##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547981_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3043072 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.801706630667958 31.0 31.0 31.0 30.0 33.0 2 31.146669221102886 31.0 31.0 33.0 30.0 34.0 3 31.339169760031968 31.0 31.0 34.0 30.0 34.0 4 35.194556027593165 35.0 35.0 37.0 33.0 37.0 5 35.01177001398587 35.0 35.0 37.0 32.0 37.0 6 35.03216650805502 36.0 35.0 37.0 32.0 37.0 7 35.476150087806005 35.0 35.0 37.0 35.0 37.0 8 35.555575747139734 37.0 35.0 37.0 35.0 37.0 9 37.33583431479768 39.0 37.0 39.0 35.0 39.0 10 36.42779894790527 38.0 35.0 39.0 32.0 39.0 11 36.01649747360562 38.0 35.0 39.0 31.0 39.0 12 35.57873195244805 37.0 35.0 39.0 30.0 39.0 13 35.37509529843526 37.0 35.0 39.0 30.0 39.0 14 36.3459806406158 38.0 35.0 40.0 30.0 41.0 15 36.53375700607807 38.0 35.0 40.0 30.0 41.0 16 36.63792673982081 38.0 35.0 40.0 31.0 41.0 17 36.55564442773618 38.0 35.0 40.0 31.0 41.0 18 36.47235852454362 38.0 35.0 40.0 30.0 41.0 19 36.439555488664084 38.0 35.0 40.0 30.0 41.0 20 36.343572876356525 38.0 34.0 40.0 30.0 41.0 21 36.22550403013797 38.0 34.0 40.0 30.0 41.0 22 36.1065893281526 38.0 34.0 40.0 30.0 41.0 23 36.03517366661058 38.0 34.0 40.0 30.0 41.0 24 35.91729771756961 38.0 34.0 40.0 29.0 41.0 25 35.75300913024733 38.0 34.0 40.0 29.0 41.0 26 35.50073412656684 38.0 34.0 40.0 27.0 41.0 27 35.58473575386977 38.0 34.0 40.0 28.0 41.0 28 35.608514356544966 38.0 34.0 40.0 29.0 41.0 29 35.59637267866156 38.0 34.0 40.0 29.0 41.0 30 35.51652080529149 38.0 34.0 40.0 28.0 41.0 31 35.44989175412215 38.0 34.0 40.0 27.0 41.0 32 35.34355053051653 38.0 34.0 40.0 27.0 41.0 33 35.23109673382687 38.0 34.0 40.0 27.0 41.0 34 35.094022093463444 38.0 34.0 40.0 26.0 41.0 35 34.96365777740389 38.0 33.0 40.0 25.0 41.0 36 34.918982199566756 38.0 33.0 40.0 25.0 41.0 37 34.89063650153529 38.0 33.0 40.0 25.0 41.0 38 34.81337838868091 37.0 33.0 40.0 25.0 41.0 39 34.77797436274922 37.0 33.0 40.0 25.0 41.0 40 34.595713804997054 37.0 33.0 40.0 24.0 41.0 41 34.51009341875579 37.0 33.0 40.0 24.0 41.0 42 34.479662985299065 37.0 33.0 40.0 24.0 41.0 43 34.43244721123917 37.0 33.0 40.0 24.0 41.0 44 34.3078793403508 37.0 33.0 40.0 23.0 41.0 45 34.17785908450408 37.0 33.0 40.0 23.0 41.0 46 34.08923285416842 36.0 33.0 40.0 23.0 41.0 47 34.0286900868596 36.0 33.0 40.0 23.0 41.0 48 33.93572482018171 36.0 33.0 40.0 23.0 41.0 49 33.790903731492385 36.0 32.0 40.0 23.0 41.0 50 33.66749718705308 36.0 32.0 40.0 23.0 41.0 51 33.313821690712544 35.0 31.0 39.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 3.0 13 19.0 14 64.0 15 148.0 16 407.0 17 902.0 18 1936.0 19 3614.0 20 6259.0 21 9755.0 22 14614.0 23 21015.0 24 29539.0 25 39762.0 26 51260.0 27 61135.0 28 71743.0 29 85645.0 30 103070.0 31 123647.0 32 148736.0 33 184238.0 34 259900.0 35 291439.0 36 264390.0 37 321318.0 38 431563.0 39 516891.0 40 58.