##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547965_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1285442 Sequences flagged as poor quality 0 Sequence length 51 %GC 40 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.811305372004337 31.0 31.0 31.0 30.0 33.0 2 31.071799427745475 31.0 31.0 33.0 30.0 34.0 3 30.93009719613954 31.0 31.0 34.0 28.0 34.0 4 35.002241252425236 35.0 35.0 37.0 32.0 37.0 5 34.95955943558714 35.0 35.0 37.0 32.0 37.0 6 35.03997068712552 36.0 35.0 37.0 32.0 37.0 7 35.502625556034424 35.0 35.0 37.0 35.0 37.0 8 35.60044560548045 37.0 35.0 37.0 35.0 37.0 9 37.41210105162271 39.0 37.0 39.0 35.0 39.0 10 36.586001546549745 39.0 35.0 39.0 32.0 39.0 11 36.1532710149505 38.0 35.0 39.0 31.0 39.0 12 35.94257228253006 37.0 35.0 39.0 31.0 39.0 13 35.88906617334738 38.0 35.0 39.0 30.0 39.0 14 37.00383681255163 39.0 36.0 41.0 31.0 41.0 15 37.11291369038821 39.0 36.0 41.0 31.0 41.0 16 37.16806748184671 39.0 35.0 41.0 31.0 41.0 17 37.09110951719331 39.0 35.0 41.0 31.0 41.0 18 36.917618997978906 39.0 35.0 40.0 31.0 41.0 19 36.7607935636147 38.0 35.0 40.0 31.0 41.0 20 36.546307029021925 38.0 35.0 40.0 31.0 41.0 21 36.44289201690936 38.0 35.0 40.0 30.0 41.0 22 36.32243772959029 38.0 35.0 40.0 30.0 41.0 23 36.21882512007543 38.0 35.0 40.0 30.0 41.0 24 36.051500573343645 38.0 34.0 40.0 30.0 41.0 25 35.849861759612644 37.0 34.0 40.0 30.0 41.0 26 35.600704660342515 37.0 34.0 40.0 29.0 41.0 27 35.606432651181464 37.0 34.0 40.0 29.0 41.0 28 35.55703174472283 37.0 34.0 40.0 29.0 41.0 29 35.47270977609258 37.0 34.0 40.0 29.0 41.0 30 35.320546551302975 37.0 34.0 40.0 28.0 41.0 31 35.194475518926566 37.0 34.0 40.0 27.0 41.0 32 34.95352337950681 37.0 33.0 40.0 26.0 41.0 33 34.671110793019054 37.0 33.0 40.0 25.0 41.0 34 34.26024589207448 36.0 33.0 40.0 23.0 41.0 35 33.963468596793945 36.0 33.0 40.0 21.0 41.0 36 33.82560706745228 36.0 33.0 40.0 21.0 41.0 37 33.72294432576499 36.0 33.0 40.0 21.0 41.0 38 33.602248098319485 36.0 33.0 40.0 20.0 41.0 39 33.53548507050493 36.0 33.0 40.0 20.0 41.0 40 33.35444539699185 36.0 33.0 40.0 18.0 41.0 41 33.24198369121283 36.0 32.0 40.0 18.0 41.0 42 33.18383015336359 35.0 32.0 40.0 18.0 41.0 43 33.128810168020024 35.0 32.0 40.0 18.0 41.0 44 32.93004429604758 35.0 32.0 40.0 18.0 41.0 45 32.820715364831706 35.0 31.0 40.0 18.0 41.0 46 32.75040258525861 35.0 31.0 40.0 18.0 41.0 47 32.68958381630598 35.0 31.0 39.0 18.0 41.0 48 32.58268673343488 35.0 31.0 39.0 17.0 41.0 49 32.44390800985187 35.0 31.0 39.0 17.0 41.0 50 32.33012380177402 35.0 31.0 39.0 15.0 41.0 51 32.0656941347801 35.0 31.0 39.0 15.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 8.0 14 12.0 15 50.0 16 168.0 17 380.0 18 880.0 19 1657.0 20 2900.0 21 4635.0 22 7148.0 23 10787.0 24 16162.0 25 23758.0 26 31507.0 27 34537.0 28 34929.0 29 37678.0 30 43098.0 31 50673.0 32 60452.0 33 74663.0 34 100336.0 35 124613.0 36 137794.0 37 136619.0 38 163271.0 39 186705.0 40 21.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.061644165975594 23.86043088680781 26.64958823501955 19.42833671219705 2 35.50545259918378 25.23863387068417 26.577472962607413 12.678440567524635 3 26.660323841915854 25.43156361780617 35.20213280723673 12.705979733041243 4 23.175841461536187 27.12918980397404 35.92670847848444 13.768260256005327 5 21.8531057799574 30.882606916531437 33.84407853485416 13.420208768657007 6 19.8479589121874 39.169406320938634 30.82846211653268 10.154172650341284 7 83.16664618084675 2.9409339355645763 12.300671675579295 1.5917482080093852 8 83.2152675888916 2.905226373496432 11.958065785931998 1.9214402516799667 9 78.375375940727 5.467613474586951 13.33657994681985 2.8204306378661967 10 37.000191373862066 33.35879798544003 18.942900574277175 10.698110066420734 11 24.21338341208705 27.738474392465783 31.26652155445364 16.781620640993523 