##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547974_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 4046659 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.795884456782744 31.0 31.0 31.0 30.0 33.0 2 31.13820116792643 31.0 31.0 33.0 30.0 34.0 3 31.302029402526873 31.0 31.0 34.0 30.0 34.0 4 35.17960544735793 35.0 35.0 37.0 33.0 37.0 5 34.982821384257974 35.0 35.0 37.0 32.0 37.0 6 35.017429934175325 36.0 35.0 37.0 32.0 37.0 7 35.505413972365844 35.0 35.0 37.0 35.0 37.0 8 35.60551852775339 37.0 35.0 37.0 35.0 37.0 9 37.40739459391068 39.0 37.0 39.0 35.0 39.0 10 36.43383714812639 38.0 35.0 39.0 32.0 39.0 11 35.98277443194497 38.0 35.0 39.0 30.0 39.0 12 35.60673409842539 37.0 35.0 39.0 30.0 39.0 13 35.415827723561584 37.0 35.0 39.0 30.0 39.0 14 36.335155494940395 38.0 35.0 40.0 30.0 41.0 15 36.52854317598789 38.0 35.0 40.0 30.0 41.0 16 36.651774463823116 38.0 35.0 40.0 31.0 41.0 17 36.578419135390455 38.0 35.0 40.0 31.0 41.0 18 36.489531734697685 38.0 35.0 40.0 30.0 41.0 19 36.465207965385765 38.0 35.0 40.0 30.0 41.0 20 36.349323726066366 38.0 34.0 40.0 30.0 41.0 21 36.23902755334709 38.0 34.0 40.0 30.0 41.0 22 36.13335667769387 38.0 34.0 40.0 30.0 41.0 23 36.049513932357534 38.0 34.0 40.0 30.0 41.0 24 35.95427734335905 38.0 34.0 40.0 29.0 41.0 25 35.77795831079416 38.0 34.0 40.0 29.0 41.0 26 35.55140178601656 38.0 34.0 40.0 28.0 41.0 27 35.632297161683255 38.0 34.0 40.0 29.0 41.0 28 35.669473261769774 38.0 34.0 40.0 29.0 41.0 29 35.65903180870936 38.0 34.0 40.0 29.0 41.0 30 35.57253897597994 38.0 34.0 40.0 29.0 41.0 31 35.47616836506362 38.0 34.0 40.0 27.0 41.0 32 35.36987302364741 38.0 34.0 40.0 27.0 41.0 33 35.23949658224229 38.0 34.0 40.0 27.0 41.0 34 35.10711725401127 38.0 34.0 40.0 26.0 41.0 35 34.98269535436517 38.0 33.0 40.0 25.0 41.0 36 34.92289021634885 38.0 33.0 40.0 25.0 41.0 37 34.87501887359424 38.0 33.0 40.0 25.0 41.0 38 34.769536548545354 37.0 33.0 40.0 24.0 41.0 39 34.726864062427794 37.0 33.0 40.0 24.0 41.0 40 34.554119830704785 37.0 33.0 40.0 24.0 41.0 41 34.49553915958819 37.0 33.0 40.0 24.0 41.0 42 34.47771630868823 37.0 33.0 40.0 24.0 41.0 43 34.44084095052239 37.0 33.0 40.0 24.0 41.0 44 34.29195837850434 37.0 33.0 40.0 23.0 41.0 45 34.16457502349469 37.0 33.0 40.0 23.0 41.0 46 34.1088248355001 37.0 33.0 40.0 23.0 41.0 47 34.056939069983414 37.0 33.0 40.0 23.0 41.0 48 33.96792712210245 36.0 33.0 40.0 23.0 41.0 49 33.81091735182035 36.0 32.0 40.0 23.0 41.0 50 33.68756151679694 36.0 32.0 40.0 23.0 41.0 51 33.356067560918774 36.0 32.0 39.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 2.0 11 7.0 12 7.0 13 17.0 14 49.0 15 152.0 16 480.0 17 1174.0 18 2464.0 19 4792.0 20 8145.0 21 12606.0 22 19379.0 23 27651.0 24 39062.0 25 53826.0 26 69403.0 27 82601.0 28 95781.0 29 113412.0 30 135784.0 31 163787.0 32 197321.0 33 244495.0 34 340404.0 35 383042.0 36 350947.0 37 427197.0 38 576400.0 39 696212.0 40 59.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.38310912780148 24.771966207184743 31.3168962346469 11.528028430366879 2 29.792033378646433 27.36096616987001 29.714141962542435 13.132858488941125 3 28.757748058336517 26.167438373235797 31.07316430665396 14.001649261773725 4 25.74471928571199 28.657887902094046 30.563904692735417 15.033488119458546 5 23.257210454352588 33.698070432917625 29.39009686756408 13.654622245165704 6 21.983344778989284 42.81109428790516 25.15833431974377 10.047226613361788 7 91.80407837675475 2.767912986985066 4.412084141510317 1.0159244947498665 8 92.31521608319356 2.2692299993649083 4.108277964612289 1.3072759528292353 9 87.55187921690461 5.212398672583976 5.316706942690254 1.9190151678211582 10 39.87210189936933 37.8303187889071 11.721224842518236 10.576354469205338 11 29.50616792766576 26.216417049225054 27.038749743924555 17.23866527918463 12 29.957231385199496 24.52615849272202 