##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547980_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2190153 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.88547375457331 31.0 31.0 31.0 30.0 33.0 2 31.239998758077633 31.0 31.0 33.0 30.0 34.0 3 31.45719682597517 31.0 31.0 34.0 30.0 34.0 4 35.31342422196075 37.0 35.0 37.0 33.0 37.0 5 35.134956324969075 37.0 35.0 37.0 32.0 37.0 6 35.15480105727773 37.0 35.0 37.0 32.0 37.0 7 35.513232637171924 35.0 35.0 37.0 35.0 37.0 8 35.59251750905074 37.0 35.0 37.0 35.0 37.0 9 37.41745531019979 39.0 37.0 39.0 35.0 39.0 10 36.50950687006798 38.0 35.0 39.0 32.0 39.0 11 36.16869871648237 38.0 35.0 39.0 31.0 39.0 12 35.614662537274796 37.0 35.0 39.0 30.0 39.0 13 35.33071296845471 37.0 35.0 39.0 30.0 39.0 14 36.26562299528846 38.0 35.0 40.0 30.0 41.0 15 36.503308672955725 38.0 35.0 40.0 30.0 41.0 16 36.636734054652806 38.0 35.0 40.0 31.0 41.0 17 36.582170286733394 38.0 35.0 40.0 31.0 41.0 18 36.5015813963682 38.0 35.0 40.0 30.0 41.0 19 36.467577379297246 38.0 35.0 40.0 30.0 41.0 20 36.371211965556746 38.0 35.0 40.0 30.0 41.0 21 36.24647867066821 38.0 34.0 40.0 30.0 41.0 22 36.12381920349857 38.0 34.0 40.0 30.0 41.0 23 36.06478314528711 38.0 34.0 40.0 30.0 41.0 24 35.947160312544376 38.0 34.0 40.0 30.0 41.0 25 35.785984814759516 38.0 34.0 40.0 29.0 41.0 26 35.573395557296685 38.0 34.0 40.0 29.0 41.0 27 35.652435697414745 38.0 34.0 40.0 29.0 41.0 28 35.70545984686915 38.0 34.0 40.0 29.0 41.0 29 35.70832540009762 38.0 34.0 40.0 29.0 41.0 30 35.634948334659725 38.0 34.0 40.0 29.0 41.0 31 35.55404850711343 38.0 34.0 40.0 29.0 41.0 32 35.432918613448464 38.0 34.0 40.0 28.0 41.0 33 35.339262142873125 38.0 34.0 40.0 27.0 41.0 34 35.19731132939114 38.0 34.0 40.0 27.0 41.0 35 35.0742710669072 37.0 34.0 40.0 26.0 41.0 36 35.01862335645044 37.0 34.0 40.0 26.0 41.0 37 34.96386553816103 37.0 33.0 40.0 26.0 41.0 38 34.901295023680994 37.0 33.0 40.0 26.0 41.0 39 34.86941231959594 37.0 33.0 40.0 25.0 41.0 40 34.68832953679492 37.0 33.0 40.0 24.0 41.0 41 34.62907020651069 37.0 33.0 40.0 24.0 41.0 42 34.605497880741666 37.0 33.0 40.0 24.0 41.0 43 34.578668704880435 37.0 33.0 40.0 24.0 41.0 44 34.449370432111365 37.0 33.0 40.0 24.0 41.0 45 34.32070499184304 36.0 33.0 40.0 24.0 41.0 46 34.276406716791016 36.0 33.0 40.0 24.0 41.0 47 34.224970584246854 36.0 33.0 40.0 24.0 41.0 48 34.149491839154614 36.0 33.0 40.0 23.0 41.0 49 34.01611531249187 36.0 33.0 40.0 24.0 41.0 50 33.891106694372496 36.0 33.0 40.0 23.0 41.0 51 33.54990952686867 35.0 32.0 39.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 3.0 13 17.0 14 34.0 15 94.0 16 264.0 17 621.0 18 1308.0 19 2496.0 20 4256.0 21 6697.0 22 9854.0 23 14058.0 24 19820.0 25 26579.0 26 34394.0 27 41031.0 28 48755.0 29 58744.0 30 70769.0 31 85717.0 32 105702.0 33 133313.0 34 197602.0 35 223327.0 36 185015.0 37 229090.0 38 311329.0 39 379209.0 40 55.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.310662314459314 24.282047875194106 29.43109453997049 11.976195270376087 2 30.261493146825813 26.477373955152906 29.23252393782535 14.028608960195932 3 30.10862711417878 26.29304893311107 29.465840970927605 14.132482981782552 4 25.998959890016813 29.39936159711217 28.883552884204892 15.718125628666124 5 23.558308483471247 33.43177394456004 28.157302252399717 14.852615319568999 6 21.61794176023319 42.475708318094675 25.528581793144134 10.377768128528007 7 90.94588368940435 3.3181700091272166 4.361521774962754 1.3744245265056825 8 91.61675006266685 2.556031473600246 3.999172660540154 1.828045803192745 9 86.97154947622381 4.852446381599824 5.575683525306223 2.6003206168701456 10 41.45208120163294 31.21284220782749 