##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547972_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2390516 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.853639967270663 31.0 31.0 31.0 30.0 33.0 2 31.210030386744954 31.0 31.0 33.0 30.0 34.0 3 31.40572872133046 31.0 31.0 34.0 30.0 34.0 4 35.27210108612534 37.0 35.0 37.0 33.0 37.0 5 35.08435961106305 35.0 35.0 37.0 32.0 37.0 6 35.11367378423738 37.0 35.0 37.0 32.0 37.0 7 35.524055475888886 35.0 35.0 37.0 35.0 37.0 8 35.614969320431236 37.0 35.0 37.0 35.0 37.0 9 37.428556010501495 39.0 37.0 39.0 35.0 39.0 10 36.52470345314568 38.0 35.0 39.0 32.0 39.0 11 36.10497900871611 38.0 35.0 39.0 31.0 39.0 12 35.78504473511158 37.0 35.0 39.0 30.0 39.0 13 35.63836426947153 37.0 35.0 39.0 30.0 39.0 14 36.66155758840351 38.0 35.0 40.0 31.0 41.0 15 36.81449820875493 38.0 35.0 40.0 31.0 41.0 16 36.88315242399549 38.0 35.0 40.0 31.0 41.0 17 36.792693711315884 38.0 35.0 40.0 31.0 41.0 18 36.715925348334835 38.0 35.0 40.0 31.0 41.0 19 36.70265875651951 38.0 35.0 40.0 31.0 41.0 20 36.60863888800577 38.0 35.0 40.0 30.0 41.0 21 36.49145205470283 38.0 35.0 40.0 30.0 41.0 22 36.35981854963531 38.0 35.0 40.0 30.0 41.0 23 36.27665282307251 38.0 34.0 40.0 30.0 41.0 24 36.19522646993369 38.0 34.0 40.0 30.0 41.0 25 36.02940453023531 38.0 34.0 40.0 29.0 41.0 26 35.8019670230193 38.0 34.0 40.0 29.0 41.0 27 35.89274449533072 38.0 34.0 40.0 29.0 41.0 28 35.933385511747254 38.0 34.0 40.0 29.0 41.0 29 35.94046138992586 38.0 34.0 40.0 29.0 41.0 30 35.8605757083408 38.0 34.0 40.0 29.0 41.0 31 35.80083421319916 38.0 34.0 40.0 29.0 41.0 32 35.688922391651005 38.0 34.0 40.0 29.0 41.0 33 35.585936676433036 38.0 34.0 40.0 27.0 41.0 34 35.48025154401811 38.0 34.0 40.0 27.0 41.0 35 35.37438611580094 38.0 34.0 40.0 27.0 41.0 36 35.34208011994063 38.0 34.0 40.0 26.0 41.0 37 35.31571802907824 38.0 34.0 40.0 26.0 41.0 38 35.25990832104868 38.0 34.0 40.0 26.0 41.0 39 35.22954332872066 38.0 34.0 40.0 26.0 41.0 40 35.07686039332094 38.0 34.0 40.0 26.0 41.0 41 35.017138559206465 38.0 34.0 40.0 25.0 41.0 42 34.99421170994045 38.0 33.0 40.0 25.0 41.0 43 34.94970625588785 38.0 33.0 40.0 25.0 41.0 44 34.81991168433928 37.0 33.0 40.0 25.0 41.0 45 34.68504707770205 37.0 33.0 40.0 24.0 41.0 46 34.610441427708494 37.0 33.0 40.0 24.0 41.0 47 34.570429564161046 37.0 33.0 40.0 24.0 41.0 48 34.4820582669181 37.0 33.0 40.0 24.0 41.0 49 34.354953491212775 37.0 33.0 40.0 24.0 41.0 50 34.24586449118098 37.0 33.0 40.0 24.0 41.0 51 33.90001029066528 36.0 32.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 2.0 13 6.0 14 25.0 15 71.0 16 202.0 17 521.0 18 1203.0 19 2090.0 20 3867.0 21 6061.0 22 9398.0 23 13543.0 24 19350.0 25 27087.0 26 35387.0 27 42980.0 28 51431.0 29 61617.0 30 74769.0 31 90989.0 32 110125.0 33 137507.0 34 192425.0 35 220651.0 36 209598.0 37 261670.0 38 364217.0 39 453682.0 40 40.