##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547967_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2066142 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.865457456457495 31.0 31.0 31.0 30.0 33.0 2 31.151814831700822 31.0 31.0 33.0 30.0 34.0 3 31.097837418725334 31.0 31.0 34.0 28.0 34.0 4 35.11443405148339 35.0 35.0 37.0 32.0 37.0 5 35.0503493951529 35.0 35.0 37.0 32.0 37.0 6 35.12510369568016 37.0 35.0 37.0 32.0 37.0 7 35.56371536903078 36.0 35.0 37.0 35.0 37.0 8 35.664778606697894 37.0 35.0 37.0 35.0 37.0 9 37.48232744893623 39.0 37.0 39.0 35.0 39.0 10 36.64834314388847 39.0 37.0 39.0 32.0 39.0 11 36.21680746047464 38.0 35.0 39.0 31.0 39.0 12 35.948192815401846 38.0 35.0 39.0 31.0 39.0 13 35.85307011812354 38.0 35.0 39.0 30.0 39.0 14 36.90263253929304 39.0 35.0 41.0 31.0 41.0 15 37.01558121368231 39.0 35.0 41.0 31.0 41.0 16 37.07370112993202 39.0 35.0 41.0 31.0 41.0 17 36.98773317613213 39.0 35.0 41.0 31.0 41.0 18 36.815800656489245 39.0 35.0 40.0 31.0 41.0 19 36.707237934275575 38.0 35.0 40.0 31.0 41.0 20 36.5083479257476 38.0 35.0 40.0 30.0 41.0 21 36.40317025644897 38.0 35.0 40.0 30.0 41.0 22 36.30139215988059 38.0 35.0 40.0 30.0 41.0 23 36.21587480434549 38.0 34.0 40.0 30.0 41.0 24 36.100490188960876 38.0 34.0 40.0 30.0 41.0 25 35.93930959246751 38.0 34.0 40.0 30.0 41.0 26 35.71856387411901 38.0 34.0 40.0 29.0 41.0 27 35.77589633239148 38.0 34.0 40.0 29.0 41.0 28 35.76884889809123 38.0 34.0 40.0 29.0 41.0 29 35.715808013195605 38.0 34.0 40.0 29.0 41.0 30 35.600473733170325 38.0 34.0 40.0 29.0 41.0 31 35.46311628145597 38.0 34.0 40.0 28.0 41.0 32 35.250075745035915 38.0 34.0 40.0 27.0 41.0 33 34.971086208014746 38.0 33.0 40.0 25.0 41.0 34 34.625502022610256 38.0 33.0 40.0 24.0 41.0 35 34.3355916485895 37.0 33.0 40.0 23.0 41.0 36 34.24229360808695 37.0 33.0 40.0 22.0 41.0 37 34.180926577166524 37.0 33.0 40.0 22.0 41.0 38 34.075053408720215 37.0 33.0 40.0 21.0 41.0 39 34.009927197646626 37.0 33.0 40.0 21.0 41.0 40 33.861084572115566 37.0 33.0 40.0 20.0 41.0 41 33.77119530022622 37.0 33.0 40.0 20.0 41.0 42 33.726140797679925 37.0 33.0 40.0 19.0 41.0 43 33.67950315128389 37.0 33.0 40.0 19.0 41.0 44 33.4938450503402 37.0 32.0 40.0 18.0 41.0 45 33.36171328011337 36.0 32.0 40.0 18.0 41.0 46 33.32143821673438 36.0 32.0 40.0 18.0 41.0 47 33.2729275141786 36.0 32.0 40.0 18.0 41.0 48 33.196014117132314 36.0 32.0 40.0 18.0 41.0 49 33.06062264839493 36.0 31.0 40.0 18.0 41.0 50 32.98393721244716 36.0 31.0 40.0 18.0 41.0 51 32.696775439442206 35.0 31.0 39.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 5.0 12 4.0 13 10.0 14 28.0 15 98.0 16 249.0 17 667.0 18 1407.0 19 2719.0 20 4537.0 21 7493.0 22 11323.0 23 16256.0 24 24361.0 25 36355.0 26 47508.0 27 52481.0 28 55103.0 29 58641.0 30 66520.0 31 77450.0 32 92858.0 33 114197.0 34 157834.0 35 181384.0 36 182499.0 37 218973.0 38 296306.0 39 358837.0 40 39.