27.335611920846308 18.180998201232175 13 24.403044585669313 29.389800326639826 27.928644345866555 18.278510741824306 14 19.056930667990557 32.413825825205436 29.093481808079208 19.4357616987248 15 18.219474386154108 29.03516209297596 35.45907871159888 17.286284809271056 16 22.543732990597924 27.34003532296643 33.50991521647858 16.60631646995707 17 22.777975609014746 26.390437148274664 27.879344417209357 22.952242825501234 18 23.042514825192832 27.45089220514998 30.496293362005545 19.010299607651646 19 25.02348233443935 28.683662250760445 27.34497767170399 18.94787774309622 20 26.256202956562436 29.002592014795415 27.048288476988052 17.692916551654093 21 24.743646548918502 27.8437595062989 29.717749877120852 17.69484406766174 22 24.079641996026847 25.15331783577514 29.514742902725434 21.252297265472578 23 20.85216471167944 29.228580910820508 29.50433925863286 20.414915118867192 24 20.819471074780456 28.596652201235635 32.06037375523858 18.52350296874533 25 21.259142418474102 29.727140339722226 29.408284710918313 19.605432530885356 26 20.87502307459067 31.480265572167067 27.219565572488317 20.42514578075395 27 19.54713752752579 31.870908816384087 29.40346592089919 19.178487735190934 28 18.13305741847781 30.37817122717778 31.723997500160007 19.764773854184405 29 19.47824118612416 28.397524970599203 31.789557756163788 20.33467608711285 30 21.12409273922018 29.05821814983669 30.477734842495995 19.339954268447134 31 23.643603278655306 28.866059630920223 27.9993446445574 19.49099244586707 32 24.242690080879065 28.783374136540786 28.18154433076768 18.79239145181247 33 23.357391863263004 28.904931203741157 27.789022994030383 19.948653938965453 34 20.424182022750127 29.359503728878565 30.107898886464117 20.10841536190719 35 20.25675995926516 28.987097751503153 30.04389547031267 20.712246818919013 36 23.1531245899395 29.563943984407874 28.214312102897726 19.068619322754895 37 21.391918617308747 30.616565418534154 28.804428542162807 19.187087421994292 38 20.86143161556237 30.480897945688035 28.39779679977977 20.25987363896983 39 21.06918324474585 29.88148989079633 28.107013711805216 20.942313152652595 40 22.781459964874728 28.294007476290933 28.496693198018413 20.427839360815923 41 19.017638995526926 27.61591722949722 29.81686868105269 23.54957509392316 42 21.582643855091323 27.996799334957558 28.574881155046672 21.845675654904454 43 21.550345606091344 27.62958282375659 29.116216612272 21.70385495788007 44 21.087148682406895 29.63568217633361 28.239097981816602 21.03807115944289 45 20.082122066623356 30.657537489568554 27.320611892427806 21.939728551380284 46 21.095946063159758 30.42186159001784 27.764113556393067 20.718078790429338 47 20.61263378011342 29.264709480092094 29.1910684839024 20.931588255892084 48 21.506852937200787 28.3184226790545 29.666917820355014 20.5078065633897 49 21.8407085944232 27.626098467896604 29.214964740048522 21.318228197631676 50 19.905383675768086 29.57899343631376 29.246719330687366 21.268903557230793 51 19.79853009606196 30.254736067457127 28.039847192461732 21.906886644019178 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1623.0 1 2913.0 2 4203.0 3 14597.0 4 24991.0 5 19406.0 6 13821.0 7 13433.0 8 13045.0 9 13889.0 10 14733.0 11 15957.0 12 17181.0 13 17132.5 14 17084.0 15 17381.0 16 17678.0 17 17104.0 18 16530.0 19 16795.5 20 17061.0 21 19833.0 22 22605.0 23 23361.5 24 24118.0 25 30784.5 26 47666.0 27 57881.0 28 66138.0 29 74395.0 30 90659.5 31 106924.0 32 119317.5 33 131711.0 34 145585.5 35 159460.0 36 171609.5 37 183759.0 38 195847.5 39 207936.0 40 238152.0 41 268368.0 42 285682.0 43 302996.0 44 315408.5 45 327821.0 46 326374.5 47 324928.0 48 324167.0 49 323406.0 50 303028.0 51 282650.0 52 262736.5 53 242823.0 54 223180.0 55 203537.0 56 187004.5 57 170472.0 58 152942.0 59 135412.0 60 121716.0 61 108020.0 62 90902.0 63 73784.0 64 61397.0 65 49010.0 66 38325.0 67 27640.0 68 22042.0 69 16444.0 70 12906.5 71 9369.0 72 8076.0 73 6783.0 74 5311.0 75 3228.5 76 2618.0 77 1969.0 78 1320.0 79 990.5 80 661.0 81 452.0 82 243.0 83 188.5 84 134.0 85 102.5 86 71.0 87 71.5 88 72.0 89 51.5 90 31.0 91 19.5 92 8.0 93 6.0 94 4.0 95 3.0 96 2.0 97 2.5 98 3.0 99 1.