##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547979_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2636657 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.86234197318802 31.0 31.0 31.0 30.0 33.0 2 31.17423464637228 31.0 31.0 33.0 30.0 34.0 3 31.202876976413695 31.0 31.0 34.0 28.0 34.0 4 35.18637615738414 35.0 35.0 37.0 33.0 37.0 5 35.082466547601754 35.0 35.0 37.0 32.0 37.0 6 35.141041857169895 37.0 35.0 37.0 32.0 37.0 7 35.52736021408928 35.0 35.0 37.0 35.0 37.0 8 35.62064424762114 37.0 35.0 37.0 35.0 37.0 9 37.452678903626826 39.0 37.0 39.0 35.0 39.0 10 36.61379011376906 39.0 37.0 39.0 32.0 39.0 11 36.19450956267728 38.0 35.0 39.0 31.0 39.0 12 35.91482130591882 37.0 35.0 39.0 31.0 39.0 13 35.82520365751025 38.0 35.0 39.0 30.0 39.0 14 36.83388434673149 39.0 35.0 40.0 31.0 41.0 15 36.96763325680966 39.0 35.0 41.0 31.0 41.0 16 37.03483729586366 39.0 35.0 41.0 31.0 41.0 17 36.96596258064663 39.0 35.0 41.0 31.0 41.0 18 36.830093940925956 38.0 35.0 40.0 31.0 41.0 19 36.73436855836766 38.0 35.0 40.0 31.0 41.0 20 36.552792797849705 38.0 35.0 40.0 30.0 41.0 21 36.447166620459164 38.0 35.0 40.0 30.0 41.0 22 36.35669372239165 38.0 35.0 40.0 30.0 41.0 23 36.26596861101008 38.0 35.0 40.0 30.0 41.0 24 36.13509303637144 38.0 34.0 40.0 30.0 41.0 25 35.963916049755426 38.0 34.0 40.0 30.0 41.0 26 35.74537150641893 38.0 34.0 40.0 29.0 41.0 27 35.81505027009581 38.0 34.0 40.0 29.0 41.0 28 35.82017228634593 38.0 34.0 40.0 29.0 41.0 29 35.77533596520139 38.0 34.0 40.0 29.0 41.0 30 35.66637753792018 38.0 34.0 40.0 29.0 41.0 31 35.559079925830325 38.0 34.0 40.0 28.0 41.0 32 35.38074349450839 38.0 34.0 40.0 27.0 41.0 33 35.15687933622007 38.0 34.0 40.0 26.0 41.0 34 34.87686566739625 38.0 33.0 40.0 24.0 41.0 35 34.66258978699163 38.0 33.0 40.0 24.0 41.0 36 34.56686364589706 38.0 33.0 40.0 23.0 41.0 37 34.50898163849147 38.0 33.0 40.0 23.0 41.0 38 34.406847762147294 38.0 33.0 40.0 23.0 41.0 39 34.35736009651615 38.0 33.0 40.0 23.0 41.0 40 34.21509206544499 37.0 33.0 40.0 22.0 41.0 41 34.1126202611868 37.0 33.0 40.0 22.0 41.0 42 34.068138935022645 37.0 33.0 40.0 22.0 41.0 43 34.0275932743622 37.0 33.0 40.0 22.0 41.0 44 33.87702192587052 37.0 33.0 40.0 21.0 41.0 45 33.76014058711467 37.0 33.0 40.0 21.0 41.0 46 33.709756710865314 37.0 32.0 40.0 21.0 41.0 47 33.66346134518066 37.0 32.0 40.0 20.0 41.0 48 33.56221457701931 36.0 32.0 40.0 20.0 41.0 49 33.42173441596689 36.0 32.0 40.0 20.0 41.0 50 33.3349722773952 36.0 32.0 40.0 20.0 41.0 51 33.01448538812595 35.0 31.0 39.0 19.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 4.0 12 5.0 13 16.0 14 44.0 15 132.0 16 304.0 17 807.0 18 1720.0 19 3267.0 20 5455.0 21 8811.0 22 13224.0 23 19142.0 24 28492.0 25 41283.0 26 54474.0 27 61758.0 28 65823.0 29 71936.0 30 83340.0 31 98664.0 32 118780.0 33 146875.0 34 202719.0 35 231260.0 36 236637.0 37 288797.0 38 388631.0 39 464230.0 40 27.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.53939135807198 24.037370048512187 28.928184439614252 16.495054153801576 2 32.71206683311481 25.34296269859902 28.811900827449303 13.133069640836863 3 27.904729359943293 25.324113071969546 33.446026540426 13.325131027661163 4 24.843125214997627 28.000684199727154 33.14985604877692 14.006334536498299 5 22.398590336171903 32.08426427859217 31.893264842563894 13.62388054267203 6 20.99518443240816 40.95079488913424 28.229838010784107 9.824182667673497 7 88.18977970968541 2.4942948589824163 8.145276385969051 1.1706490453631246 8 88.83119799048568 2.0587433253547958 7.865073083074514 1.2449856010850102 9 84.07961293410557 4.932837301173418 9.036253103835652 1.9512966608853561 10 39.1699413310112 36.79962922746493 14.498131535501205 