##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547970_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1921930 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.787028143584834 31.0 31.0 31.0 30.0 33.0 2 31.12807334294173 31.0 31.0 33.0 30.0 34.0 3 31.281890599553574 31.0 31.0 34.0 30.0 34.0 4 35.165112152887986 35.0 35.0 37.0 33.0 37.0 5 34.976957017165034 35.0 35.0 37.0 32.0 37.0 6 35.024474876816534 36.0 35.0 37.0 32.0 37.0 7 35.47751843199284 35.0 35.0 37.0 35.0 37.0 8 35.5627202863788 37.0 35.0 37.0 35.0 37.0 9 37.36985894387413 39.0 37.0 39.0 35.0 39.0 10 36.348998662802494 38.0 35.0 39.0 32.0 39.0 11 35.97248390940357 37.0 35.0 39.0 31.0 39.0 12 35.408241195048724 37.0 35.0 39.0 30.0 39.0 13 35.12299615490679 37.0 34.0 39.0 29.0 39.0 14 36.09336084040522 38.0 34.0 40.0 29.0 41.0 15 36.31865676689578 38.0 35.0 40.0 30.0 41.0 16 36.461927333461674 38.0 35.0 40.0 31.0 41.0 17 36.392557481281834 38.0 35.0 40.0 30.0 41.0 18 36.3093863980478 38.0 35.0 40.0 30.0 41.0 19 36.240695550826516 38.0 35.0 40.0 30.0 41.0 20 36.124143439147105 38.0 34.0 40.0 30.0 41.0 21 35.99185818422107 38.0 34.0 40.0 30.0 41.0 22 35.85786423022691 38.0 34.0 40.0 29.0 41.0 23 35.783459335147484 37.0 34.0 40.0 29.0 41.0 24 35.675630225866705 37.0 34.0 40.0 29.0 41.0 25 35.495815664462285 37.0 34.0 40.0 29.0 41.0 26 35.24831445474081 37.0 34.0 40.0 27.0 41.0 27 35.3244296098193 37.0 34.0 40.0 28.0 41.0 28 35.36276503306572 37.0 34.0 40.0 28.0 41.0 29 35.36814972449569 37.0 34.0 40.0 28.0 41.0 30 35.276131284698195 37.0 34.0 40.0 27.0 41.0 31 35.183789211885966 37.0 34.0 40.0 27.0 41.0 32 35.0411487411092 37.0 34.0 40.0 27.0 41.0 33 34.90384821507547 37.0 33.0 40.0 26.0 41.0 34 34.74940866732919 37.0 33.0 40.0 25.0 41.0 35 34.61661663015823 37.0 33.0 40.0 25.0 41.0 36 34.51754330282581 37.0 33.0 40.0 24.0 41.0 37 34.467182467623694 37.0 33.0 40.0 24.0 41.0 38 34.41216277387834 37.0 33.0 40.0 24.0 41.0 39 34.37724735031973 37.0 33.0 40.0 24.0 41.0 40 34.18732784232516 36.0 33.0 40.0 23.0 41.0 41 34.13705493956596 36.0 33.0 40.0 23.0 41.0 42 34.09782562320168 36.0 33.0 40.0 23.0 41.0 43 34.04491422684489 36.0 33.0 40.0 23.0 41.0 44 33.89072130618701 36.0 33.0 40.0 23.0 41.0 45 33.759333586551016 36.0 32.0 40.0 23.0 41.0 46 33.68736634528833 35.0 32.0 40.0 23.0 41.0 47 33.626100326234564 35.0 32.0 40.0 23.0 41.0 48 33.54499695618467 35.0 32.0 40.0 23.0 41.0 49 33.3999323596593 35.0 32.0 39.0 22.0 41.0 50 33.274262330053645 35.0 32.0 39.0 22.0 41.0 51 32.90840301155609 35.0 31.0 39.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 1.0 12 3.0 13 8.0 14 24.0 15 81.0 16 263.0 17 604.0 18 1332.0 19 2539.0 20 4290.0 21 6787.0 22 9850.0 23 14523.0 24 19936.0 25 27766.0 26 35019.0 27 41083.0 28 47779.0 29 56600.0 30 66887.0 31 81279.0 32 98320.0 33 123523.0 34 180170.0 35 207049.0 36 166156.0 37 192608.0 38 248402.0 39 289005.0 40 42.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.140260051094472 26.375986638431158 30.174095830753462 12.309657479720904 2 30.427591015281514 27.181999344409007 28.80588783150271 13.584521808806773 3 28.978318669254342 26.342218499112867 30.753929643639466 13.925533187993318 4 25.50311405722373 29.240555067041985 30.54684613903732 14.709484736696965 5 22.923519587081735 33.49627717970998 29.444048430483942 14.136154802724347 6 21.253791761406504 42.52355704942428 26.116455854271486 10.106195334897732 7 89.82033684889669 3.418646880999828 5.402538073707159 1.3584781963963308 8 90.16150432117715 2.978776542329846 5.045293012752806 1.8144261237401986 9 85.8686840831872 5.110175708792724 6.65175110435864 2.369389103661424 10 43.273168117465254 27.423943639986888 16.737394181890078 12.565494060657775 