##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547968_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1611164 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.825663929928922 31.0 31.0 31.0 30.0 33.0 2 31.16170545022108 31.0 31.0 33.0 30.0 34.0 3 31.340177039705456 31.0 31.0 34.0 30.0 34.0 4 35.20982718084565 35.0 35.0 37.0 33.0 37.0 5 35.03096581105338 35.0 35.0 37.0 32.0 37.0 6 35.05451524487886 37.0 35.0 37.0 32.0 37.0 7 35.48444664851002 35.0 35.0 37.0 35.0 37.0 8 35.566937319850744 37.0 35.0 37.0 35.0 37.0 9 37.38227269228955 39.0 37.0 39.0 35.0 39.0 10 36.46750237716334 38.0 35.0 39.0 32.0 39.0 11 36.05976983100417 38.0 35.0 39.0 31.0 39.0 12 35.326225014958126 37.0 35.0 39.0 30.0 39.0 13 34.92208241991504 37.0 34.0 39.0 27.0 39.0 14 35.888610966977915 38.0 34.0 40.0 27.0 41.0 15 36.190560365052846 38.0 34.0 40.0 30.0 41.0 16 36.353884520756424 38.0 35.0 40.0 31.0 41.0 17 36.29426985707228 38.0 34.0 40.0 30.0 41.0 18 36.22417829594008 38.0 35.0 40.0 30.0 41.0 19 36.157287526285344 38.0 34.0 40.0 30.0 41.0 20 36.02830251917248 38.0 34.0 40.0 30.0 41.0 21 35.88782644100787 37.0 34.0 40.0 30.0 41.0 22 35.72929385214665 37.0 34.0 40.0 29.0 41.0 23 35.69404107837563 37.0 34.0 40.0 29.0 41.0 24 35.55994920442612 37.0 34.0 40.0 29.0 41.0 25 35.39088509922019 37.0 34.0 40.0 29.0 41.0 26 35.14570707885727 36.0 34.0 40.0 27.0 41.0 27 35.177881332999 37.0 34.0 40.0 27.0 41.0 28 35.236672368548454 37.0 34.0 40.0 28.0 41.0 29 35.23289683731762 36.0 34.0 40.0 28.0 41.0 30 35.138262771511776 36.0 34.0 40.0 27.0 41.0 31 35.01370686038169 36.0 34.0 40.0 27.0 41.0 32 34.86951731791425 36.0 33.0 40.0 27.0 41.0 33 34.73171384166975 36.0 33.0 40.0 26.0 41.0 34 34.56676477379087 36.0 33.0 40.0 25.0 41.0 35 34.439616327077815 36.0 33.0 40.0 24.0 41.0 36 34.31070331760144 36.0 33.0 40.0 24.0 41.0 37 34.23809990789268 36.0 33.0 40.0 24.0 41.0 38 34.19197983569643 36.0 33.0 40.0 24.0 41.0 39 34.164237160214604 36.0 33.0 40.0 23.0 41.0 40 33.94819335585949 36.0 33.0 40.0 23.0 41.0 41 33.89069703642832 36.0 33.0 40.0 23.0 41.0 42 33.84421201069537 35.0 33.0 40.0 23.0 41.0 43 33.777073593997876 35.0 33.0 40.0 23.0 41.0 44 33.58225605835284 35.0 32.0 40.0 23.0 41.0 45 33.440317062695044 35.0 32.0 40.0 23.0 41.0 46 33.39169941731568 35.0 32.0 39.0 23.0 41.0 47 33.33591366242046 35.0 32.0 39.0 22.0 41.0 48 33.25755913116232 35.0 32.0 39.0 22.0 41.0 49 33.12499162096472 35.0 32.0 39.0 22.0 41.0 50 32.97887490038258 35.0 31.0 39.0 21.0 41.0 51 32.62790628390406 35.0 31.0 39.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 4.0 12 1.0 13 7.0 14 39.0 15 97.0 16 283.0 17 612.0 18 1264.0 19 2358.0 20 3968.0 21 6224.0 22 9052.0 23 13015.0 24 18362.0 25 23973.0 26 30389.0 27 35974.0 28 41333.0 29 48858.0 30 57471.0 31 68695.0 32 83141.0 33 104590.0 34 158757.0 35 182700.0 36 134085.0 37 153979.0 38 199964.0 39 231942.0 40 27.