9.532297906022665 11 26.38663277020864 25.60905722663206 29.68819986824225 18.316110134917054 12 27.076256031785707 22.853067350057287 30.966940333915254 19.10373628424175 13 24.583516172183185 24.445386715071397 31.3047923943084 19.666304718437022 14 19.542852938398887 27.645992633854156 32.29767846177944 20.513475965967512 15 19.23003257534067 27.497698790551823 34.83831988764561 18.433948746461905 16 23.575193891355607 26.114052756957012 32.28155956576832 18.029193785919063 17 23.17233527151996 26.16787090622709 30.224826361563146 20.434967460689805 18 22.639842800940738 26.24474855849661 32.50176264868733 18.61364599187532 19 24.66896528444921 27.576169369015386 29.062179873984366 18.692685472551037 20 25.36799439593394 28.075096609077328 29.12623826307328 17.430670731915452 21 24.876538738258333 26.2555577005276 31.24483010114702 17.623073460067047 22 24.25120142665504 23.761300768359327 31.50182219378554 20.48567561120009 23 21.97206538431051 26.678024483275603 31.10025308563078 20.249657046783103 24 21.325716617671546 27.07022566833684 32.61679467598554 18.98726303800608 25 22.398173141216322 28.270381775103854 29.95691134645121 19.37453373722862 26 21.200520204182798 29.43697265135359 28.957767354646435 20.40473978981718 27 19.654206064725145 29.24828675098809 31.196738900812658 19.90076828347411 28 19.581955483781165 28.212846798047682 32.11210256017373 20.093095157997418 29 20.657294445200876 26.982311313151463 31.927892023877202 20.432502217770455 30 21.39227817649395 27.210061832085096 31.569142288890816 19.828517702530135 31 22.86330758987612 27.40034065864464 29.886481252586133 19.849870498893104 32 23.565332919678212 27.60385594334037 29.44869203692403 19.38211910005738 33 23.248454387506605 27.71869833656786 29.559779675551273 19.47306760037426 34 21.538220557319363 27.714222972498888 30.534915994003015 20.212640476178738 35 21.449585592665258 28.62025663558059 29.747669112819757 20.1824886589344 36 23.107177004820876 28.990043073482823 28.24007825060294 19.66270167109336 37 22.238918448626425 29.561107114046308 28.435932318841623 19.76404211848564 38 21.91126870123797 29.50433067327301 28.40263257602335 20.181768049465667 39 21.416665117988423 29.237363828514667 28.151026090993252 21.194944962503655 40 23.00769497132164 28.131759269408196 28.365198810463397 20.495346948806766 41 20.586029961424636 28.302202372170516 28.945630774120414 22.166136892284435 42 21.171582044991062 28.559080684366606 28.512999605181864 21.756337665460467 43 21.385640984018778 28.171506570630918 28.938841874388665 21.504010570961636 44 21.379231352428473 28.496122172887866 28.871787266982395 21.252859207701267 45 20.877876796261326 29.073406210970937 28.08522306845373 21.963493924314008 46 21.299016140514297 29.222420663742003 28.1900148559331 21.2885483398106 47 20.74145404578601 29.069310115043407 29.255834187002712 20.933401652167877 48 21.012516986471887 28.48967461448342 29.681448895324646 20.816359503720054 49 21.554984209170932 28.029205163963304 29.283293200442834 21.13251742642293 50 20.14505489337445 28.822709969480293 29.871424307371036 21.160810829774217 51 20.063436389336953 28.85532702964398 29.403862542606035 21.677374038413035 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1044.0 1 1869.0 2 2694.0 3 23238.5 4 43783.0 5 32920.0 6 22057.0 7 20432.0 8 18807.0 9 19489.0 10 20171.0 11 20719.5 12 21268.0 13 21005.5 14 20743.0 15 19657.0 16 18571.0 17 17839.0 18 17107.0 19 16350.0 20 15593.0 21 15731.0 22 15869.0 23 17066.0 24 18263.0 25 21047.5 26 27185.0 27 30538.0 28 36184.0 29 41830.0 30 49496.0 31 57162.0 32 64417.5 33 71673.0 34 80831.5 35 89990.0 36 96156.5 37 102323.0 38 