13.840950837681204 13.494125752858363 11 34.92121326683569 26.743291450414652 22.618693762490565 15.716801520259088 12 33.02225917550052 23.91079527320694 25.414023586480035 17.652921964812503 13 25.18764670778708 30.00068944954987 26.51864961032403 18.29301423233902 14 19.637897443694573 33.108737152153296 28.217845967838777 19.035519436313354 15 18.965569985293264 26.899673219176922 36.84066820902467 17.294088586505143 16 22.387933628381212 24.961224170183545 34.69369491537806 17.957147286057186 17 22.55239702431748 24.67649520375974 27.519903860597868 25.251203911324914 18 24.091513241312366 25.970742683273723 30.324639420168364 19.613104655245547 19 27.08107607094116 27.37498247839306 26.21917281578045 19.324768634885324 20 28.230219532607997 27.830932359520087 25.538626753473388 18.40022135439853 21 26.093245540380057 26.790594081783325 28.58690694211774 18.52925343571887 22 24.605175985422022 24.733979772189432 27.838740033230554 22.822104209157988 23 22.22452038738846 28.48102392846527 27.503649288428704 21.79080639571756 24 22.233195580400093 26.77045850221423 32.10341925883717 18.89292665854851 25 21.887374991610177 27.545335873795118 29.64633064448009 20.920958490114618 26 20.77274966634751 31.539486054170645 26.161733906261343 21.5260303732205 27 20.427842255769345 30.264643611656357 29.137827357266822 20.16968677530748 28 18.342051902310022 29.208279056303372 31.86037687777977 20.589292163606835 29 19.886190599469536 27.171982961920925 32.01022942232803 20.93159701628151 30 21.620589977047267 27.44159882894026 30.840950381092096 20.096860812920376 31 25.330330803373098 27.300512795224808 26.6450334748303 20.7241229265718 32 26.19931118967488 27.243941405006865 27.410779064293685 19.145968341024577 33 25.538170164367514 27.822165848687284 26.02763368586578 20.61203030107942 34 21.176739707225934 28.678133445471616 28.6961230562431 21.449003791059347 35 20.84543865200285 27.645191911250034 29.805862878072904 21.703506558674214 36 25.87102362255057 26.96971398801819 27.198784742435798 19.96047764699544 37 21.57497672537033 30.012560766302627 27.826412127371924 20.586050380955122 38 21.93915219621643 30.450703672300524 25.77418107319443 21.83596305828862 39 21.248698150311874 28.852778778468902 28.025393659712357 21.873129411506866 40 23.876962020461583 26.507463177230083 27.29010256361085 22.32547223869748 41 19.72720627280377 26.42061992929261 28.7129711942499 25.139202603653715 42 22.22753387548724 26.720188041657362 27.381009454590615 23.671268628264784 43 21.822950268771176 27.30553527538944 27.630626718772618 23.24088773706677 44 20.854022527193305 28.18369310271931 28.16319225186551 22.79909211822188 45 20.33771156626957 30.277747718994974 26.55179797941057 22.832742735324885 46 22.137174891434526 28.982952332553936 26.852644541271776 22.027228234739766 47 20.86237810783082 27.708520820234934 28.516409584170603 22.912691487763638 48 21.903720881600506 26.797671212924396 29.39424779912636 21.904360106348737 49 22.015219941255246 25.540453109896887 30.144423700079404 22.299903248768466 50 20.563677514767235 29.237044169973515 28.559100665569943 21.640177649689313 51 20.18849824646954 29.553186466881538 26.855977641744666 23.40233764490426 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 852.0 1 1474.5 2 2097.0 3 5438.5 4 8780.0 5 7189.0 6 5598.0 7 5509.0 8 5420.0 9 5798.5 10 6177.0 11 6473.5 12 6770.0 13 6946.0 14 7122.0 15 7043.0 16 6964.0 17 7161.5 18 7359.0 19 7651.5 20 7944.0 21 9208.5 22 10473.0 23 11643.0 24 12813.0 25 15646.5 26 21050.0 27 23620.0 28 26081.0 29 28542.0 30 35873.0 31 43204.0 32 50631.0 33 58058.0 34 62573.0 35 67088.0 36 75039.0 37 82990.0 38 92817.5 