##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547976_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2288258 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.967656619139973 31.0 31.0 33.0 30.0 33.0 2 31.33366167626203 31.0 31.0 33.0 30.0 34.0 3 31.548511575180772 31.0 31.0 34.0 30.0 34.0 4 35.426538441032434 37.0 35.0 37.0 33.0 37.0 5 35.25817062586474 37.0 35.0 37.0 33.0 37.0 6 35.27810544090745 37.0 35.0 37.0 32.0 37.0 7 35.568760603043884 36.0 35.0 37.0 35.0 37.0 8 35.63879772298404 37.0 35.0 37.0 35.0 37.0 9 37.46783623175359 39.0 37.0 39.0 35.0 39.0 10 36.68416498489244 39.0 37.0 39.0 32.0 39.0 11 36.31781556100754 38.0 35.0 39.0 32.0 39.0 12 35.75790448454676 37.0 35.0 39.0 31.0 39.0 13 35.50695376133286 37.0 35.0 39.0 30.0 39.0 14 36.44494545632529 38.0 35.0 40.0 30.0 41.0 15 36.6762629039208 38.0 35.0 40.0 31.0 41.0 16 36.81310936091997 38.0 35.0 40.0 31.0 41.0 17 36.76319671995029 38.0 35.0 40.0 31.0 41.0 18 36.6810844756142 38.0 35.0 40.0 31.0 41.0 19 36.6184647884985 38.0 35.0 40.0 31.0 41.0 20 36.51095549540305 38.0 35.0 40.0 30.0 41.0 21 36.414030236101 38.0 35.0 40.0 30.0 41.0 22 36.29330914608405 38.0 35.0 40.0 30.0 41.0 23 36.19811664593765 38.0 34.0 40.0 30.0 41.0 24 36.09465147723727 38.0 34.0 40.0 30.0 41.0 25 35.91357180877331 38.0 34.0 40.0 30.0 41.0 26 35.66982132259562 38.0 34.0 40.0 29.0 41.0 27 35.77220182339579 38.0 34.0 40.0 29.0 41.0 28 35.80324115549907 38.0 34.0 40.0 29.0 41.0 29 35.7924351187672 38.0 34.0 40.0 29.0 41.0 30 35.73168453906858 38.0 34.0 40.0 29.0 41.0 31 35.61951886544262 38.0 34.0 40.0 29.0 41.0 32 35.51391451488425 38.0 34.0 40.0 29.0 41.0 33 35.4139965860493 38.0 34.0 40.0 28.0 41.0 34 35.28007680952061 38.0 34.0 40.0 27.0 41.0 35 35.12494264195733 38.0 34.0 40.0 26.0 41.0 36 35.048188185073535 37.0 34.0 40.0 26.0 41.0 37 35.01627307759877 37.0 33.0 40.0 26.0 41.0 38 34.91503711557001 37.0 33.0 40.0 26.0 41.0 39 34.85329713694872 37.0 33.0 40.0 25.0 41.0 40 34.64695982708243 37.0 33.0 40.0 24.0 41.0 41 34.56708159656822 37.0 33.0 40.0 24.0 41.0 42 34.520006922296346 37.0 33.0 40.0 24.0 41.0 43 34.47889748446198 37.0 33.0 40.0 24.0 41.0 44 34.32064959458243 36.0 33.0 40.0 24.0 41.0 45 34.1889459143156 36.0 33.0 40.0 23.0 41.0 46 34.12941897286058 36.0 33.0 40.0 23.0 41.0 47 34.05815209648562 36.0 33.0 40.0 23.0 41.0 48 33.95284141910571 36.0 33.0 40.0 23.0 41.0 49 33.80809462918954 36.0 33.0 40.0 23.0 41.0 50 33.67764648916337 35.0 32.0 39.0 23.0 41.0 51 33.33988300270337 35.0 32.0 39.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 1.0 11 2.0 12 3.0 13 9.0 14 35.0 15 97.0 16 270.0 17 646.0 18 1339.0 19 2510.0 20 4164.0 21 6660.0 22 9775.0 23 14194.0 24 20042.0 25 26940.0 26 35041.0 27 41924.0 28 48949.0 29 58980.0 30 71055.0 31 87646.0 32 108628.0 33 138466.0 34 207253.0 35 233180.0 36 202737.0 37 251172.0 38 333072.0 39 383424.0 40 43.