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.09123187080075 22.978817525610534 27.766532987568134 18.16341761602058 2 34.409106440893225 25.071461690435605 27.72674869394262 12.792683174728554 3 27.91274752654948 25.26452683310247 34.087250537475164 12.73547510287289 4 24.160004491462832 27.596070357216497 34.17417583109002 14.06974932023065 5 22.09354439336696 31.828112491784204 32.736956124022456 13.341386990826381 6 20.90809828172507 40.34098333996405 29.233276318859012 9.517642059451866 7 86.79635765595975 2.512412022019784 9.661533428002528 1.029696894017933 8 87.3616624607602 2.0775435570256064 9.404726296643696 1.1560676855704979 9 82.58033571748699 5.056525640541647 10.562826756341046 1.8003118856303197 10 37.1629829895525 38.265859752137075 15.542978168973864 9.02817908933655 11 25.751424635867238 25.725676163593793 31.680252373747784 16.84264682679119 12 26.20802442426513 23.576646716440592 32.45517491053374 17.76015394876054 13 23.57040319590812 25.453816823819466 32.880605495653256 18.095174484619157 14 18.842799768844543 28.577464666029726 33.32050749658058 19.25922806854514 15 18.52699378842306 27.712519275054664 36.84678981405924 16.913697122463027 16 23.46629612098297 26.636358972422997 34.47580079200752 15.42154411458651 17 22.30848605758946 26.378196658312937 32.40600113641754 18.907316147680074 18 22.419272247502832 26.81708227217684 33.15677238060114 17.606873099719188 19 24.022066247140806 28.19370595051066 30.371436232359635 17.412791569988897 20 25.18423225509186 28.417214305696316 30.71647544070059 15.682077998511234 21 24.59947089793441 26.784073892307497 32.22842379662192 16.388031413136172 22 23.47321723289106 24.780678191527976 32.880266699965446 18.86583787561552 23 20.642821258171026 27.72248954815303 32.975565087007574 18.659124106668372 24 20.52008042041641 27.339505222777525 34.377017649319356 17.763396707486706 25 21.58055932264094 28.222842379662193 31.720811057516862 18.475787240180008 26 20.393951625783707 30.142652344320965 30.489627528020826 18.973768501874506 27 19.24979018867048 29.462011807513715 32.725775866324774 18.562422137491033 28 18.517362311012505 29.430600607315473 33.58781729426148 18.464219787410546 29 19.8883716608055 28.456030611642376 33.16848503152252 18.487112696029605 30 21.238278879186424 27.493318465042577 33.00358833032773 18.264814325443265 31 22.34681836969579 28.382995941227662 31.103960908785556 18.166224780290996 32 23.131420783276273 28.386964690713416 30.826729237390264 17.654885288620044 33 22.301806942601235 28.99350577065855 30.35667442024798 18.348012866492237 34 20.619541154480185 29.725740050780637 31.442514599674176 18.212204195065006 35 20.379770606279724 30.247533809389676 30.706021173762498 18.666674410568103 36 21.5696694612471 31.6773968100934 28.37984998126944 18.373083747390062 37 21.306086416132093 31.853812564673678 28.607617482244684 18.23248353694954 38 21.342095557807742 31.434722298854577 28.196900309852857 19.026281833484823 39 20.849777024038037 