111039.0 39 119755.0 40 132177.0 41 144599.0 42 152714.5 43 160830.0 44 166357.0 45 171884.0 46 177668.5 47 183453.0 48 185948.0 49 188443.0 50 183165.0 51 177887.0 52 168315.5 53 158744.0 54 151119.5 55 143495.0 56 135066.0 57 126637.0 58 119535.0 59 112433.0 60 101043.5 61 89654.0 62 78402.5 63 67151.0 64 58346.0 65 49541.0 66 42024.0 67 34507.0 68 28219.5 69 21932.0 70 17869.5 71 13807.0 72 11178.0 73 8549.0 74 6594.0 75 3523.5 76 2408.0 77 1907.0 78 1406.0 79 1110.5 80 815.0 81 636.5 82 458.0 83 299.5 84 141.0 85 104.0 86 67.0 87 50.0 88 33.0 89 29.5 90 26.0 91 20.0 92 14.0 93 15.0 94 16.0 95 15.5 96 15.0 97 7.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2636657.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 24.120338364385614 #Duplication Level Percentage of deduplicated Percentage of total 1 73.01829019385455 17.612258662646717 2 6.72765388574657 3.245465762453619 3 3.0301466501904626 2.192644874889107 4 1.8331607135354038 1.7686582674709004 5 1.3898363981913866 1.676166209775761 6 1.0580345112308822 1.5312090247251735 7 0.8491102815023577 1.433657910896091 8 0.7784778102214994 1.5021718553366827 9 0.7008772016114223 1.52148557292761 >10 9.945436622954077 55.55602905402497 >50 0.6395644459513395 9.368058418562942 >100 0.02682645289987208 1.080902497590504 >500 0.0019386240825950691 0.2874197857634907 >1k 4.846560206487669E-4 0.20126399043769372 >5k 0.0 0.0 >10k+ 1.6155200688292232E-4 1.022608112498818 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 26243 0.9953133835762483 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.016649871409136645 0.0 2 0.0 0.0 0.0 0.051428759979018884 0.0 3 0.0 0.0 0.0 0.08996240314913923 0.0 4 0.0 0.0 0.0 0.14419774737480073 0.0 5 0.0 0.0 0.0 0.28558891050295887 0.0 6 0.0 0.0 0.0 0.5704192847230414 0.0 7 0.0 0.0 0.0 0.753871284736695 0.0 8 0.0 0.0 0.0 1.0814831053110057 0.0 9 0.0 0.0 0.0 1.285718999475472 0.0 10 0.0 0.0 0.0 1.5314089014991332 0.0 11 0.0 0.0 0.0 1.7504362531796893 0.0 12 0.0 0.0 0.0 1.9124216763879411 0.0 13 0.0 0.0 0.0 2.019033950946217 0.0 14 0.0 0.0 0.0 2.097770017108786 0.0 15 0.0 0.0 0.0 2.1625110888522854 0.0 16 0.0 0.0 0.0 2.2489083714719054 0.0 17 0.0 0.0 0.0 2.3541552807210038 0.0 18 0.0 0.0 0.0 2.47745535350256 0.0 19 0.0 0.0 0.0 2.5713621453226567 0.0 20 0.0 0.0 0.0 2.665117229886178 0.0 21 0.0 0.0 0.0 2.779883769485375 0.0 22 0.0 0.0 0.0 2.9161168858899735 0.0 23 0.0 0.0 0.0 3.0562564641513856 0.0 24 0.0 0.0 0.0 3.1729193444577737 0.0 25 0.0 0.0 0.0 3.2807452770686516 0.0 26 0.0 0.0 0.0 3.3900503554311388 0.0 27 0.0 0.0 0.0 3.5159673783886185 0.0 28 0.0 0.0 0.0 3.6371056227639773 0.0 29 0.0 0.0 0.0 3.7816447114660723 0.0 30 0.0 0.0 0.0 3.9576251290933935 0.0 31 0.0 0.0 0.0 4.10952201973939 0.0 32 0.0 0.0 0.0 4.256450497732545 0.0 33 0.0 0.0 0.0 4.399624221125463 0.0 34 0.0 0.0 0.0 4.563923179996488 0.0 35 0.0 0.0 0.0 4.741724084702713 0.0 36 0.0 0.0 0.0 4.901244264991616 0.0 37 0.0 0.0 0.0 5.080903583590888 0.0 38 0.0 0.0 0.0 5.282674234836007 0.0 39 0.0 0.0 0.0 5.604331545589737 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 14980 0.0 42.416553 1 TACGGGA 1055 0.0 40.30806 4 AGGGCGA 2245 0.0 38.48552 6 GGGCGAT 3990 0.0 38.458645 7 ACGGGAT 1365 0.0 38.406593 5 GACCGAT 1330 0.0 37.894733 9 TTAGGGA 4265 0.0 37.614304 4 TAGGGAC 3295 0.0 37.556904 5 TAGGGAT 4140 0.0 37.336952 5 AGGGATT 4660 0.0 37.081547 6 TAAGGGA 3885 0.0 37.06564 4 GTAGGGA 4240 0.0 37.040096 4 AAGGGAT 4605 0.0 36.98697 5 TCGATAG 140 0.0 36.964283 1 CTATGCG 55 2.752131E-9 36.81818 1 TGTAGCG 185 0.0 36.48649 1 CGGTTTT 1340 0.0 36.43657 1 TGAGGGA 4885 0.0 36.34084 4 GAGGGAT 4435 0.0 36.32469 5 AAGGGAC 3610 0.0 36.087257 5 >>END_MODULE