11 35.98564984156551 26.190704135946678 21.17834676601125 16.645299256476562 12 32.71253375513156 23.51797411976503 25.61680186062968 18.15269026447373 13 23.70216397059206 32.452378598596205 26.884954186676936 16.960503244134802 14 19.492489320630824 35.2490465313513 27.407814020281695 17.85065012773618 15 18.381418678099617 28.349315531783155 36.26047774892946 17.008788041187763 16 21.408167831294584 24.969275676013176 35.44655632619294 18.1760001664993 17 21.282200704500166 26.743846029772158 26.24361969478597 25.73033357094171 18 22.997455682569086 27.57956845462634 30.040532173388208 19.382443689416366 19 25.70208072094197 30.563027789773823 24.42851716763878 19.30637432164543 20 27.649290036577817 28.168247542834546 25.725806871217994 18.456655549369643 21 24.507812459350756 30.14282518093791 27.292721379030453 18.05664098068088 22 23.87339809462363 26.55918789966336 26.386652999849108 23.180761005863896 23 21.27252293267705 30.232214492723458 26.455177868080522 22.040084706518968 24 21.691893045012044 28.23443101465714 31.570192462784807 18.50348347754601 25 20.559385617582326 29.419437752675698 29.343784633155213 20.677391996586763 26 19.952963947698407 33.55330319002253 25.970820997642996 20.52291186463607 27 19.942661803499607 33.12742919877415 27.024033133360735 19.90587586436551 28 18.51909278693813 30.860489195756347 31.260555795476424 19.3598622218291 29 19.27016072385571 28.68319865968063 30.708558584339702 21.33808203212396 30 20.198550415467782 31.33058956361574 29.12265275010016 19.348207270816314 31 24.654227781448856 29.908529446962167 25.69849057978178 19.738752191807194 32 25.70691960685353 29.55601920985676 26.084404738986333 18.652656444303382 33 25.057260149953432 29.97049840524889 24.562913321504944 20.409328123292735 34 20.43211771500523 30.52322405082391 27.86880895766235 21.17584927650851 35 20.886192525222043 29.446858106174524 28.427934420088143 21.239014948515294 36 25.178128235679758 29.557788264921196 25.541096710077895 19.72298678932115 37 20.968921865000286 32.064227105045454 27.423891608955582 19.542959420998685 38 21.860629679540878 32.45112985384483 24.872758112938556 20.815482353675733 39 21.0624736592904 31.620454439027434 26.206105321213574 21.11096658046859 40 23.18086506792651 29.29107719844115 25.737201667074245 21.790856066558096 41 19.604095882784492 27.983589412725753 26.89078166218333 25.521533042306434 42 20.98146134354529 28.574974114561925 25.971705525175214 24.47185901671757 43 21.19182280311978 28.22241184642521 27.006342582716332 23.579422767738677 44 20.691232250914446 29.978042904788417 26.864349898279333 22.466374946017805 45 19.827361038123136 33.31411653910392 24.218415863220823 22.640106559552116 46 22.247844614528102 31.9329007820264 25.076875848756195 20.742378754689298 47 21.109509711591993 29.677563698990078 27.194590853985318 22.01833573543261 48 22.234160453294344 28.245149407106396 28.151233395597135 21.36945674400212 49 21.264614215918375 27.348134427372482 29.147471552033632 22.239779804675507 50 20.612457269515538 30.721306187009933 27.431227984369876 21.23500855910465 51 19.673869495767278 31.310453554499908 25.81202229009381 23.20365465963901 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 993.0 1 1425.5 2 1858.0 3 7242.5 4 12627.0 5 9968.5 6 7310.0 7 7266.5 8 7223.0 9 8413.0 10 9603.0 11 10548.0 12 11493.0 13 11807.0 14 12121.0 15 11543.5 16 10966.0 17 10337.5 18 9709.0 19 9701.5 20 9694.0 21 10561.5 22 11429.0 23 11219.5 24 11010.0 25 13234.5 26 17868.0 27 20277.0 28 24629.5 29 28982.0 30 32280.5 31 35579.0 32 40513.0 33 45447.0 34 52657.5 35 59868.0 36 64239.0 37 68610.0 38 75479.5 39 82349.0 40 99439.0 41 116529.0 42 