##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547966_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1952187 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.845095270074026 31.0 31.0 31.0 30.0 33.0 2 31.192176774048797 31.0 31.0 33.0 30.0 34.0 3 31.369608034476204 31.0 31.0 34.0 30.0 34.0 4 35.25386092623299 37.0 35.0 37.0 33.0 37.0 5 35.070648457345534 35.0 35.0 37.0 32.0 37.0 6 35.10011950699395 37.0 35.0 37.0 32.0 37.0 7 35.49827245033391 35.0 35.0 37.0 35.0 37.0 8 35.57562159772604 37.0 35.0 37.0 35.0 37.0 9 37.38486272063076 39.0 37.0 39.0 35.0 39.0 10 36.495772689808916 38.0 35.0 39.0 32.0 39.0 11 36.09686367135935 38.0 35.0 39.0 31.0 39.0 12 35.47235638798947 37.0 35.0 39.0 30.0 39.0 13 35.14096958949117 37.0 34.0 39.0 29.0 39.0 14 36.06513003108821 38.0 34.0 40.0 29.0 41.0 15 36.336427299229015 38.0 35.0 40.0 30.0 41.0 16 36.48142775256674 38.0 35.0 40.0 31.0 41.0 17 36.42848251729983 38.0 35.0 40.0 31.0 41.0 18 36.34195853163657 38.0 35.0 40.0 30.0 41.0 19 36.2798533132328 38.0 35.0 40.0 30.0 41.0 20 36.14483602236876 38.0 34.0 40.0 30.0 41.0 21 36.02369854937053 38.0 34.0 40.0 30.0 41.0 22 35.88859981139102 38.0 34.0 40.0 29.0 41.0 23 35.82681577123503 38.0 34.0 40.0 29.0 41.0 24 35.71094674844162 37.0 34.0 40.0 29.0 41.0 25 35.52698383915065 37.0 34.0 40.0 29.0 41.0 26 35.26941015384284 37.0 34.0 40.0 27.0 41.0 27 35.37340224066649 37.0 34.0 40.0 28.0 41.0 28 35.392688815159616 37.0 34.0 40.0 28.0 41.0 29 35.381589468631844 37.0 34.0 40.0 28.0 41.0 30 35.292995496845336 37.0 34.0 40.0 27.0 41.0 31 35.16640618957098 37.0 34.0 40.0 27.0 41.0 32 35.04321409782977 37.0 34.0 40.0 27.0 41.0 33 34.918291126823405 37.0 33.0 40.0 26.0 41.0 34 34.747682983238796 37.0 33.0 40.0 25.0 41.0 35 34.61453539030841 37.0 33.0 40.0 24.0 41.0 36 34.51042804813268 37.0 33.0 40.0 24.0 41.0 37 34.442693758333604 37.0 33.0 40.0 24.0 41.0 38 34.370217094981165 37.0 33.0 40.0 24.0 41.0 39 34.30604854965226 36.0 33.0 40.0 23.0 41.0 40 34.11432203984557 36.0 33.0 40.0 23.0 41.0 41 34.04846871739234 36.0 33.0 40.0 23.0 41.0 42 34.003881800257865 36.0 33.0 40.0 23.0 41.0 43 33.94308229693159 36.0 33.0 40.0 23.0 41.0 44 33.79717209468151 36.0 33.0 40.0 23.0 41.0 45 33.6729524374458 35.0 32.0 40.0 23.0 41.0 46 33.61552914756629 35.0 32.0 40.0 23.0 41.0 47 33.54111055959291 35.0 32.0 40.0 23.0 41.0 48 33.433761724670845 35.0 32.0 39.0 22.0 41.0 49 33.29769074376584 35.0 32.0 39.0 22.0 41.0 50 33.192076886077 35.0 32.0 39.0 21.0 41.0 51 32.85363646003175 35.0 31.0 39.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 1.0 11 4.0 12 5.0 13 11.0 14 38.0 15 141.0 16 327.0 17 771.0 18 1672.0 19 2961.0 20 4879.0 21 7440.0 22 11111.0 23 15493.0 24 21520.0 25 28517.0 26 35779.0 27 42280.0 28 48388.0 29 56732.0 30 67225.0 31 80615.0 32 97428.0 33 121733.0 34 181843.0 35 205034.0 36 161551.0 37 197573.0 38 258777.0 39 302307.0 40 30.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.11757531425012 25.165365817926254 29.349903467239564 12.367155400584062 2 30.571302851622306 26.525225298601008 28.83530112637775 14.068170723398937 3 28.922280498743202 26.71383427919559 30.489855736156425 13.874029485904781 4 25.811051912547313 29.10043966074971 29.94298189671379 15.145526529989187 5 23.391918909407757 33.48429223225029 28.79309205521807 14.330696803123882 6 22.099266105142593 42.617228779824885 25.271554415637436 10.01195069939509 7 90.66493117718744 3.3692469010397055 4.7677297308096 1.1980921909632634 8 91.17902127204003 2.7799590920337036 4.540855973326326 1.5001636625999455 9 86.31698705093314 5.578307815798384 5.9791403180125675 2.1255648152559155 10 44.85922711297637 31.2679574241607 12.501671202605078 