##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547975_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2074194 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.921901230068162 31.0 31.0 31.0 30.0 33.0 2 31.274054403782866 31.0 31.0 33.0 30.0 34.0 3 31.48104613165403 31.0 31.0 34.0 30.0 34.0 4 35.344902164406996 37.0 35.0 37.0 33.0 37.0 5 35.1750757161577 37.0 35.0 37.0 32.0 37.0 6 35.203814590149236 37.0 35.0 37.0 32.0 37.0 7 35.54543258730861 35.0 35.0 37.0 35.0 37.0 8 35.618194826520565 37.0 35.0 37.0 35.0 37.0 9 37.43533343554171 39.0 37.0 39.0 35.0 39.0 10 36.60459050599896 39.0 35.0 39.0 32.0 39.0 11 36.23835475370192 38.0 35.0 39.0 31.0 39.0 12 35.6122947033884 37.0 35.0 39.0 30.0 39.0 13 35.33101194970191 37.0 35.0 39.0 30.0 39.0 14 36.24476013333372 38.0 35.0 40.0 30.0 41.0 15 36.48210726672625 38.0 35.0 40.0 30.0 41.0 16 36.609660427134585 38.0 35.0 40.0 31.0 41.0 17 36.53088524988502 38.0 35.0 40.0 31.0 41.0 18 36.45809408377423 38.0 35.0 40.0 30.0 41.0 19 36.4233017740867 38.0 35.0 40.0 30.0 41.0 20 36.31505828288 38.0 34.0 40.0 30.0 41.0 21 36.18074876313402 38.0 34.0 40.0 30.0 41.0 22 36.06755346896192 38.0 34.0 40.0 30.0 41.0 23 35.985736628299954 38.0 34.0 40.0 30.0 41.0 24 35.89301193620269 38.0 34.0 40.0 30.0 41.0 25 35.732795967975996 37.0 34.0 40.0 29.0 41.0 26 35.46094193696443 37.0 34.0 40.0 29.0 41.0 27 35.580002159875114 37.0 34.0 40.0 29.0 41.0 28 35.609868700806196 37.0 34.0 40.0 29.0 41.0 29 35.62581465378841 37.0 34.0 40.0 29.0 41.0 30 35.52500151866219 37.0 34.0 40.0 29.0 41.0 31 35.43645290652658 37.0 34.0 40.0 29.0 41.0 32 35.33497975599197 37.0 34.0 40.0 28.0 41.0 33 35.21625267453285 37.0 34.0 40.0 27.0 41.0 34 35.077047277159224 37.0 34.0 40.0 26.0 41.0 35 34.95687818979324 37.0 33.0 40.0 26.0 41.0 36 34.88964291671849 37.0 33.0 40.0 25.0 41.0 37 34.83590011348986 37.0 33.0 40.0 25.0 41.0 38 34.759724500215505 37.0 33.0 40.0 25.0 41.0 39 34.716203980919815 37.0 33.0 40.0 25.0 41.0 40 34.496469471997315 37.0 33.0 40.0 24.0 41.0 41 34.43825119540409 37.0 33.0 40.0 24.0 41.0 42 34.403247719355086 36.0 33.0 40.0 24.0 41.0 43 34.366130169116296 36.0 33.0 40.0 24.0 41.0 44 34.22332819398764 36.0 33.0 40.0 24.0 41.0 45 34.069714790419795 36.0 33.0 40.0 23.0 41.0 46 34.01103802248006 36.0 33.0 40.0 23.0 41.0 47 33.94582811443867 35.0 33.0 40.0 23.0 41.0 48 33.8651625643503 35.0 33.0 40.0 23.0 41.0 49 33.725808675562654 35.0 32.0 39.0 23.0 41.0 50 33.600012824258485 35.0 32.0 39.0 23.0 41.0 51 33.246127411418605 35.0 32.0 39.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 5.0 13 14.0 14 40.0 15 105.0 16 277.0 17 654.0 18 1307.0 19 2459.0 20 4138.0 21 6519.0 22 9340.0 23 13680.0 24 19061.0 25 25457.0 26 32298.0 27 39769.0 28 47026.0 29 55915.0 30 68587.0 31 83462.0 32 101911.0 33 130041.0 34 195428.0 35 218440.0 36 178558.0 37 218967.0 38 289002.0 39 331691.0 40 42.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.383816557178356 23.934791056188573 29.03161420773563 11.649778178897442 2 30.352271773999924 26.566271043113616 29.359307760026304 13.722149422860157 3 30.210963873196047 26.611975543271267 29.782411866970975 13.394648716561711 4 26.485516783868817 28.955873944288722 28.949365392051078 15.609243879791379 5 24.040374236932514 33.41138774868696 27.79166268921808 14.75657532516245 6 22.3134383765453 43.00836855183267 24.409288620061574 10.268904451560463 7 91.2934855659596 3.3275575958661534 4.220964866352906 1.1579919718213436 8 91.66138750762947 2.7464644097900193 3.9292370916124533 1.662910990968058 9 86.63707444915953 5.462989479286894 5.579082766607173 2.3208533049464033 10 43.47592365998552 34.578877385625454 11.053835851419876 10.891363102969153 