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.29663875314759 24.700448987832665 29.850742355101566 12.152169903918177 2 30.03114159329936 26.235503164415903 30.125929855811712 13.607425386473029 3 29.663132391539765 26.25980112382432 29.870757580657425 14.206308903978485 4 26.528695627853153 28.95141194742901 29.312166722458745 15.207725702259097 5 23.8185991264971 33.590748945267535 28.060909215656626 14.529742712578738 6 22.68808849351778 41.95912349044557 25.047481533987863 10.30530648204879 7 91.32077763958435 3.1476345761710434 4.245325483402658 1.2862623008419505 8 91.62384661170199 2.6691920229274846 4.127375496993783 1.5795858683767303 9 86.31836969432642 5.469662948845803 5.746817011018862 2.4651503458089077 10 43.358834537014616 33.86807781290396 11.699336351058315 11.0737512990231 11 36.74729860007045 23.97893943777319 22.995309095390468 16.278452866765896 12 34.365661564386535 21.55753415917261 26.223310483345845 17.85349379309501 13 26.621429926170915 27.18535235100238 27.38873850763332 18.804479215193393 14 20.689974644467537 30.6434851314843 28.973743345374515 19.692796878673647 15 19.77263927406787 25.63176879530193 36.30355493130582 18.292036999324377 16 23.998080636012197 23.77751984260516 33.77682936102485 18.44757016035779 17 24.362200416211806 23.43699879996049 27.044633952989567 25.156166830838135 18 25.138861089964504 25.06614201720261 29.673489615244435 20.121507277588453 19 28.252889315802676 25.46513548734452 25.712791127573905 20.5691840692789 20 29.104454130609398 26.346111321363235 25.86238090285274 18.687053645174625 21 27.0377728385523 25.316987857138486 28.514747899930864 19.130491404378354 22 26.33855098507249 23.393166330020478 27.84297050420014 22.425312180706896 23 24.056640466241134 26.211685920031748 27.5339581463279 22.197715467399217 24 23.749725773929338 24.969693102788234 31.176641794762656 20.103939328519775 25 23.823493679471458 25.66257825822088 28.878692874667106 21.635235187640557 26 22.037637364318186 29.589888902387756 26.080101107480015 22.292372625814046 27 21.588168816628194 29.152700438499508 28.477295829403854 20.781834915468448 28 20.338266052167196 27.68800546092268 30.963248025353785 21.010480461556348 29 21.589261350774258 25.956120332584874 30.800810048517256 21.653808268123612 30 23.227319646648237 26.503436238396194 29.124207147970203 21.145036966985366 31 26.092993010403546 26.244680451242825 26.527471989609563 21.134854548744066 32 27.545713813739535 25.977796210042747 26.622828369877872 19.853661606339845 33 26.612645951636573 26.005939889645312 26.293888189181462 21.087525969536653 34 22.80389711300037 26.448896933824766 28.58445157844963 22.16275437472523 35 22.8107145260718 26.551420338091248 28.976015816398327 21.66184931943863 36 26.755112404283082 26.364859207309664 26.512613525223117 20.367414863184134 37 23.693263609260846 