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.80082626512435 24.709142293964987 30.090449091325887 12.399582349584776 2 29.609757893274924 26.634709828338316 30.053134971696487 13.70239730669027 3 28.792486643051124 26.319631410122334 30.753862346037426 14.134019600789118 4 25.267222641471548 29.30174907844164 30.048491622729152 15.38253665735766 5 23.10844185941445 33.63662907924482 28.992317976537286 14.262611084803448 6 22.047164712555784 42.40778978262434 25.098346967767625 10.446698537052251 7 92.32303820597728 2.5901520843198704 3.916936761770262 1.1698729479325802 8 93.10935379641884 1.9794471151835 3.6191349482705824 1.292064140127069 9 88.05270493901735 5.135669453791566 5.022221143886926 1.7894044633041568 10 38.60400850694997 42.049289776767864 10.210306059444907 9.13639565683727 11 27.837086219042252 25.789703980228534 29.039588105664215 17.333621695065 12 28.22629089284489 24.03861760389807 28.810474391302964 18.924617111954074 13 24.3155034310584 27.42006328340827 29.33952334977051 18.924909935762823 14 19.208028726852277 31.195984465278627 29.677316529151028 19.918670278718068 15 19.01535066069418 28.281425432835423 34.84820850393806 17.85501540253234 16 23.14471017972689 27.25298638452953 32.86972352412617 16.732579911617407 17 22.384832396018265 26.60392149644679 28.741577132301146 22.2696689752338 18 22.89560078242522 27.027679379682045 30.874463923270124 19.20225591462262 19 25.10600221876783 27.620312936621218 27.57178784831392 19.701896996297034 20 26.887416775290358 28.396170533893102 26.86060248080331 17.855810210013235 21 25.01188028024075 27.5266511497936 29.543747040387935 17.917721529577715 22 24.586658277961746 24.397159441727226 29.516179770392668 21.50000250991836 23 21.43169089853404 28.380818199920014 29.488905324206154 20.698585577339788 24 21.263861024147086 27.20730587036439 32.26671563796268 19.262117467525837 25 21.221652563714276 29.34918653545929 29.456234553544085 19.972926347282343 26 21.072228757305954 31.777909037212048 27.270137493327802 19.879724712154196 27 19.864707033962542 30.511446064364346 29.6473230047404 19.97652389693271 28 18.6136382270606 30.01280895003422 31.612630913158497 19.76092190974668 29 19.996645075791168 27.540790356559004 31.29044105958714 21.172123508062697 30 21.283647547224113 27.929785870498254 30.787662579961818 19.998904002315818 31 23.59678830846562 28.093390715644656 27.85444648770391 20.455374488185814 32 23.720736443512614 28.444695622200395 28.174712070532053 19.659855863754938 33 23.351025468978246 28.316773449748922 28.02683604711284 20.30536503415999 34 20.856877761955996 28.349067732656884 29.664599609456705 21.12945489593042 35 20.438348875305582 28.150700518214478 30.241169688887254 21.169780917592686 36 22.73274891278703 28.490919952010362 28.501461609125396 20.274869526077214 37 21.029309153337607 29.545211159431688 29.183950243378415 20.24152944385229 38 20.750791879242808 