##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547973_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2227561 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.937497558989406 31.0 31.0 33.0 30.0 33.0 2 31.285780277173107 31.0 31.0 33.0 30.0 34.0 3 31.48726477075151 31.0 31.0 34.0 30.0 34.0 4 35.354490404527645 37.0 35.0 37.0 33.0 37.0 5 35.1781199257843 37.0 35.0 37.0 32.0 37.0 6 35.20495196315611 37.0 35.0 37.0 32.0 37.0 7 35.554515454346706 36.0 35.0 37.0 35.0 37.0 8 35.638426063304216 37.0 35.0 37.0 35.0 37.0 9 37.46449502392976 39.0 37.0 39.0 35.0 39.0 10 36.63616080547289 39.0 37.0 39.0 32.0 39.0 11 36.237745677896136 38.0 35.0 39.0 31.0 39.0 12 35.56757772289962 37.0 35.0 39.0 30.0 39.0 13 35.23369999744115 37.0 35.0 39.0 30.0 39.0 14 36.177905341312766 38.0 35.0 40.0 30.0 41.0 15 36.43187683749177 38.0 35.0 40.0 30.0 41.0 16 36.59690396806193 38.0 35.0 40.0 31.0 41.0 17 36.517156656989414 38.0 35.0 40.0 31.0 41.0 18 36.44969812274501 38.0 35.0 40.0 30.0 41.0 19 36.414205492015704 38.0 35.0 40.0 30.0 41.0 20 36.29902435892889 38.0 34.0 40.0 30.0 41.0 21 36.17058432967717 38.0 34.0 40.0 30.0 41.0 22 36.063381429285215 38.0 34.0 40.0 30.0 41.0 23 36.000110434686185 38.0 34.0 40.0 30.0 41.0 24 35.90444436762899 38.0 34.0 40.0 30.0 41.0 25 35.748838303417955 37.0 34.0 40.0 29.0 41.0 26 35.50748958165455 37.0 34.0 40.0 29.0 41.0 27 35.58968935081912 37.0 34.0 40.0 29.0 41.0 28 35.63802517641492 37.0 34.0 40.0 29.0 41.0 29 35.62466123262169 37.0 34.0 40.0 29.0 41.0 30 35.54796299629954 37.0 34.0 40.0 29.0 41.0 31 35.45383358749772 37.0 34.0 40.0 29.0 41.0 32 35.34568884982274 37.0 34.0 40.0 28.0 41.0 33 35.23708217193603 37.0 34.0 40.0 27.0 41.0 34 35.060443687064016 37.0 34.0 40.0 26.0 41.0 35 34.96090297863897 37.0 33.0 40.0 26.0 41.0 36 34.87424003203504 37.0 33.0 40.0 25.0 41.0 37 34.82054318602274 37.0 33.0 40.0 25.0 41.0 38 34.760249887657395 37.0 33.0 40.0 25.0 41.0 39 34.72522368635472 37.0 33.0 40.0 25.0 41.0 40 34.51514593764211 37.0 33.0 40.0 24.0 41.0 41 34.47435962471959 37.0 33.0 40.0 24.0 41.0 42 34.44143662059086 36.0 33.0 40.0 24.0 41.0 43 34.39435822408455 36.0 33.0 40.0 24.0 41.0 44 34.23724153906448 36.0 33.0 40.0 24.0 41.0 45 34.1176950934228 36.0 33.0 40.0 23.0 41.0 46 34.07608276496132 36.0 33.0 40.0 23.0 41.0 47 34.012446797192084 36.0 33.0 40.0 23.0 41.0 48 33.9370854490629 35.0 33.0 40.0 23.0 41.0 49 33.79482806531448 35.0 33.0 40.0 23.0 41.0 50 33.671321234300656 35.0 32.0 39.0 23.0 41.0 51 33.34212396428201 35.0 32.0 39.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 1.0 10 1.0 11 4.0 12 8.0 13 6.0 14 38.0 15 109.0 16 320.0 17 722.0 18 1424.0 19 2616.0 20 4438.0 21 6911.0 22 10315.0 23 14615.0 24 20554.0 25 27976.0 26 35537.0 27 42555.0 28 50076.0 29 59834.0 30 72490.0 31 88195.0 32 108801.0 33 138357.0 34 211567.0 35 239284.0 36 186064.0 37 227788.0 38 307167.0 39 369745.0 40 42.