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 4046659.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.41977696278797 #Duplication Level Percentage of deduplicated Percentage of total 1 78.53445043379563 15.251215113194384 2 8.715682615772787 3.3851322495351193 3 2.995837436629181 1.745354845083274 4 1.5085580579620181 1.1718344408415584 5 0.8907946377571072 0.8649516592445262 6 0.5416632089892361 0.6311387224511386 7 0.417011291664533 0.5668786392562548 8 0.32285987624634965 0.5015893429549949 9 0.2511696220989043 0.43898922368896165 >10 2.9219920802308095 13.992408546212678 >50 1.547723178256295 22.092508401669672 >100 1.3442858752477542 37.78933340359553 >500 0.00653416831925811 0.808480271128806 >1k 0.0013068336638516218 0.406968315529445 >5k 0.0 0.0 >10k+ 1.3068336638516218E-4 0.3532168256135455 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 13918 0.3439380486470444 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 4188 0.10349278256457982 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.01591436293495449 0.0 2 0.0 0.0 0.0 0.08330328797163289 0.0 3 0.0 0.0 0.0 0.12978607784841767 0.0 4 0.0 0.0 0.0 0.24271874650174377 0.0 5 0.0 0.0 0.0 0.4695725535559087 0.0 6 0.0 0.0 0.0 0.716689990434084 0.0 7 0.0 0.0 0.0 0.8459076981776819 0.0 8 0.0 0.0 0.0 1.1616002237895509 0.0 9 0.0 0.0 0.0 1.2563450490886432 0.0 10 0.0 0.0 0.0 1.45532400926295 0.0 11 0.0 0.0 0.0 1.760711737756999 0.0 12 0.0 0.0 0.0 1.9703908829481307 0.0 13 0.0 0.0 0.0 2.060588747408665 0.0 14 0.0 0.0 0.0 2.0977304981714546 0.0 15 0.0 0.0 0.0 2.162401131402473 0.0 16 0.0 0.0 0.0 2.3332581272600432 0.0 17 0.0 0.0 0.0 2.5470641336470408 0.0 18 2.471174368781753E-5 0.0 0.0 2.8054995491342365 0.0 19 2.471174368781753E-5 0.0 0.0 2.9485311215993244 0.0 20 2.471174368781753E-5 0.0 0.0 3.101496815026915 0.0 21 2.471174368781753E-5 0.0 0.0 3.31340001714995 0.0 22 2.471174368781753E-5 0.0 0.0 3.558268685352534 0.0 23 2.471174368781753E-5 0.0 0.0 3.8293565136078924 0.0 24 2.471174368781753E-5 0.0 0.0 4.023788512943641 0.0 25 2.471174368781753E-5 0.0 0.0 4.194447814851708 0.0 26 2.471174368781753E-5 0.0 0.0 4.362710077622058 0.0 27 2.471174368781753E-5 0.0 0.0 4.557809294037377 0.0 28 2.471174368781753E-5 0.0 0.0 4.7483368378704505 0.0 29 2.471174368781753E-5 0.0 0.0 4.973361975891717 0.0 30 2.471174368781753E-5 0.0 0.0 5.2318221031226 0.0 31 2.471174368781753E-5 0.0 0.0 5.464903269586095 0.0 32 2.471174368781753E-5 0.0 0.0 5.681724108703007 0.0 33 2.471174368781753E-5 0.0 0.0 5.909195709349367 0.0 34 2.471174368781753E-5 0.0 0.0 6.159797502087525 0.0 35 2.471174368781753E-5 0.0 0.0 6.446503152353584 0.0 36 2.471174368781753E-5 0.0 0.0 6.704938567840779 0.0 37 2.471174368781753E-5 0.0 0.0 6.969403648787803 0.0 38 2.471174368781753E-5 0.0 0.0 7.256702380902369 0.0 39 2.471174368781753E-5 0.0 0.0 7.655203959612114 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGTCTA 330 0.0 42.272728 31 GCGTAAG 290 0.0 41.12069 1 CGACGGT 340 0.0 41.02941 28 ACGGTAC 55 6.184564E-11 40.909092 20 TACGGGA 1575 0.0 40.57143 4 CGTAAGG 680 0.0 40.036762 2 CGTTTTT 8995 0.0 39.571987 1 ACGGGAC 1375 0.0 38.945454 5 AGGGCGA 3465 0.0 38.896107 6 TAGGGAC 5130 0.0 38.859646 5 CGAATAT 275 0.0 38.454544 14 TAGGGCG 1270 0.0 38.267715 5 CGTTAGG 730 0.0 38.219177 2 TAGGGAT 7000 0.0 38.153572 5 ACGGGAT 2115 0.0 38.085106 5 GTAGGGA 5920 0.0 37.550674 4 CGGACCG 90 0.0 37.5 6 CGGGTAT 265 0.0 37.35849 6 TAAGGGA 6320 0.0 37.34573 4 CGGGATT 2080 0.0 37.211536 6 >>END_MODULE