28.94520635347937 26.96667071632657 20.394859320933218 38 23.751211620367982 28.102338110475305 26.06974388377534 22.07670638538137 39 23.09162690570731 27.794986404505085 27.18994099441584 21.92344569537176 40 24.764558891523595 25.734292199568404 27.486848073949705 22.014300834958295 41 21.17269993156366 25.112989881385754 28.664556182038915 25.04975400501167 42 22.806956208609343 26.01323801774101 27.260999415275727 23.918806358373924 43 22.79952697641612 25.621236766133887 27.794418286749135 23.784817970700857 44 22.488504355715133 26.64419833777485 28.034863201614503 22.832434104895512 45 21.90806281459521 28.630818727608514 25.824404415935614 23.636714041860664 46 22.63105821109333 28.445131624143784 27.080469072980407 21.843341091782484 47 22.80446523075632 26.69196393064069 27.990637419381905 22.512933419221085 48 22.913063124874906 25.765582377511624 29.407872713653795 21.913481783959675 49 23.338714428180737 24.832383411311138 29.29822598675499 22.530676173753132 50 21.942674296342457 27.81543864371937 27.857916371318268 22.383970688619904 51 21.478696895192762 28.575449097086082 26.774952824375575 23.170901183345585 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1031.0 1 1750.5 2 2470.0 3 6632.0 4 10794.0 5 8558.0 6 6322.0 7 6106.5 8 5891.0 9 6277.0 10 6663.0 11 7009.0 12 7355.0 13 7568.5 14 7782.0 15 7832.0 16 7882.0 17 7530.5 18 7179.0 19 7339.0 20 7499.0 21 7729.5 22 7960.0 23 9706.5 24 11453.0 25 14185.5 26 19631.0 27 22344.0 28 26969.0 29 31594.0 30 36683.5 31 41773.0 32 48333.5 33 54894.0 34 61720.5 35 68547.0 36 71968.5 37 75390.0 38 84929.5 39 94469.0 40 110134.0 41 125799.0 42 138574.5 43 151350.0 44 155840.5 45 160331.0 46 163106.5 47 165882.0 48 166021.0 49 166160.0 50 163583.0 51 161006.0 52 152150.0 53 143294.0 54 135954.5 55 128615.0 56 124114.0 57 119613.0 58 115418.5 59 111224.0 60 103265.5 61 95307.0 62 87979.0 63 80651.0 64 70498.0 65 60345.0 66 51403.0 67 42461.0 68 35479.0 69 28497.0 70 23967.0 71 19437.0 72 16751.5 73 14066.0 74 10885.0 75 6379.5 76 5055.0 77 3681.5 78 2308.0 79 1894.0 80 1480.0 81 1091.0 82 702.0 83 575.0 84 448.0 85 312.0 86 176.0 87 126.5 88 77.0 89 59.0 90 41.0 91 25.5 92 10.0 93 6.5 94 3.0 95 3.0 96 3.0 97 3.0 98 3.0 99 1.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2288258.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.28053230916766 #Duplication Level Percentage of deduplicated Percentage of total 1 78.77307088789442 15.18786738346403 2 6.758464466491869 2.6061358501311616 3 2.200775534664511 1.2729637140397452 4 1.1627321735457836 0.896723809558329 5 0.7231047194733389 0.6970921953358664 6 0.5614284946860164 0.6494784138648663 7 0.41801750562973605 0.564172001616426 8 0.34893943151721957 0.5382190386648279 9 0.29207865952285167 0.506828882857385 >10 5.580171305354148 28.92527972329454 >50 2.7622281792389822 37.532712653464586 >100 0.4159743357515444 9.945011232805752 >500 0.0020868273896984713 0.24784848033014237 >1k 6.956091298994905E-4 0.19232398311332474 >5k 2.3186970996649683E-4 0.23734263745900536 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5309 0.232010551257769 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.02359873755494354 0.0 2 0.0 0.0 0.0 0.09155436144001244 0.0 3 0.0 0.0 0.0 0.1377030037696798 0.0 4 0.0 0.0 0.0 0.23410821681820843 0.0 5 0.0 0.0 0.0 0.40873887472479065 0.0 6 0.0 0.0 0.0 0.6399628013973949 0.0 7 0.0 0.0 0.0 0.7470311477114906 0.0 8 0.0 0.0 0.0 1.008277912717884 0.0 9 0.0 0.0 0.0 1.0988271427435192 0.0 10 0.0 0.0 0.0 1.2755117648446985 0.0 11 0.0 0.0 0.0 1.5187972684898294 0.0 12 0.0 0.0 0.0 1.7089856126363374 0.0 13 0.0 0.0 0.0 1.7955580183703062 0.0 14 4.370136584248804E-5 0.0 0.0 1.838166850066732 0.0 15 4.370136584248804E-5 0.0 0.0 1.8987806444902628 0.0 16 4.370136584248804E-5 0.0 0.0 2.021362975678442 0.0 17 4.370136584248804E-5 0.0 0.0 2.1622561791546233 0.0 18 4.370136584248804E-5 0.0 0.0 2.3200181098460053 0.0 19 4.370136584248804E-5 0.0 0.0 2.4226289168441673 0.0 20 4.370136584248804E-5 0.0 0.0 2.536165065302951 0.0 21 4.370136584248804E-5 0.0 0.0 2.6723385212681436 0.0 22 4.370136584248804E-5 0.0 0.0 2.8302752574228953 0.0 23 4.370136584248804E-5 0.0 0.0 2.9894793331870795 0.0 24 4.370136584248804E-5 0.0 0.0 3.114334135399068 0.0 25 4.370136584248804E-5 0.0 0.0 3.233158149124793 0.0 26 4.370136584248804E-5 0.0 0.0 3.344684034754822 0.0 27 4.370136584248804E-5 0.0 0.0 3.475220014526334 0.0 28 4.370136584248804E-5 0.0 0.0 3.5985015675679928 0.0 29 4.370136584248804E-5 0.0 0.0 3.7367289877277825 0.0 30 4.370136584248804E-5 0.0 0.0 3.907645029537753 0.0 31 4.370136584248804E-5 0.0 0.0 4.059113963547817 0.0 32 4.370136584248804E-5 0.0 0.0 4.201667818926013 0.0 33 4.370136584248804E-5 0.0 0.0 4.345183104352744 0.0 34 4.370136584248804E-5 0.0 0.0 4.4950350878266345 0.0 35 4.370136584248804E-5 0.0 0.0 4.6751284164635285 0.0 36 4.370136584248804E-5 0.0 0.0 4.836823470080734 0.0 37 4.370136584248804E-5 0.0 0.0 5.003893791696566 0.0 38 4.370136584248804E-5 0.0 0.0 5.187745437795913 0.0 39 4.370136584248804E-5 0.0 0.0 5.488192327963018 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAATCGC 30 2.1664491E-6 44.999996 41 GGCGATA 860 0.0 40.02907 8 TACGGGT 175 0.0 39.857143 4 CGTAAGG 325 0.0 39.461536 2 GGGCGAT 3660 0.0 38.729507 7 ATCGTAG 35 6.2510044E-6 38.571426 1 TAAGGGA 2980 0.0 37.676174 4 ACGGGAT 845 0.0 37.544376 5 CATTACG 30 1.1402756E-4 37.499996 44 TACGATA 30 1.1402756E-4 37.499996 42 CGCGTAA 60 1.5643309E-10 37.499996 31 TACGGGA 855 0.0 37.36842 4 CTCACGA 250 0.0 36.9 24 AAGGGAT 3870 0.0 36.511627 5 AGGGCGA 1875 0.0 36.48 6 TAGGGAC 2080 0.0 36.454327 5 ATAGGGT 550 0.0 36.409092 4 ATAGGGC 915 0.0 36.393444 4 AGGGATG 4085 0.0 36.24235 6 AGGGACC 2045 0.0 36.198044 6 >>END_MODULE