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.34285301277945 23.81793360540968 29.721116503655793 12.118096878155077 2 30.12855764668173 26.540148619948006 29.914511880931656 13.416781852438609 3 29.668368228748843 25.97661747534635 30.089277016431875 14.265737279472932 4 25.946898872803036 29.014873217837806 29.742126029320858 15.296101880038302 5 23.790414718160356 33.26723712616624 28.69779997046097 14.244548185212436 6 22.477139795498307 41.83467927477631 25.461614743659094 10.226566186066286 7 91.04751789064363 3.358471440288279 4.335549060160417 1.2584616089076799 8 91.60880442780243 2.5951253411242163 4.179144813542704 1.6169254175306533 9 86.91241227512961 5.156985599945411 5.598454991804938 2.332147133120036 10 44.73336532647142 33.22934815253095 11.32417922561941 10.713107295378219 11 38.559482770617734 23.695602499774417 22.14035889477325 15.604555834834603 12 35.41245335144582 22.394672918048038 25.093050201543303 17.099823528962844 13 25.198636535654916 30.54856859138762 26.130328193032646 18.122466679924816 14 19.55246118961501 33.38328333096153 27.986079842482432 19.07817563694103 15 19.055145964577402 25.958301478612704 37.92578519735262 17.06076735945727 16 24.023853892216643 23.687297452235875 34.81969741793827 17.469151237609207 17 22.749500462613597 23.210049017737337 27.528000355545817 26.512450164103253 18 24.575488617371196 25.149255171912237 30.460984008967657 19.81427220174891 19 27.904555700158156 27.18843614159163 25.412278272065276 19.494729886184935 20 29.284719924617104 27.102826813721375 25.27567146309349 18.33678179856803 21 26.107747442157585 27.364772502301843 28.38292643837812 18.144553617162448 22 25.417036839844116 24.175948492544087 27.60391297926297 22.803101688348825 23 22.672330858728447 27.55735982089828 27.832369124796134 21.937940195577134 24 22.852797297133502 25.672922088328892 32.21694041150837 19.257340203029234 25 22.12774420094444 26.65834964788843 29.668188660153415 21.545717491013715 26 20.55068301159878 30.39732694188846 26.764384903488615 22.28760514302414 27 20.362270662846047 31.09427755289305 28.171663985857176 20.371787798403727 28 18.83899026783105 29.66145483782487 31.354427555519244 20.14512733882484 29 20.529134780147434 27.283472820721855 31.37512283614231 20.812269562988398 30 22.296314219902396 28.077974071192664 29.878508377548357 19.747203331356584 31 26.601381510988926 26.891519469051577 26.807212013498173 19.699887006461328 32 28.3802329094467 26.312006719456843 26.63338961312395 18.674370757972508 33 27.578099993670207 26.756349208843215 25.768407688947686 19.897143108538888 34 21.714332402120526 27.776209046576056 28.992112898367317 21.517345652936104 35 21.435462373420975 28.2361291116158 29.655439289878032 20.672969225085193 36 27.311126384417754 28.25004567776146 25.68306771397057 18.75576022385021 37 23.195189716465677 30.1444494673771 27.19027671969477 19.470084096462454 38 22.857825217805484 