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.828479285783445 25.323679029571167 30.472565176481105 12.375276508164283 2 29.50556243808824 27.827024436990893 28.98165549875742 13.685757626163445 3 28.805323356281548 26.52206727558461 30.902192452165018 13.770416915968827 4 25.887495003612294 28.934732901182002 29.74532698099014 15.432445114215563 5 23.58133622647974 33.061376743770346 28.919216169179553 14.43807086057037 6 21.427800025323307 42.420821219937885 25.64183410254946 10.509544652189348 7 90.4004806462905 3.6399770600634076 4.711872906792853 1.2476693868532316 8 91.0716724057886 2.944020596289391 4.331092303452659 1.65321469446934 9 87.10137515485698 5.285060986963462 5.689178755235345 1.924385102944207 10 45.7540635217768 29.90719752923973 12.347780859055938 11.990958089927531 11 39.26993155259179 24.514636622963273 21.147443711502987 15.067988112941947 12 37.375090307380255 23.486994495904824 22.843856987867156 16.294058208847765 13 24.199212494817413 33.90319048836742 24.17395125511742 17.723645761697753 14 18.653284209428712 37.48681077779791 25.88482612570787 17.9750788870655 15 18.091640577867928 27.237202420113654 37.65631555819271 17.014841443825706 16 20.666797420995007 24.70350628489713 37.3203472768756 17.30934901723226 17 20.959380919633258 25.158953402633127 25.476115404763267 28.40555027297035 18 23.406493690276097 27.505579816828078 29.724224225466806 19.363702267429016 19 27.464677711269616 29.015668175306796 23.681698449071604 19.837955664351984 20 29.097782721063776 28.525711845597346 23.766295671948974 18.6102097613899 21 24.747573803784096 29.974416012274357 26.586678947642824 18.691331236298726 22 24.25463826153017 26.836125931314253 25.43800631096524 23.471229496190332 23 22.30561258816607 31.312578980165895 24.705368292737425 21.676440138930612 24 22.340866603275643 27.70363538410739 32.11777323723718 17.837724775379787 25 21.09083867315804 29.153891223984647 28.90332703560904 20.851943067248275 26 19.8684305260048 34.176098770826556 24.58557912167849 21.36989158149015 27 19.643934447393313 33.825855096067194 26.952625555188668 19.577584901350825 28 17.485370825068085 32.08363642683178 31.36937021929487 19.061622528805263 29 19.42322445139042 28.59646814352853 30.858062866350046 21.122244538731007 30 21.084383712645018 31.433981891353085 28.410143225643075 19.07149117035882 31 26.67046930045607 29.696294107862393 24.383675404862572 19.24956118681897 32 27.817466130077385 29.44914360052732 24.661735242346527 18.071655027048767 33 26.177161356634087 29.87616406523482 23.85021015861824 20.09646441951285 34 20.15803481209858 30.229200751754632 27.665526290309366 21.94723814583742 35 21.253205756831704 28.790737628199242 28.571144836900526 21.384911778068528 36 27.50601428532415 29.635840919980833 24.76309053578655 18.095054258908466 37 21.660488938432092 32.72658773408542 26.649801013428803 18.96312231405369 38 21.61095952988026 33.40553785958475 23.589529060977032 21.39397354955796 39 21.329734279067804 