11.371144260257854 11 37.051727114256984 25.140316988075423 22.128976373677318 15.678979523990275 12 34.60959426530348 22.980636588605496 25.374259740485925 17.035509405605097 13 25.458729107406207 30.128466176652136 26.654618640529826 17.75818607541183 14 19.997674403118143 33.525937832799826 27.916280561237215 18.560107202844808 15 18.97728035275309 26.811519593153733 37.26589717071162 16.94530288338156 16 22.824555229596342 24.60404664102363 34.96816647175706 17.603231657622963 17 23.323277944172357 24.23225848753219 26.859004798208368 25.585458770087087 18 24.543704061137586 25.993770064035875 29.872599295047042 19.589926579779497 19 27.6307034110974 27.25773709178475 25.467744637168465 19.64381485994938 20 29.69546462505897 27.476619811524206 24.9247638673959 17.903151696020924 21 26.561441091452814 27.4009610759625 27.5604232586325 18.477174573952187 22 25.73523950318284 24.421635837140602 27.48107635180441 22.362048307872147 23 22.670420405422227 28.6523780764855 26.435479797785767 22.241721720306508 24 23.008605220708876 26.967959524369334 31.042722853906923 18.980712401014863 25 21.880690733008674 27.413101306380998 29.773889489070466 20.93231847153987 26 20.89543675887607 32.14896933541715 26.00821540149586 20.947378504210917 27 21.07047122022634 31.290188900960818 27.96443168610384 19.674908192708997 28 19.41130639636469 29.724662647584477 31.7384041590278 19.12562679702303 29 21.143722399544714 27.487223303915044 30.604086596212348 20.764967700327887 30 22.381206308616953 29.05423507071812 28.635115385974807 19.92944323469012 31 26.342865719318898 27.742782837914604 26.032034840924563 19.882316601841936 32 27.514064994798144 27.78458211226691 25.905919873454746 18.795433019480203 33 26.68356054005072 28.091673594793942 25.246351911983844 19.978413953171493 34 21.459163492022025 28.847134009190718 27.99552501886346 21.698177479923796 35 21.80083158017137 28.568728303179974 28.607607775279725 21.022832341368936 36 26.778684623962768 27.958182284791366 25.281287089812604 19.981846001433265 37 22.266514427152725 30.909999912918178 27.376424492120886 19.447061167808208 38 22.897960082717486 31.333576137941705 24.302077618588793 21.46638616075202 39 22.301091032775037 29.235109136573495 26.784985249876165 21.678814580775306 40 24.184158587266484 27.181719784016593 26.301168894168438 22.332952734548485 41 20.54900478284099 26.718393268677644 26.993162028022933 25.73943992045844 42 22.419112513299186 27.121018631924095 26.198668467723635 24.261200387053083 43 22.307699006293966 27.331961538520645 26.755889676552503 23.604449778632887 44 21.0678075409784 28.909371899310877 27.78068904259684 22.242131517113883 45 20.840165414481294 31.127397119230892 25.17094929942675 22.86148816686106 46 22.848118546020437 29.977660951537942 25.723970090980014 21.450250411461607 47 21.817172227865466 28.80840821089373 27.166967098951073 22.20745246228973 48 22.82978013889038 27.052992361899758 29.383558030045275 20.733669469164585 49 22.62032274572057 26.38333315404723 28.954142200516653 22.04220189971555 50 20.964128948712393 29.978890341960067 27.2627571026751 21.794223606652434 51 20.279614606592503 30.395961042666507 26.130795871502066 23.193628479238924 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 966.0 1 1560.0 2 2154.0 3 7215.5 4 12277.0 5 9659.0 6 7041.0 7 6827.0 8 6613.0 9 7296.5 10 7980.0 11 8365.0 12 8750.0 13 9025.5 14 9301.0 15 9114.5 16 8928.0 17 8969.5 18 9011.0 19 8889.0 20 8767.0 21 9415.5 22 10064.0 23 10699.0 24 11334.0 25 13573.5 26 18698.5 27 21584.0 28 24358.0 29 27132.0 30 32912.5 31 38693.0 32 44326.5 33 49960.0 34 54406.0 35 58852.0 36 63380.5 37 67909.0 38 74445.5 39 80982.0 40 98714.5 41 