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.604035658702784 25.437781294691682 28.729192079582738 12.2289909670228 2 30.063994542357197 26.896175969546565 29.416720997728614 13.623108490367628 3 29.8581827837133 26.225340708336837 30.167508359973077 13.74896814797678 4 25.692326701438546 29.29904386094052 29.498776236645075 15.509853200975856 5 23.56013922772777 33.431216875578365 28.160621897871625 14.848021998822242 6 22.557928304029613 41.849124831748966 25.415534039286612 10.177412824934803 7 90.70787677715151 3.0486626671994617 4.836625620425675 1.4068349352233533 8 90.64317242575923 2.716925527887608 4.585727843442416 2.054174202910743 9 85.1351857596534 5.889016099520485 6.323806995036595 2.651991145789518 10 40.60002523765458 36.72197042988138 11.960216518044923 10.717787814419113 11 31.958626020021875 25.623580381929838 25.63080991839825 16.78698367965004 12 31.14895079708926 23.394812873306975 27.39563835492555 18.06059797467822 13 24.981597543534953 28.391539864978547 28.278496203836124 18.348366387650376 14 19.005005468158494 31.461628249348028 29.475247381593338 20.058118900900144 15 18.89945423571969 27.903710461007826 35.461927946496175 17.73490735677631 16 22.85614668335156 26.30611434760663 33.15508144401447 17.68265752502734 17 22.495524259695465 26.013350982165388 28.09203988600993 23.399084872129215 18 23.28495678051653 26.689969872549845 30.44663419071254 19.57843915622108 19 25.46219741103727 28.02059892109027 26.394741892403466 20.122461775469 20 27.478482270547655 27.802004027509042 26.06671810591402 18.652795596029275 21 25.304494931437706 27.583803472280643 28.978315333978294 18.133386262303354 22 24.343886703962312 24.946238537898545 28.506456633296878 22.203418124842266 23 22.098754153697318 28.764288192983933 28.111066711533606 21.025890941785143 24 21.80622081896189 27.041161037267603 31.528764353916046 19.62385378985446 25 21.536230493396147 28.69320870488769 28.56711901657273 21.203441785143433 26 20.93292567510726 31.51591549591991 26.47594273155548 21.075216097417346 27 20.42741676831833 30.04956833094978 28.817491009085554 20.705523891646337 28 19.301843663245563 29.689866030116935 30.65224878018003 20.356041526457474 29 20.149835429460754 27.339379416589555 30.730590666274082 21.78019448767561 30 21.552957011861697 28.234560339025826 29.718981345166988 20.493501303945486 31 23.54347843232102 28.326046836880625 27.45265310843779 20.67782162236056 32 24.718738169849416 28.074524690838732 27.14194734794313 20.064789791368725 33 23.79260168671658 27.995525574156645 27.128506982417765 21.08336575670901 34 20.577988296037688 27.984286931101206 29.65953483847901 21.778189934382098 35 20.871277445949357 27.699213163540005 29.680467632708 21.749041757802644 36 23.837950597291158 28.6106276815008 27.331032588121477 20.220389133086567 37 21.216323504668967 29.562067542273073 28.45893886178178 20.762670091276185 38 21.588447463615715 29.841324819130143 