31.861374757628646 25.73108634502757 21.07780461827598 40 24.300257453617384 28.36483436819591 25.306672691296477 22.028235486890225 41 19.056160639140398 27.582604874488258 27.1014620485562 26.259772437815144 42 22.587706775970666 28.855038965617403 24.350035129881253 24.207219128530678 43 22.086764600003477 28.752938869041266 25.33857509229352 23.82172143866174 44 21.204048749847935 30.070681817617572 26.44771109582885 22.277558336705635 45 19.98114406727062 34.582761283146844 22.69135854574705 22.74473610383549 46 22.494544317027938 32.64751446780092 24.698230596016295 20.159710619154847 47 21.544237582269712 30.137527899084137 26.25530361899844 22.06293089964771 48 22.713019903622474 27.94488953328153 28.81258518685869 20.529505376237303 49 22.066654915328296 27.219699546414887 28.802778612233144 21.91086692602367 50 20.53037431322944 31.55780541273266 26.89422057593144 21.017599698106462 51 19.43464476614423 32.33420061520739 24.855942660089227 23.375211958559152 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1058.0 1 1503.0 2 1948.0 3 6017.5 4 10087.0 5 7920.5 6 5754.0 7 5907.0 8 6060.0 9 7484.0 10 8908.0 11 9981.5 12 11055.0 13 11409.0 14 11763.0 15 11063.5 16 10364.0 17 10038.0 18 9712.0 19 9551.5 20 9391.0 21 9283.5 22 9176.0 23 10001.5 24 10827.0 25 11214.5 26 12899.5 27 14197.0 28 16881.0 29 19565.0 30 23241.0 31 26917.0 32 30657.5 33 34398.0 34 38525.5 35 42653.0 36 46207.0 37 49761.0 38 56532.5 39 63304.0 40 80708.0 41 98112.0 42 111162.0 43 124212.0 44 126998.0 45 129784.0 46 133445.5 47 137107.0 48 132180.5 49 127254.0 50 121724.0 51 116194.0 52 107061.5 53 97929.0 54 90785.5 55 83642.0 56 78131.0 57 72620.0 58 69911.5 59 67203.0 60 61845.5 61 56488.0 62 51409.0 63 46330.0 64 38538.0 65 30746.0 66 25582.0 67 20418.0 68 16372.5 69 12327.0 70 10856.5 71 9386.0 72 7405.5 73 5425.0 74 4378.0 75 2520.5 76 1710.0 77 1430.0 78 1150.0 79 829.5 80 509.0 81 462.0 82 415.0 83 313.0 84 211.0 85 142.5 86 74.0 87 56.0 88 38.0 89 32.0 90 26.0 91 20.0 92 14.0 93 9.5 94 5.0 95 4.5 96 4.0 97 2.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1611164.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 21.99217748559442 #Duplication Level Percentage of deduplicated Percentage of total 1 79.91380922357614 17.57478675994819 2 7.388522137383453 3.2497938040316074 3 2.6330861656571116 1.7372189486998342 4 1.2713748136655176 1.1184120221138638 5 0.809009923218749 0.8895944909516921 6 0.5685949855891976 0.7502785104297982 7 0.4084627846139807 0.6288090238843552 8 0.3301037284060516 0.5807759827009875 9 0.26110640119945155 0.5168068486022847 >10 3.729484984437934 21.00952991274357 >50 2.0041053066828027 31.84553122745993 >100 0.6794592604470034 19.143302188453106 >500 0.0023042280981097995 0.34275298593912734 >1k 2.8802851226372494E-4 0.23088793822733678 >5k 2.8802851226372494E-4 0.3815193558143345 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6023 0.37382910740309494 