39 102645.0 40 118308.0 41 133971.0 42 151415.5 43 168860.0 44 174744.0 45 180628.0 46 179598.5 47 178569.0 48 175547.0 49 172525.0 50 166148.5 51 159772.0 52 150358.5 53 140945.0 54 129578.5 55 118212.0 56 111025.5 57 103839.0 58 95325.5 59 86812.0 60 78578.0 61 70344.0 62 62571.0 63 54798.0 64 46455.5 65 38113.0 66 31911.5 67 25710.0 68 21152.5 69 16595.0 70 13428.5 71 10262.0 72 8514.5 73 6767.0 74 5637.5 75 3695.0 76 2882.0 77 2263.0 78 1644.0 79 1242.0 80 840.0 81 586.0 82 332.0 83 219.5 84 107.0 85 84.5 86 62.0 87 43.5 88 25.0 89 17.5 90 10.0 91 8.5 92 7.0 93 7.0 94 7.0 95 7.0 96 7.0 97 5.0 98 3.0 99 2.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2190153.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.978450364976936 #Duplication Level Percentage of deduplicated Percentage of total 1 79.81550036040917 15.147745119458245 2 7.239782371596487 2.747997007851579 3 2.314965725115653 1.3180338633219082 4 1.1932316487669121 0.9058275048016975 5 0.6938204710408743 0.6583818685927075 6 0.5193412116039403 0.591377484414742 7 0.38176672394097344 0.5071738574919532 8 0.287149688869595 0.43597248940241445 9 0.2539187101560648 0.4337085273692257 >10 3.862244440539945 19.33939404344001 >50 2.5029133989878267 34.71514087825353 >100 0.9314237572992706 22.41787904779959 >500 0.0034488052141362345 0.44456598090662675 >1k 4.926864591623192E-4 0.33680232689571343 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4195 0.19153912991466807 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 3009 0.1373876619578632 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.02292077311493763 0.0 2 0.0 0.0 0.0 0.102504254268994 0.0 3 0.0 0.0 0.0 0.15072006384942058 0.0 4 0.0 0.0 0.0 0.30618865439994375 0.0 5 0.0 0.0 0.0 0.553385996320805 0.0 6 0.0 0.0 0.0 0.8640948828689137 0.0 7 0.0 0.0 0.0 1.0008433200785516 0.0 8 0.0 0.0 0.0 1.3483532885602056 0.0 9 0.0 0.0 0.0 1.453597077464451 0.0 10 0.0 0.0 0.0 1.675042793813948 0.0 11 0.0 0.0 0.0 1.9932397416984111 0.0 12 0.0 0.0 0.0 2.2330403401040932 0.0 13 0.0 0.0 0.0 2.3359098656577872 0.0 14 0.0 0.0 0.0 2.381523117334725 0.0 15 0.0 0.0 0.0 2.455764505950041 0.0 16 0.0 0.0 0.0 2.6121462747123148 0.0 17 0.0 0.0 0.0 2.784326026537872 0.0 18 0.0 0.0 0.0 3.001525464202729 0.0 19 0.0 0.0 0.0 3.1192797946079565 0.0 20 0.0 0.0 0.0 3.24817489919654 0.0 21 0.0 0.0 0.0 3.422226666356186 0.0 22 0.0 0.0 0.0 3.608378044821526 0.0 23 0.0 0.0 0.0 3.8036155464937838 0.0 24 0.0 0.0 0.0 3.95127646333384 0.0 25 0.0 0.0 0.0 4.087842264901128 0.0 26 0.0 0.0 0.0 4.2166917105791235 0.0 27 0.0 0.0 0.0 4.361704410605104 0.0 28 0.0 0.0 0.0 4.501740289377044 0.0 29 0.0 0.0 0.0 4.6629619026615945 0.0 30 0.0 0.0 0.0 4.8629022721243675 0.0 31 0.0 0.0 0.0 5.044076829335667 0.0 32 0.0 0.0 0.0 5.217398053925913 0.0 33 0.0 0.0 0.0 5.391997728012609 0.0 34 0.0 0.0 0.0 5.570843680783946 0.0 35 0.0 0.0 0.0 5.776034824964284 0.0 36 0.0 0.0 0.0 5.9648344202437 0.0 37 0.0 0.0 0.0 6.162080913981809 0.0 38 0.0 0.0 0.0 6.378047561060803 0.0 39 0.0 0.0 0.0 6.717430243457877 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CACGACG 265 0.0 42.45283 26 CGCGTAA 65 0.0 41.538464 31 CGGGTAT 175 0.0 41.142857 6 CGGTCTA 275 0.0 40.909092 31 TCGCGCG 50 1.0822987E-9 40.5 1 ACGGGTA 275 0.0 40.090908 5 GGGCGAT 3455 0.0 39.725037 7 ACAACGA 485 0.0 39.43299 13 AGTACGG 195 0.0 39.23077 2 CGACGGT 290 0.0 38.793106 28 ACGGGAT 700 0.0 38.571426 5 TCGATCA 170 0.0 38.38235 17 TCACGAC 300 0.0 38.25 25 GCGATAC 65 9.094947E-12 38.076927 9 GCGATCT 195 0.0 38.076923 9 TGGGCGA 1125 0.0 38.0 6 AGGGCGA 1815 0.0 37.933884 6 TATAGCG 95 0.0 37.894737 1 GGCACCG 775 0.0 37.741936 8 TACGGGA 830 0.0 37.68072 4 >>END_MODULE