30.748661031042396 28.31078406034048 20.090777884579087 40 22.168757036060445 29.409401677135456 29.034451649499402 19.387389637304697 41 19.31798492068793 30.15746255581659 29.365793832176102 21.158758691319377 42 20.47957013603131 30.53889810090497 28.534437613678055 20.447094149385666 43 20.973679447008 29.740840658580098 28.71322493807299 20.572254956338913 44 20.395016412231104 30.597074160440087 28.673343845679533 20.33456558164928 45 20.352086158647374 30.80795027640888 28.231312271857405 20.608651293086343 46 20.9207789203259 30.796382823639423 28.14937211479172 20.133466141242952 47 19.99243033634668 30.602543290828994 29.542499983060218 19.862526389764113 48 20.725923000452052 29.502570491282786 29.86348469756677 19.908021810698393 49 20.79406933308553 29.3336082418343 29.460656624762482 20.411665800317692 50 19.70469599862933 30.227399665657057 29.87379376635294 20.194110569360674 51 19.10265606139365 30.507293303170833 29.4956493793747 20.894401256060814 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 973.0 1 1595.5 2 2218.0 3 22978.5 4 43739.0 5 32966.0 6 22193.0 7 20484.0 8 18775.0 9 19572.0 10 20369.0 11 21425.5 12 22482.0 13 22747.0 14 23012.0 15 22093.0 16 21174.0 17 19714.0 18 18254.0 19 17327.0 20 16400.0 21 16707.5 22 17015.0 23 17670.0 24 18325.0 25 20198.0 26 25572.0 27 29073.0 28 33612.0 29 38151.0 30 43363.0 31 48575.0 32 54998.0 33 61421.0 34 67480.0 35 73539.0 36 79545.0 37 85551.0 38 91896.5 39 98242.0 40 105778.0 41 113314.0 42 120555.0 43 127796.0 44 131009.0 45 134222.0 46 137150.0 47 140078.0 48 137379.5 49 134681.0 50 133426.5 51 132172.0 52 124772.0 53 117372.0 54 109589.5 55 101807.0 56 95223.5 57 88640.0 58 83246.5 59 77853.0 60 71512.0 61 65171.0 62 56502.5 63 47834.0 64 39512.5 65 31191.0 66 25619.0 67 20047.0 68 16360.5 69 12674.0 70 10138.5 71 7603.0 72 6355.0 73 5107.0 74 4216.0 75 2646.0 76 1967.0 77 1427.5 78 888.0 79 657.5 80 427.0 81 314.5 82 202.0 83 160.0 84 118.0 85 80.5 86 43.0 87 36.0 88 29.0 89 22.0 90 15.0 91 10.5 92 6.0 93 3.0 94 0.0 95 3.0 96 6.0 97 4.0 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2066142.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 27.03932004534867 #Duplication Level Percentage of deduplicated Percentage of total 1 70.56806737693987 19.08112558786806 2 7.632962051610841 4.127802076150135 3 3.542360427523568 2.873490519473637 4 2.2445237634071127 2.4276158555262155 5 1.603503639014649 2.1678824044599168 6 1.279776854726371 2.0762577576945622 7 1.0426172327726502 1.9734162729214837 8 0.9687383817644523 2.095522171579375 9 0.8387808224117953 2.0412056794583973 >10 10.100587588848727 55.86614944546543 >50 0.15576959082178637 2.588861317413997 >100 0.02030060403658951 0.9678506532609117 >500 0.0014630299066325278 0.25945978109432727 >1k 3.6575747665813194E-4 0.169956788187765 >5k 0.0 0.0 >10k+ 1.8287873832906597E-4 1.2834036894458107 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 25954 