27.134290611592498 21.435937105661647 39 21.125329929755196 28.862149827542694 28.022833505089594 21.98968673761252 40 23.756749758139144 26.854836165559014 27.905353537477918 21.483060538823924 41 19.938470072347943 26.619449030453435 29.067304355598555 24.374776541600067 42 21.650818646420458 27.71837143518129 26.831307310507274 23.799502607890975 43 21.24047672877934 27.2082619142761 28.145571317405572 23.405690039538992 44 20.797503312442164 28.634879490199378 27.65853059014049 22.90908660721797 45 20.44394611760747 28.93385368469757 27.264455129553294 23.357745068141668 46 21.482666200471105 29.2599386409523 27.37878039034239 21.878614768234208 47 20.8350640405485 27.841897924202915 29.01380578573231 22.309232249516278 48 21.574382729031715 26.9178317174224 29.620298172373182 21.88748738117271 49 21.469028665769326 26.55359452553209 29.61977238790275 22.357604420795827 50 20.265047951543703 28.654333515605284 29.23785569319425 21.842762839656768 51 20.05069219525532 28.32647403676285 27.585380825691928 24.037452942289896 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1264.0 1 2095.0 2 2926.0 3 9187.0 4 15448.0 5 12111.5 6 8775.0 7 8570.0 8 8365.0 9 9023.0 10 9681.0 11 10241.0 12 10801.0 13 11310.0 14 11819.0 15 11669.5 16 11520.0 17 11573.0 18 11626.0 19 11840.0 20 12054.0 21 13437.5 22 14821.0 23 17533.5 24 20246.0 25 23719.0 26 32728.0 27 38264.0 28 45775.5 29 53287.0 30 59993.5 31 66700.0 32 76715.0 33 86730.0 34 98002.5 35 109275.0 36 113953.0 37 118631.0 38 130842.0 39 143053.0 40 162015.5 41 180978.0 42 198164.0 43 215350.0 44 226433.5 45 237517.0 46 239829.5 47 242142.0 48 244820.0 49 247498.0 50 234564.0 51 221630.0 52 204173.0 53 186716.0 54 172032.0 55 157348.0 56 143952.0 57 130556.0 58 122049.0 59 113542.0 60 106975.0 61 100408.0 62 87838.0 63 75268.0 64 65109.0 65 54950.0 66 45504.5 67 36059.0 68 29350.0 69 22641.0 70 18681.0 71 14721.0 72 11727.0 73 8733.0 74 7817.5 75 5127.5 76 3353.0 77 2955.0 78 2557.0 79 1720.5 80 884.0 81 650.5 82 417.0 83 297.0 84 177.0 85 156.5 86 136.0 87 88.5 88 41.0 89 35.5 90 30.0 91 26.0 92 22.0 93 17.0 94 12.0 95 9.0 96 6.0 97 3.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3043072.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 21.340915779256413 #Duplication Level Percentage of deduplicated Percentage of total 1 78.65779318516705 16.786293397468192 2 8.046835055175519 3.4345365840413784 3 2.7499151008562985 1.7605711970243902 4 1.36451695695782 1.1648016583121634 5 0.8403276014953147 0.8966680285248031 6 0.5837280535667833 0.7474374737494798 7 0.4534232623849752 0.6773527358439406 8 0.3566116335851263 0.6088335070594584 9 0.29689991052511955 0.5702504386846806 >10 3.8618069739117957 20.92411526798393 >50 2.0667780829445745 31.98674810220489 >100 0.7164582897736808 19.308092028342443 >500 0.0037981112175463215 0.5864003936384308 >1k 9.495278043865804E-4 0.271973873752824 >5k 