116447.0 42 127810.5 43 139174.0 44 143709.0 45 148244.0 46 148829.0 47 149414.0 48 145027.0 49 140640.0 50 134190.0 51 127740.0 52 121544.0 53 115348.0 54 107131.5 55 98915.0 56 96095.5 57 93276.0 58 87428.0 59 81580.0 60 79187.5 61 76795.0 62 69153.0 63 61511.0 64 53655.0 65 45799.0 66 38532.0 67 31265.0 68 27136.5 69 23008.0 70 18764.0 71 14520.0 72 12226.5 73 9933.0 74 8322.5 75 5210.0 76 3708.0 77 2758.5 78 1809.0 79 1419.0 80 1029.0 81 871.0 82 713.0 83 484.5 84 256.0 85 186.5 86 117.0 87 88.0 88 59.0 89 48.0 90 37.0 91 27.0 92 17.0 93 13.0 94 9.0 95 5.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1952187.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 21.935805477818178 #Duplication Level Percentage of deduplicated Percentage of total 1 79.4835385358661 17.43535440011424 2 6.899894960662234 3.0270950734892934 3 2.471101691293316 1.6261681804835302 4 1.28329868749117 1.1260076151498273 5 0.8551210866605972 0.9378884908483681 6 0.5809917546561916 0.7646713268612689 7 0.4794127280799239 0.7361413042725947 8 0.38261613226699975 0.6714394440067247 9 0.3288657545476818 0.6492541698066462 >10 4.611106082194468 25.853924573071634 >50 2.150790251444765 33.499596734296766 >100 0.47135401901582863 12.981133444488599 >500 0.0014312368655137984 0.19025572085603296 >1k 2.3853947758563306E-4 0.15587783070135372 >5k 2.3853947758563306E-4 0.3451916915531489 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6597 0.3379286922820406 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 2979 0.15259808614646037 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.017877385721757188 0.0 2 0.0 0.0 0.0 0.06741157481327352 0.0 3 0.0 0.0 0.0 0.10562512710104104 0.0 4 0.0 0.0 0.0 0.1909653122369937 0.0 5 0.0 0.0 0.0 0.342743804768703 0.0 6 0.0 0.0 0.0 0.5922076112585526 0.0 7 0.0 0.0 0.0 0.7082313323467475 0.0 8 0.0 0.0 0.0 0.991349701642312 0.0 9 0.0 0.0 0.0 1.1052219894917854 0.0 10 0.0 0.0 0.0 1.2997217991923928 0.0 11 0.0 0.0 0.0 1.5461633542278481 0.0 12 0.0 0.0 0.0 1.7286766073127215 0.0 13 0.0 0.0 0.0 1.8260545736653302 0.0 14 0.0 0.0 0.0 1.8720542652932326 0.0 15 0.0 0.0 0.0 1.9318333745691372 0.0 16 0.0 0.0 0.0 2.0516477161255557 0.0 17 0.0 0.0 0.0 2.1906712830277018 0.0 18 0.0 0.0 0.0 2.3523873481382673 0.0 19 0.0 0.0 0.0 2.4537096087618657 0.0 20 0.0 0.0 0.0 2.5621008643126912 0.0 21 0.0 0.0 0.0 2.70409545806831 0.0 22 0.0 0.0 0.0 2.860176817077462 0.0 23 0.0 0.0 0.0 3.032957395987167 0.0 24 0.0 0.0 0.0 3.167882994815558 0.0 25 0.0 0.0 0.0 3.282933448486236 0.0 26 0.0 0.0 0.0 3.3995206401845723 0.0 27 0.0 0.0 0.0 3.524508666434107 0.0 28 0.0 0.0 0.0 3.6511871045140656 0.0 29 0.0 0.0 0.0 3.793437821274294 0.0 30 0.0 0.0 0.0 3.967908812014423 0.0 31 0.0 0.0 0.0 4.121787513183932 0.0 32 0.0 0.0 0.0 4.271056000270466 0.0 33 0.0 0.0 0.0 4.426830011674086 0.0 34 0.0 0.0 0.0 4.588546076784652 0.0 35 0.0 0.0 0.0 4.768241976818819 0.0 36 0.0 0.0 0.0 4.93615621864094 0.0 37 0.0 0.0 0.0 5.122767439799568 0.0 38 0.0 0.0 0.0 5.336732597850514 0.0 39 0.0 0.0 0.0 5.6364989624457085 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGTCTA 165 0.0 43.636364 31 CGTAAGG 310 0.0 42.096775 2 TATAGCG 145 0.0 41.896553 1 GCGATAT 235 0.0 40.212765 9 GGGCGAT 3235 0.0 39.50541 7 CGTACGT 40 3.4598816E-7 39.375 41 AGGGCGA 1685 0.0 38.857567 6 CGTTTTT 4590 0.0 38.67647 1 TATGGGC 705 0.0 38.61702 4 ATAGCGG 440 0.0 38.352272 2 ATAACGC 65 9.094947E-12 38.076927 11 TAGGGAT 2610 0.0 37.75862 5 GGCGATA 755 0.0 37.549667 8 TATTGCG 90 0.0 37.500004 1 ATGGGCG 530 0.0 37.35849 5 ACGGGTA 170 0.0 37.058823 5 ACGGGAT 640 0.0 36.914062 5 ATATACG 55 2.752131E-9 36.81818 1 TAGGGCG 770 0.0 36.81818 5 TGGGCGA 1045 0.0 36.81818 6 >>END_MODULE