30.253049969128003 28.084606001382127 20.911552150247058 39 20.863989197311376 29.492502873856523 28.085986456480526 21.557521472351578 40 22.79629167928598 27.838550338086005 28.111294799951143 21.253863182676877 41 19.502693142401053 27.791824024603894 29.188384432482362 23.517098400512694 42 21.355849532067552 27.81290733883396 27.931333653487368 22.899909475611125 43 20.927197308028894 27.80127805042928 28.79746464779989 22.47405999374194 44 20.82709339740876 28.970314358908283 28.94981669229572 21.25277555138723 45 20.615590943545243 29.695806261075013 27.511131487929802 22.177471307449938 46 21.140624032635632 29.603315769482403 28.00140220772419 21.254657990157774 47 20.60927431567076 28.45264369700935 29.20164516782151 21.736436819498383 48 21.096365805541563 27.732422623400137 29.886978376216682 21.284233194841615 49 21.49640496026799 26.817599212889604 30.05229833224291 21.633697494599495 50 20.159873433183463 29.42101203254862 28.652893350222296 21.76622118404562 51 19.818231712316503 29.01072404451591 28.297739902180112 22.87330434098747 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 830.0 1 1329.0 2 1828.0 3 7059.5 4 12291.0 5 9622.5 6 6954.0 7 6669.5 8 6385.0 9 6753.0 10 7121.0 11 7343.5 12 7566.0 13 7631.0 14 7696.0 15 7939.0 16 8182.0 17 8459.0 18 8736.0 19 9157.0 20 9578.0 21 10494.0 22 11410.0 23 14100.0 24 16790.0 25 20336.5 26 29199.5 27 34516.0 28 40983.0 29 47450.0 30 56193.5 31 64937.0 32 71542.0 33 78147.0 34 88643.5 35 99140.0 36 105413.0 37 111686.0 38 119210.5 39 126735.0 40 140343.0 41 153951.0 42 162679.5 43 171408.0 44 177935.0 45 184462.0 46 182695.5 47 180929.0 48 181033.0 49 181137.0 50 175226.0 51 169315.0 52 155661.5 53 142008.0 54 130171.5 55 118335.0 56 109693.5 57 101052.0 58 92075.5 59 83099.0 60 77424.0 61 71749.0 62 62003.0 63 52257.0 64 42538.0 65 32819.0 66 27172.0 67 21525.0 68 17142.5 69 12760.0 70 10543.0 71 8326.0 72 6926.5 73 5527.0 74 4740.5 75 3036.5 76 2119.0 77 1541.5 78 964.0 79 680.0 80 396.0 81 322.0 82 248.0 83 222.5 84 197.0 85 130.5 86 64.0 87 46.0 88 28.0 89 22.0 90 16.0 91 11.0 92 6.0 93 4.5 94 3.0 95 1.5 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2390516.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.754608016714794 #Duplication Level Percentage of deduplicated Percentage of total 1 76.93114045175587 15.966756643550239 2 7.06065730804693 2.930823495377334 3 2.394015438912982 1.490605560618071 4 1.28890356040301 1.070027526700502 5 0.9052375735267595 0.9393925500274964 6 0.6591840384742043 0.8208663797644291 7 0.5338301594835442 0.7755604995306911 8 0.4481674112418902 0.7441231156953 9 0.38216819454516315 0.7138575966816415 >10 6.894958525824895 37.05159233825033 >50 2.3510389720540292 32.942679747600465 >100 0.14945805670593737 4.079801976563433 >500 8.268726831727311E-4 0.12446318708364691 >1k 2.067181707931828E-4 0.07705476870121677 >5k 2.067181707931828E-4 