132169.5 43 147810.0 44 155176.0 45 162542.0 46 165149.5 47 167757.0 48 165738.5 49 163720.0 50 153592.0 51 143464.0 52 129846.5 53 116229.0 54 105222.0 55 94215.0 56 88437.5 57 82660.0 58 75409.5 59 68159.0 60 61540.5 61 54922.0 62 49041.5 63 43161.0 64 36935.0 65 30709.0 66 26122.5 67 21536.0 68 17099.0 69 12662.0 70 10913.5 71 9165.0 72 7936.5 73 6708.0 74 4962.0 75 2622.0 76 2028.0 77 1556.5 78 1085.0 79 812.5 80 540.0 81 378.5 82 217.0 83 164.0 84 111.0 85 96.0 86 81.0 87 62.5 88 44.0 89 32.0 90 20.0 91 15.5 92 11.0 93 14.5 94 18.0 95 11.0 96 4.0 97 2.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1921930.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 24.965497840695548 #Duplication Level Percentage of deduplicated Percentage of total 1 77.86932762060479 19.44046530568623 2 8.315915862284989 4.152219590065636 3 2.9937858428002038 2.242240619818002 4 1.5768055082605565 1.5746293804670308 5 0.9636275409259851 1.2028720646111224 6 0.7037151937435412 1.0541160089921418 7 0.5430591960736567 0.9490420230862715 8 0.4277229340608182 0.8542652789369056 9 0.3704313185743303 0.8323202055594104 >10 4.260251589635435 25.410089790490463 >50 1.542208166502312 27.501683207445172 >100 0.42952722200545657 13.713933438237943 >500 0.002982827258287438 0.47042352539802756 >1k 4.2611817975534826E-4 0.20590337707098197 >5k 2.1305908987767413E-4 0.39579618413463624 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7441 0.38716290395591935 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 2486 0.12934914382937984 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.04448653176754616 0.0 2 0.0 0.0 0.0 0.176749413350122 0.0 3 0.0 0.0 0.0 0.2725905730177478 0.0 4 0.0 0.0 0.0 0.4868543599402684 0.0 5 0.0 0.0 0.0 0.9175672371002066 0.0 6 0.0 0.0 0.0 1.483716888752452 0.0 7 0.0 0.0 0.0 1.7531335688604683 0.0 8 0.0 0.0 0.0 2.2920709911391155 0.0 9 0.0 0.0 0.0 2.496917161395056 0.0 10 0.0 0.0 0.0 2.8769518140619064 0.0 11 0.0 0.0 0.0 3.4141201812761133 0.0 12 0.0 0.0 0.0 3.7934263995046646 0.0 13 0.0 0.0 0.0 3.9873980842174275 0.0 14 0.0 0.0 0.0 4.0708038274026626 0.0 15 0.0 0.0 0.0 4.185948499685212 0.0 16 0.0 0.0 0.0 4.45640580041937 0.0 17 0.0 0.0 0.0 4.764949816070304 0.0 18 0.0 0.0 0.0 5.129895469658104 0.0 19 0.0 0.0 0.0 5.332712429693069 0.0 20 0.0 0.0 0.0 5.540836554921355 0.0 21 0.0 0.0 0.0 5.8348639128376165 0.0 22 0.0 0.0 0.0 6.135030932448112 0.0 23 0.0 0.0 0.0 6.486396486864766 0.0 24 0.0 0.0 0.0 6.751650684468217 0.0 25 0.0 0.0 0.0 6.982408308315079 0.0 26 0.0 0.0 0.0 7.200678484648244 0.0 27 0.0 0.0 0.0 7.421446150484149 0.0 28 0.0 0.0 0.0 7.654701263833751 0.0 29 0.0 0.0 0.0 7.910173627551472 0.0 30 0.0 0.0 0.0 8.181307331692622 0.0 31 0.0 0.0 0.0 8.448694801579663 0.0 32 0.0 0.0 0.0 8.698131565665763 0.0 33 0.0 0.0 0.0 8.952823463913878 0.0 34 0.0 0.0 0.0 9.203717096876577 0.0 35 0.0 0.0 0.0 9.48171889715026 0.0 36 0.0 0.0 0.0 9.74629669134672 0.0 37 0.0 0.0 0.0 10.021748971086357 0.0 38 0.0 0.0 0.0 10.311249629278901 0.0 39 0.0 0.0 0.0 10.6312925028487 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGCGATA 20 7.034473E-4 45.0 22 CGCGTAG 20 7.034473E-4 45.0 2 TATCGGC 20 7.034473E-4 45.0 43 GTCGATC 30 2.1662672E-6 44.999996 27 TCTCACG 285 0.0 42.63158 23 CGACGGT 275 0.0 41.727272 28 CGGTCTA 255 0.0 41.47059 31 TCGTTAG 60 3.6379788E-12 41.249996 1 CGTTTTT 4665 0.0 41.14148 1 CACGACG 270 0.0 40.833332 26 CGACAGG 160 0.0 40.78125 2 TAGTACG 45 1.929402E-8 40.000004 1 AGGGCGA 1355 0.0 39.02214 6 TCACGAC 290 0.0 38.793102 25 TAGGGTA 1485 0.0 38.78788 5 AAGGGTA 1285 0.0 38.346302 5 GACCGAT 955 0.0 38.16754 9 TACGGGA 620 0.0 38.10484 4 AGGGTAC 1210 0.0 37.933887 6 TTCGTAG 125 0.0 37.800003 1 >>END_MODULE