1.2561576116259192 No Hit CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2365 0.11446454309529548 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.8399383972640794E-5 0.0 0.0 0.014326217655901675 0.0 2 4.8399383972640794E-5 0.0 0.0 0.037945117034550384 0.0 3 4.8399383972640794E-5 0.0 0.0 0.07603543222101869 0.0 4 4.8399383972640794E-5 0.0 0.0 0.11504533570296717 0.0 5 4.8399383972640794E-5 0.0 0.0 0.2385605636011465 0.0 6 4.8399383972640794E-5 0.0 0.0 0.4993364444457351 0.0 7 4.8399383972640794E-5 0.0 0.0 0.6716382513883363 0.0 8 4.8399383972640794E-5 0.0 0.0 0.9862826465944742 0.0 9 4.8399383972640794E-5 0.0 0.0 1.203644280015604 0.0 10 4.8399383972640794E-5 0.0 0.0 1.4348965366368818 0.0 11 4.8399383972640794E-5 0.0 0.0 1.6196369852604515 0.0 12 4.8399383972640794E-5 0.0 0.0 1.7503153219865817 0.0 13 4.8399383972640794E-5 0.0 0.0 1.8400961792558304 0.0 14 4.8399383972640794E-5 0.0 0.0 1.9072745242098559 0.0 15 4.8399383972640794E-5 0.0 0.0 1.9589166669086635 0.0 16 4.8399383972640794E-5 0.0 0.0 2.0289021761331023 0.0 17 4.8399383972640794E-5 0.0 0.0 2.1042116175945313 0.0 18 4.8399383972640794E-5 0.0 0.0 2.199268007716798 0.0 19 4.8399383972640794E-5 0.0 0.0 2.2738030590346647 0.0 20 4.8399383972640794E-5 0.0 0.0 2.3465473331455438 0.0 21 9.679876794528159E-5 0.0 0.0 2.4233571555101245 0.0 22 9.679876794528159E-5 0.0 0.0 2.52480226431678 0.0 23 9.679876794528159E-5 0.0 0.0 2.640670389547282 0.0 24 9.679876794528159E-5 0.0 0.0 2.733452008622834 0.0 25 9.679876794528159E-5 0.0 0.0 2.8217808843729038 0.0 26 9.679876794528159E-5 0.0 0.0 2.9131105219292768 0.0 27 9.679876794528159E-5 0.0 0.0 3.0106836800181207 0.0 28 9.679876794528159E-5 0.0 0.0 3.1106284079216238 0.0 29 9.679876794528159E-5 0.0 0.0 3.2206402076914364 0.0 30 9.679876794528159E-5 0.0 0.0 3.366806347288812 0.0 31 9.679876794528159E-5 0.0 0.0 3.4882404016761677 0.0 32 9.679876794528159E-5 0.0 0.0 3.6220162989765465 0.0 33 9.679876794528159E-5 0.0 0.0 3.744176344123492 0.0 34 9.679876794528159E-5 0.0 0.0 3.882792179821135 0.0 35 9.679876794528159E-5 0.0 0.0 4.025763960076316 0.0 36 9.679876794528159E-5 0.0 0.0 4.171494505217938 0.0 37 9.679876794528159E-5 0.0 0.0 4.329179698200801 0.0 38 9.679876794528159E-5 0.0 0.0 4.51096778440204 0.0 39 9.679876794528159E-5 0.0 0.0 4.7795359660662236 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TACCCGC 20 7.034596E-4 45.0 29 CGTTTTT 14615 0.0 42.61375 1 CGACGGT 75 0.0 39.000004 28 GGCGATA 670 0.0 38.955223 8 TAGGGAT 3825 0.0 38.705883 5 TACGGGA 905 0.0 38.53591 4 GCGATCG 205 0.0 38.414635 9 CACGACC 335 0.0 38.28358 27 TAAGGGA 3450 0.0 38.086956 4 TAGGGAC 2410 0.0 37.904564 5 TCGCGTA 30 1.14023715E-4 37.499996 30 TTAGGGA 3315 0.0 37.398193 4 AGGGCGA 1755 0.0 37.30769 6 GGGCGAT 3460 0.0 37.131504 7 AAGGGAT 4200 0.0 37.125 5 CACGGGA 535 0.0 37.009346 4 TAGGGCG 610 0.0 36.885242 5 ACGGGAT 1155 0.0 36.818184 5 AGGGATT 4520 0.0 36.686947 6 ACGGGAC 695 0.0 36.58273 5 >>END_MODULE