0.27239461385524794 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6349 0.265591194537079 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.183197267870201E-5 0.0 0.0 0.023467736672751826 0.0 2 4.183197267870201E-5 0.0 0.0 0.09290881131939716 0.0 3 4.183197267870201E-5 0.0 0.0 0.14712304791099495 0.0 4 4.183197267870201E-5 0.0 0.0 0.25827059931830615 0.0 5 4.183197267870201E-5 0.0 0.0 0.4756713613295205 0.0 6 4.183197267870201E-5 0.0 0.0 0.782048729228334 0.0 7 4.183197267870201E-5 0.0 0.0 0.9367851961668526 0.0 8 4.183197267870201E-5 0.0 0.0 1.2975441285479787 0.0 9 4.183197267870201E-5 0.0 0.0 1.4324940724094715 0.0 10 4.183197267870201E-5 0.0 0.0 1.6555839827049892 0.0 11 4.183197267870201E-5 0.0 0.0 1.9489516071007265 0.0 12 4.183197267870201E-5 0.0 0.0 2.1777306656805475 0.0 13 4.183197267870201E-5 0.0 0.0 2.292182942929476 0.0 14 4.183197267870201E-5 0.0 0.0 2.354177926439313 0.0 15 4.183197267870201E-5 0.0 0.0 2.4267982310095393 0.0 16 4.183197267870201E-5 0.0 0.0 2.5651783966306856 0.0 17 4.183197267870201E-5 0.0 0.0 2.746352670302144 0.0 18 4.183197267870201E-5 0.0 0.0 2.9460585078702675 0.0 19 4.183197267870201E-5 0.0 0.0 3.0872832476335654 0.0 20 4.183197267870201E-5 0.0 0.0 3.2276713479432892 0.0 21 4.183197267870201E-5 0.0 0.0 3.397676484909534 0.0 22 4.183197267870201E-5 0.0 0.0 3.595750875543188 0.0 23 4.183197267870201E-5 0.0 0.0 3.8143647647620846 0.0 24 4.183197267870201E-5 0.0 0.0 3.976589154810091 0.0 25 4.183197267870201E-5 0.0 0.0 4.1153876401580245 0.0 26 4.183197267870201E-5 0.0 0.0 4.261548552697409 0.0 27 4.183197267870201E-5 0.0 0.0 4.403484435996245 0.0 28 4.183197267870201E-5 0.0 0.0 4.56349173149228 0.0 29 4.183197267870201E-5 0.0 0.0 4.73914418477015 0.0 30 1.25495918036106E-4 0.0 0.0 4.9502283189068805 0.0 31 1.25495918036106E-4 0.0 0.0 5.137300900726036 0.0 32 1.25495918036106E-4 0.0 0.0 5.327929200222881 0.0 33 1.25495918036106E-4 0.0 0.0 5.51357949497096 0.0 34 1.25495918036106E-4 0.0 0.0 5.6967617033309965 0.0 35 1.25495918036106E-4 0.0 0.0 5.903411648363784 0.0 36 1.25495918036106E-4 0.0 0.0 6.095545898877062 0.0 37 1.25495918036106E-4 0.0 0.0 6.298179974532695 0.0 38 1.25495918036106E-4 0.0 0.0 6.5103935719317505 0.0 39 1.25495918036106E-4 0.0 0.0 6.769417146758273 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTAAGG 420 0.0 41.25 2 TTTAGCG 170 0.0 41.02941 1 TACGGGA 1120 0.0 40.580357 4 CGACGGT 100 0.0 40.5 28 CGTTTTT 4395 0.0 39.67577 1 TAAGGGA 3840 0.0 39.31641 4 ACGGGAT 1455 0.0 39.27835 5 GCTACGA 150 0.0 39.0 10 GACCGAT 1360 0.0 38.547794 9 ACGTCGG 65 9.094947E-12 38.076927 2 TTAGGGA 4115 0.0 38.055893 4 AGGGCGA 1945 0.0 37.712082 6 AAGGGAT 5045 0.0 37.68583 5 GGGACCG 2010 0.0 37.61194 7 AGGGATG 5125 0.0 37.58049 6 GCGTTAG 295 0.0 37.372883 1 ATAGGGA 4005 0.0 37.359547 4 TAGGGAC 3365 0.0 37.31055 5 GGACCGA 1535 0.0 37.23127 8 TAGGGAT 4655 0.0 37.218044 5 >>END_MODULE