36.88648 5 >>END_MODULE