11 37.47127800003278 24.541484547732757 21.644021726029482 16.343215726204974 12 34.73093645049595 22.30789405426879 25.39882961767318 17.56233987756208 13 25.651023964007223 30.14920494418555 26.143745474145618 18.056025617661607 14 20.480822912418027 32.640775163750355 28.187238030772434 18.691163893059183 15 20.014039188234083 26.200152926871834 36.37653951366169 17.409268371232393 16 24.106857892752558 23.786878180150943 34.34616048450627 17.760103442590232 17 23.61755939897618 24.096878112654842 26.396373723962174 25.8891887644068 18 25.098713042270877 25.20371768503814 29.50249590925439 20.19507336343659 19 27.931379610586088 26.72884021456045 25.18202251091267 20.15775766394079 20 30.391082029935486 26.57142967340567 24.56877225563279 18.468716041026056 21 27.10199720951849 26.593414116519476 27.577121522866232 18.7274671510958 22 26.426120218263094 23.691708682987223 26.934606888265993 22.947564210483687 23 23.70718457386339 27.473032898562046 26.720162144910265 22.099620382664302 24 23.274872070789907 25.586468768109444 31.39175988359816 19.74689927750249 25 23.19141796765394 26.297347306953927 29.09727826808871 21.413956457303414 26 21.723763543815092 30.042030784005743 26.252703459753523 21.981502212425646 27 21.35740437008303 30.175480210626393 27.110289587184226 21.356825832106352 28 19.114846537980537 29.186855231477864 31.164587304755486 20.533710925786114 29 21.397419913470003 27.115978543954906 29.47135128150983 22.015250261065262 30 23.05001364385395 27.421591230135654 29.408965603024594 20.119429522985797 31 27.012709515117677 26.593221270527252 25.81291817448127 20.581151039873802 32 27.528138640840734 25.82217478210814 26.680098390025236 19.9695881870259 33 26.59813884332902 26.499980233285797 25.92071908413581 20.981161839249367 34 21.907690408900997 27.47592558844544 29.27561259940006 21.340771403253505 35 21.86434827214812 27.98176062605523 28.817121252881844 21.33676984891481 36 26.94492414885011 27.85771244155561 25.861804633510655 19.335558776083626 37 23.358856500404496 29.388572139346657 26.78886352964091 20.463707830607937 38 22.968295154648022 30.08662641970809 25.674069060078274 21.271009365565615 39 23.268893845030888 28.53518041224688 25.916476472306833 22.279449270415398 40 24.785675785389408 26.08348110157488 26.474090658829407 22.65675245420631 41 20.65250405699756 26.09071282628337 27.5345025585842 25.72228055813487 42 22.795505145613188 26.163030073368258 26.062943003402765 24.978521777615786 43 22.494568974743924 26.327527704737356 26.709555615337816 24.468347705180904 44 22.08149285939502 27.46421019441769 27.136950545609523 23.317346400577765 45 21.394961127069116 29.129965663771085 25.87568954495095 23.599383664208844 46 22.94452688610612 28.354290871538534 26.54298488955228 22.158197352803064 47 22.202600142513187 26.98619319118655 28.592648517930336 22.218558148369922 48 23.356735194490007 25.773818649557374 28.91050692461747 21.958939231335158 49 23.567130172008984 25.04953731425315 28.833657796715258 22.54967471702261 50 21.68924411120657 28.266353099083307 27.88475909196536 22.159643697744762 51 20.917811930803 28.449942483682815 26.77695528962093 23.855290295893248 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1222.0 1 1733.0 2 2244.0 3 5793.0 4 9342.0 5 7310.5 6 5279.0 7 5308.0 8 5337.0 9 5631.0 10 5925.0 11 6350.0 12 6775.0 13 7109.0 14 7443.0 15 7363.5 16 7284.0 17 7397.5 18 7511.0 19 7710.5 20 7910.0 21 8315.5 22 8721.0 23 9695.0 24 10669.0 25 12018.0 26 16907.0 27 20447.0 28 23237.0 29 26027.0 30 32609.0 31 39191.0 32 45079.5 33 50968.0 34 57272.0 35 63576.0 36 64733.5 37 65891.0 38 75546.5 39 85202.0 40 97699.5 41 110197.0 42 124767.0 