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 3645 0.22623395259576307 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 6.206692800981155E-5 0.0 0.0 0.025943975908101224 0.0 2 6.206692800981155E-5 0.0 0.0 0.11103773420955285 0.0 3 6.206692800981155E-5 0.0 0.0 0.1726701937232957 0.0 4 6.206692800981155E-5 0.0 0.0 0.32833404917190306 0.0 5 6.206692800981155E-5 0.0 0.0 0.6126626463848497 0.0 6 6.206692800981155E-5 0.0 0.0 0.9811539979791009 0.0 7 6.206692800981155E-5 0.0 0.0 1.159968817575368 0.0 8 6.206692800981155E-5 0.0 0.0 1.5495008577649452 0.0 9 6.206692800981155E-5 0.0 0.0 1.6926271937555706 0.0 10 6.206692800981155E-5 0.0 0.0 1.9468533308837586 0.0 11 6.206692800981155E-5 0.0 0.0 2.3153446824780097 0.0 12 6.206692800981155E-5 0.0 0.0 2.578446390311601 0.0 13 6.206692800981155E-5 0.0 0.0 2.695939085034174 0.0 14 6.206692800981155E-5 0.0 0.0 2.749564910834651 0.0 15 6.206692800981155E-5 0.0 0.0 2.8258451653587096 0.0 16 6.206692800981155E-5 0.0 0.0 2.994356874905348 0.0 17 6.206692800981155E-5 0.0 0.0 3.1798749227266745 0.0 18 6.206692800981155E-5 0.0 0.0 3.3971712376890246 0.0 19 6.206692800981155E-5 0.0 0.0 3.5217395622047167 0.0 20 6.206692800981155E-5 0.0 0.0 3.6468664890724964 0.0 21 6.206692800981155E-5 0.0 0.0 3.8185436119476353 0.0 22 6.206692800981155E-5 0.0 0.0 3.997544632327932 0.0 23 6.206692800981155E-5 0.0 0.0 4.188648703670141 0.0 24 6.206692800981155E-5 0.0 0.0 4.336740393901552 0.0 25 6.206692800981155E-5 0.0 0.0 4.46248799004943 0.0 26 6.206692800981155E-5 0.0 0.0 4.589538991685514 0.0 27 6.206692800981155E-5 0.0 0.0 4.716776194105628 0.0 28 6.206692800981155E-5 0.0 0.0 4.843640994957683 0.0 29 6.206692800981155E-5 0.0 0.0 4.993656759957397 0.0 30 6.206692800981155E-5 0.0 0.0 5.168933764657105 0.0 31 6.206692800981155E-5 0.0 0.0 5.332976655387037 0.0 32 6.206692800981155E-5 0.0 0.0 5.48007527477029 0.0 33 6.206692800981155E-5 0.0 0.0 5.638966610475408 0.0 34 6.206692800981155E-5 0.0 0.0 5.804809442117624 0.0 35 6.206692800981155E-5 0.0 0.0 6.001871938548776 0.0 36 6.206692800981155E-5 0.0 0.0 6.175224868480179 0.0 37 6.206692800981155E-5 0.0 0.0 6.357205101404947 0.0 38 6.206692800981155E-5 0.0 0.0 6.55054358215551 0.0 39 6.206692800981155E-5 0.0 0.0 6.79068052662547 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCGGCTA 45 3.8562575E-10 45.000004 19 CGACATA 20 7.034131E-4 45.000004 44 GTCGTTG 20 7.034131E-4 45.000004 1 CGGATAC 25 3.8915066E-5 45.0 19 TATCCGT 25 3.8915066E-5 45.0 14 ATACGCA 30 2.1660471E-6 44.999996 13 CGATATA 30 2.1660471E-6 44.999996 10 AATACGC 30 2.1660471E-6 44.999996 12 CGGTCTA 250 0.0 43.199997 31 CGACGGT 270 0.0 42.500004 28 TCGATAG 80 0.0 42.187504 1 TATTGCG 115 0.0 41.08696 1 TCTCACG 280 0.0 40.98214 23 ACGGTCT 270 0.0 40.833336 30 CGTTTTT 3250 0.0 40.776924 1 CGTAAGG 250 0.0 40.499996 2 ACGTTAG 45 1.9292202E-8 40.000004 1 TCACGAC 290 0.0 39.568966 25 CACGACG 290 0.0 39.568966 26 TAATGCG 80 0.0 39.375004 1 >>END_MODULE