1.5825463406443006E-4 0.2759253133690019 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8170 0.2684786952132582 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.286152940186759E-5 0.0 0.0 0.045447495162782875 0.0 2 3.286152940186759E-5 0.0 0.0 0.1729502292420291 0.0 3 3.286152940186759E-5 0.0 0.0 0.2673614032135947 0.0 4 3.286152940186759E-5 0.0 0.0 0.4686382708000337 0.0 5 3.286152940186759E-5 0.0 0.0 0.8734594515016404 0.0 6 3.286152940186759E-5 0.0 0.0 1.4293450828636325 0.0 7 3.286152940186759E-5 0.0 0.0 1.7000583620762177 0.0 8 3.286152940186759E-5 0.0 0.0 2.3331357260031966 0.0 9 3.286152940186759E-5 0.0 0.0 2.555969756877261 0.0 10 3.286152940186759E-5 0.0 0.0 2.937623559350551 0.0 11 3.286152940186759E-5 0.0 0.0 3.4095479830907713 0.0 12 3.286152940186759E-5 0.0 0.0 3.77815575839152 0.0 13 3.286152940186759E-5 0.0 0.0 3.9527490641036427 0.0 14 3.286152940186759E-5 0.0 0.0 4.03786042525448 0.0 15 3.286152940186759E-5 0.0 0.0 4.143707411457895 0.0 16 3.286152940186759E-5 0.0 0.0 4.35546710692353 0.0 17 3.286152940186759E-5 0.0 0.0 4.600745562379069 0.0 18 3.286152940186759E-5 0.0 0.0 4.884669176411205 0.0 19 3.286152940186759E-5 0.0 0.0 5.062548635063515 0.0 20 3.286152940186759E-5 0.0 0.0 5.253638428535375 0.0 21 3.286152940186759E-5 0.0 0.0 5.494020516110036 0.0 22 3.286152940186759E-5 0.0 0.0 5.762630657440901 0.0 23 3.286152940186759E-5 0.0 0.0 6.037353043240515 0.0 24 3.286152940186759E-5 0.0 0.0 6.247699692941869 0.0 25 3.286152940186759E-5 0.0 0.0 6.441385547236477 0.0 26 3.286152940186759E-5 0.0 0.0 6.624818604357702 0.0 27 3.286152940186759E-5 0.0 0.0 6.81534975182973 0.0 28 3.286152940186759E-5 0.0 0.0 7.009298498359552 0.0 29 3.286152940186759E-5 0.0 0.0 7.224870131235804 0.0 30 3.286152940186759E-5 0.0 0.0 7.48434476739295 0.0 31 3.286152940186759E-5 0.0 0.0 7.705469998738117 0.0 32 3.286152940186759E-5 0.0 0.0 7.933233259022462 0.0 33 3.286152940186759E-5 0.0 0.0 8.153766982838395 0.0 34 3.286152940186759E-5 0.0 0.0 8.37712679818289 0.0 35 3.286152940186759E-5 0.0 0.0 8.637784449398502 0.0 36 3.286152940186759E-5 0.0 0.0 8.87054266215193 0.0 37 3.286152940186759E-5 0.0 0.0 9.116576932783714 0.0 38 3.286152940186759E-5 0.0 0.0 9.37923913729284 0.0 39 3.286152940186759E-5 0.0 0.0 9.711929260957348 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCGTAA 55 6.184564E-11 40.909092 31 ACGGGAT 1405 0.0 40.516014 5 CGTTTTT 5830 0.0 39.55832 1 TACGGGA 1300 0.0 38.76923 4 AATGCGG 435 0.0 38.27586 2 TGCGTAG 130 0.0 38.07692 1 TAGCACG 155 0.0 37.74194 1 AGGGATC 3560 0.0 37.60534 6 GGCGATT 1440 0.0 37.5 8 CGTACGT 60 1.5643309E-10 37.499996 13 TAGGGAT 4425 0.0 37.42373 5 GGGCGAT 5165 0.0 37.420135 7 AGGGATT 5660 0.0 37.40724 6 TTAGGGA 4090 0.0 37.188263 4 AAGGGAT 5640 0.0 36.901596 5 TGGGCGA 1545 0.0 36.844658 6 CGGGATA 740 0.0 36.790543 6 TAAGGGA 4420 0.0 36.70249 4 GTAGGGA 4125 0.0 36.600002 4 TAGGGAC 3335 0.0 36.296852 5 >>END_MODULE