30.78986389149388 24.836536462974525 21.515774427726107 39 22.52266043443928 29.505813757737727 26.52452615214578 21.446999655677217 40 25.233158598125932 25.773884531108237 26.78970407544395 22.20325279532188 41 20.148180004947115 26.18927158448186 27.699578148477187 25.962970262093833 42 22.657516449605644 26.6539951094493 26.336024019095323 24.352464421849724 43 22.438083625992732 25.902635214030052 27.48225525586056 24.177025904116654 44 21.257330326756485 27.72965588821137 28.45304797489272 22.55996581013943 45 21.014239340695944 30.475214820155315 25.522937418997728 22.98760842015101 46 22.616574809848082 29.71698642596095 26.86126216072197 20.805176603468997 47 21.628588397803696 27.37155121677925 28.130183640313327 22.869676745103725 48 23.272898026137106 25.99686383448085 29.649378849782345 21.0808592895997 49 23.294311581141887 24.928834721024476 29.738040843774872 22.03881285405877 50 21.08207137761884 29.272509260128004 27.828912429334146 21.816506932919008 51 20.724191166931007 29.594610428176825 26.81910843294527 22.862089971946897 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 962.0 1 1747.0 2 2532.0 3 6643.0 4 10754.0 5 8482.0 6 6210.0 7 6047.5 8 5885.0 9 6468.0 10 7051.0 11 7261.5 12 7472.0 13 7996.5 14 8521.0 15 8382.5 16 8244.0 17 7969.0 18 7694.0 19 7942.0 20 8190.0 21 9221.5 22 10253.0 23 11654.5 24 13056.0 25 14058.0 26 18803.5 27 22547.0 28 27944.0 29 33341.0 30 38705.0 31 44069.0 32 51037.5 33 58006.0 34 62980.5 35 67955.0 36 74438.0 37 80921.0 38 87472.5 39 94024.0 40 110294.5 41 126565.0 42 145264.0 43 163963.0 44 167095.5 45 170228.0 46 167095.5 47 163963.0 48 165047.5 49 166132.0 50 161448.0 51 156764.0 52 149823.5 53 142883.0 54 130270.0 55 117657.0 56 113866.0 57 110075.0 58 104960.0 59 99845.0 60 93917.0 61 87989.0 62 78426.0 63 68863.0 64 57711.5 65 46560.0 66 40273.5 67 33987.0 68 27575.0 69 21163.0 70 17937.0 71 14711.0 72 12458.0 73 10205.0 74 8102.5 75 4797.5 76 3595.0 77 2715.0 78 1835.0 79 1419.0 80 1003.0 81 710.5 82 418.0 83 310.0 84 202.0 85 147.0 86 92.0 87 75.0 88 58.0 89 45.0 90 32.0 91 24.0 92 16.0 93 10.5 94 5.0 95 4.0 96 3.0 97 2.5 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2227561.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.648947735800736 #Duplication Level Percentage of deduplicated Percentage of total 1 79.5312472196805 14.831740727628691 2 7.060356843882014 2.6333645155531746 3 2.2705371599584456 1.2702938648477549 4 1.1642776539881863 0.8685021247674553 5 0.695474714026172 0.6484935796722524 6 0.47346960505661234 0.5297825951514589 7 0.3925907390859877 0.5124982922341776 8 0.31004591564499007 0.4625624061249523 9 0.2804968904814476 0.4707874665578826 >10 4.428831306706119 21.758784252810226 >50 2.4580609313433497 33.140010619041156 >100 0.9306695925843764 22.123995370293716 >500 0.003448749116695707 0.406795803347006 >1k 2.4633922262112194E-4 0.10056194393298658 >5k 2.4633922262112194E-4 