43 139337.0 44 144287.0 45 149237.0 46 151575.0 47 153913.0 48 153908.0 49 153903.0 50 151540.5 51 149178.0 52 141656.0 53 134134.0 54 125697.5 55 117261.0 56 113385.0 57 109509.0 58 104441.5 59 99374.0 60 93395.5 61 87417.0 62 77930.0 63 68443.0 64 59833.0 65 51223.0 66 43210.5 67 35198.0 68 28981.5 69 22765.0 70 19223.0 71 15681.0 72 13288.5 73 10896.0 74 9551.5 75 6083.0 76 3959.0 77 3143.5 78 2328.0 79 1608.0 80 888.0 81 636.0 82 384.0 83 301.0 84 218.0 85 163.5 86 109.0 87 79.0 88 49.0 89 35.5 90 22.0 91 20.0 92 18.0 93 11.5 94 5.0 95 4.0 96 3.0 97 5.0 98 7.0 99 3.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2074194.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.949811107250635 #Duplication Level Percentage of deduplicated Percentage of total 1 78.96650966693059 15.75366951654146 2 6.888805795996676 2.7486074876933406 3 2.266456227349403 1.356461208554175 4 1.17456384057109 0.9372930701120037 5 0.7680373869807158 0.7661100396785818 6 0.5090459524566281 0.609322235785213 7 0.40910354671737736 0.5713076936222574 8 0.3389398401429918 0.540942863005953 9 0.2907735009483024 0.5220788777021336 >10 5.374978159864514 28.92887429097798 >50 2.634291094993766 36.8524298426341 >100 0.3745420368829721 9.638787419529853 >500 0.0034588313943986035 0.43580344108675106 >1k 4.94118770628372E-4 0.33831201307616593 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4543 0.21902483567110886 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 2321 0.11189888698935586 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.031578531227069405 0.0 2 0.0 0.0 0.0 0.13316015763231404 0.0 3 0.0 0.0 0.0 0.1933763187050006 0.0 4 0.0 0.0 0.0 0.328513147757635 0.0 5 0.0 0.0 0.0 0.5579034555109117 0.0 6 0.0 0.0 0.0 0.8567665319637411 0.0 7 0.0 0.0 0.0 0.9899749010941118 0.0 8 0.0 0.0 0.0 1.333433613249291 0.0 9 0.0 0.0 0.0 1.4558426068149846 0.0 10 0.0 0.0 0.0 1.702251573382239 0.0 11 0.0 0.0 0.0 2.036164408922213 0.0 12 0.0 0.0 0.0 2.2853696423767498 0.0 13 0.0 0.0 0.0 2.403777081603746 0.0 14 0.0 0.0 0.0 2.4610041297969234 0.0 15 0.0 0.0 0.0 2.5370818737302296 0.0 16 0.0 0.0 0.0 2.7002295831537455 0.0 17 0.0 0.0 0.0 2.8813601813523713 0.0 18 0.0 0.0 0.0 3.094744271750858 0.0 19 0.0 0.0 0.0 3.2236136060561353 0.0 20 0.0 0.0 0.0 3.35421855429145 0.0 21 0.0 0.0 0.0 3.5153413807965888 0.0 22 0.0 0.0 0.0 3.7060178556104204 0.0 23 0.0 0.0 0.0 3.897610348887327 0.0 24 0.0 0.0 0.0 4.053960237084863 0.0 25 0.0 0.0 0.0 4.182588513899857 0.0 26 0.0 0.0 0.0 4.313434519625455 0.0 27 0.0 0.0 0.0 4.4548388434254464 0.0 28 0.0 0.0 0.0 4.594555764793457 0.0 29 0.0 0.0 0.0 4.745747022698938 0.0 30 0.0 0.0 0.0 4.932711212162411 0.0 31 0.0 0.0 0.0 5.095521441099531 0.0 32 0.0 0.0 0.0 5.255535403149368 0.0 33 0.0 0.0 0.0 5.4148744042264125 0.0 34 0.0 0.0 0.0 5.5828914749536445 0.0 35 0.0 0.0 0.0 5.770337779397684 0.0 36 0.0 0.0 0.0 5.948045361234292 0.0 37 0.0 0.0 0.0 6.133659628752181 0.0 38 0.0 0.0 0.0 6.340583378411084 0.0 39 0.0 0.0 0.0 6.633034325622386 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGATCG 45 3.8562575E-10 45.000004 9 TCGTTAA 30 2.166351E-6 44.999996 12 TATAGCG 160 0.0 43.593754 1 TACGGGA 840 0.0 42.05357 4 TAACGCG 65 0.0 41.53846 1 ACGGGAC 690 0.0 39.130432 5 AGGGCGA 1990 0.0 39.120605 6 GGGCGAT 3920 0.0 38.686226 7 TATCACG 35 6.2507224E-6 38.571426 1 CGAACGC 35 6.2507224E-6 38.571426 14 TATCGTG 35 6.2507224E-6 38.571426 1 TAAGGGA 2655 0.0 37.966103 4 CGTAAGG 350 0.0 37.92857 2 GTTACGG 155 0.0 37.741936 2 TAGGGCG 865 0.0 37.716763 5 CGGTCTA 245 0.0 37.65306 31 AAGGGAT 2825 0.0 37.592922 5 AACACGT 905 0.0 37.54144 41 TCGTTAG 60 1.5643309E-10 37.499996 1 CGGATTA 30 1.1402389E-4 37.499996 17 >>END_MODULE