0.24182643803711346 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5264 0.2363122715831351 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.489214885697855E-5 0.0 0.0 0.030885798413601243 0.0 2 4.489214885697855E-5 0.0 0.0 0.12004160604356065 0.0 3 4.489214885697855E-5 0.0 0.0 0.1764710371567827 0.0 4 4.489214885697855E-5 0.0 0.0 0.29615350600948753 0.0 5 4.489214885697855E-5 0.0 0.0 0.4998291853735992 0.0 6 4.489214885697855E-5 0.0 0.0 0.7404511032470042 0.0 7 4.489214885697855E-5 0.0 0.0 0.851828524561168 0.0 8 4.489214885697855E-5 0.0 0.0 1.1186674573670485 0.0 9 4.489214885697855E-5 0.0 0.0 1.212088019138421 0.0 10 4.489214885697855E-5 0.0 0.0 1.4095685819602695 0.0 11 4.489214885697855E-5 0.0 0.0 1.7133088611265865 0.0 12 4.489214885697855E-5 0.0 0.0 1.9348067235869186 0.0 13 4.489214885697855E-5 0.0 0.0 2.039405430423679 0.0 14 4.489214885697855E-5 0.0 0.0 2.087170676807504 0.0 15 4.489214885697855E-5 0.0 0.0 2.155631203814396 0.0 16 4.489214885697855E-5 0.0 0.0 2.2969516884161645 0.0 17 4.489214885697855E-5 0.0 0.0 2.4581593949615748 0.0 18 4.489214885697855E-5 0.0 0.0 2.6461677143746005 0.0 19 4.489214885697855E-5 0.0 0.0 2.7620343505744622 0.0 20 4.489214885697855E-5 0.0 0.0 2.8810434371943123 0.0 21 4.489214885697855E-5 0.0 0.0 3.0361458114951736 0.0 22 4.489214885697855E-5 0.0 0.0 3.196141430021445 0.0 23 4.489214885697855E-5 0.0 0.0 3.376069162640215 0.0 24 4.489214885697855E-5 0.0 0.0 3.5134840302914263 0.0 25 4.489214885697855E-5 0.0 0.0 3.6319095189761357 0.0 26 4.489214885697855E-5 0.0 0.0 3.751187958489128 0.0 27 4.489214885697855E-5 0.0 0.0 3.8849216699340667 0.0 28 4.489214885697855E-5 0.0 0.0 4.007836373504474 0.0 29 4.489214885697855E-5 0.0 0.0 4.1515361419956625 0.0 30 4.489214885697855E-5 0.0 0.0 4.316469896896201 0.0 31 4.489214885697855E-5 0.0 0.0 4.468384928628217 0.0 32 4.489214885697855E-5 0.0 0.0 4.605575335535144 0.0 33 4.489214885697855E-5 0.0 0.0 4.7538092110608865 0.0 34 4.489214885697855E-5 0.0 0.0 4.914612888266584 0.0 35 4.489214885697855E-5 0.0 0.0 5.093777454354785 0.0 36 4.489214885697855E-5 0.0 0.0 5.254940268751338 0.0 37 4.489214885697855E-5 0.0 0.0 5.425754895152142 0.0 38 4.489214885697855E-5 0.0 0.0 5.618117753004295 0.0 39 4.489214885697855E-5 0.0 0.0 5.919882777620905 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTCGAAC 20 7.034714E-4 45.0 37 CGTAGTC 20 7.034714E-4 45.0 16 ACTACGC 20 7.034714E-4 45.0 28 TATCGCC 20 7.034714E-4 45.0 10 TACCGTA 20 7.034714E-4 45.0 24 AGTCGAC 20 7.034714E-4 45.0 44 GCGATAC 100 0.0 42.749996 9 CGACGTC 70 0.0 41.785713 18 CACGACC 465 0.0 41.12903 27 ACACGAC 480 0.0 40.312504 26 GTTGACG 90 0.0 40.0 1 CGCAATA 45 1.9297659E-8 40.0 13 CGGTCTA 165 0.0 39.545456 31 ATTCGCG 80 0.0 39.375 1 TAGACGG 265 0.0 39.056602 2 TTACGCG 75 0.0 39.0 1 CCGCATG 75 0.0 39.0 1 ATACGAG 185 0.0 38.91892 1 TCGATAG 110 0.0 38.86364 1 TTCGATC 35 6.25093E-6 38.571426 35 >>END_MODULE