12 24.13232180059466 25.13306706953717 32.33152487626824 18.40308625359993 13 21.06419426158473 28.368218869462797 33.28598256475205 17.281604304200425 14 17.189573703053114 31.97164866248341 32.45358405902405 18.38519357543942 15 16.65123747318043 31.202419090087304 35.74949317044254 16.39685026628973 16 19.12322765243395 30.572907995848897 34.1259271130086 16.177937238708555 17 18.899413586921852 31.26037580847677 30.933873329173935 18.90633727542744 18 19.237351821396842 31.650513986628724 32.23778280155775 16.87435139041668 19 20.78226788917742 33.39979555670345 28.77842796485567 17.03950858926346 20 22.26603767420078 32.70089198890343 29.044406515424264 15.988663821471524 21 20.956915986874552 32.44315962913924 30.472086644127078 16.12783773985913 22 20.596961978836852 30.398259898151764 30.40673947171479 18.598038651296598 23 18.210623271995157 33.402829532565455 30.24726125332765 18.13928594211174 24 17.966271523724913 32.769350931430594 32.44720493028857 16.81717261455593 25 18.653116982329813 34.35293074288844 29.893452991266816 17.10049928351493 26 18.084363199584267 35.66314154975487 28.8778490200258 17.374646230635065 27 17.468466099598427 34.94766780609316 29.892130488968 17.69173560534042 28 16.835298675475048 34.777531775062585 31.491580328011686 16.895589221450678 29 17.70939490074231 32.64394659580129 31.29919514065979 18.34746336279661 30 17.904891858209083 34.12888329461773 30.87716131883041 17.08906352834278 31 19.09179877427375 34.84777998540579 28.37833212233613 17.68208911798432 32 19.16088007082389 34.50431835897691 28.44889150969083 17.88591006050837 33 18.384571221416447 35.4026085968873 27.81689099936053 18.395929182335728 34 17.051722286964328 35.20547796011022 28.548545947619573 19.19425380530588 35 17.386548751324447 35.55461856699875 27.90713233269179 19.151700348985017 36 18.56528727083758 36.278649678476356 26.100594192503436 19.055468858182635 37 17.706283130627444 36.54416146352772 26.91650031662261 18.833055089222228 38 17.50448483867806 36.70472880145506 26.755388418925165 19.035397940941714 39 17.973039623724755 36.10687996813547 26.31281691433764 19.607263493802133 40 19.68326847885786 35.14775462447936 26.93540432007045 18.233572576592334 41 17.355353255922864 35.22617123137411 27.49241117063236 19.926064342070664 42 18.49783965359775 35.87972074974989 26.5163266798502 19.10611291680216 43 18.69994912255862 35.497906556655224 27.14241482696224 18.659729493823914 44 18.62347737198567 36.11458159916978 26.333743568360145 18.92819746048441 45 17.375346378910912 36.49546226122999 26.030579364918836 20.098611994940264 46 18.74413625818979 36.151222692272384 25.947961868369013 19.156679181168812 47 18.094009686940367 35.82036373480873 27.29092405569446 18.794702522556445 48 18.067248463952478 35.309566670452654 27.566237916607673 19.056946948987196 49 17.80834919039521 34.891111384255375 27.555268926952753 19.74527049839666 50 17.125393444433897 35.354687337118285 28.6215169568133 18.89840226163452 51 16.947633576621893 35.59639408079089 27.381865537301564 20.074106805285652 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 947.0 1 1266.0 2 1585.0 3 19827.0 4 38069.0 5 27270.0 6 16471.0 7 16056.5 8 15642.0 9 19066.5 10 22491.0 11 26336.5 12 30182.0 13 31194.5 14 32207.0 15 30062.5 16 27918.0 17 25312.0 18 22706.0 19 20172.0 20 17638.0 21 16501.0 22 15364.0 23 15003.0 24 14642.0 25 15012.5 26 16696.5 27 18010.0 28 19842.5 29 21675.0 30 24086.0 31 26497.0 32 29806.0 33 33115.0 34 35684.5 35 38254.0 36 40672.0 37 43090.0 38 48119.0 39 53148.0 40 56649.0 41 60150.0 42 65596.0 43 71042.0 44 75264.5 45 79487.0 46 88207.0 47 96927.0 48 92789.5 49 88652.0 50 84057.0 51 79462.0 52 71994.0 53 64526.0 54 58848.5 55 53171.0 56 48653.0 57 44135.0 58 40926.5 59 37718.0 60 34333.0 61 30948.0 62 27058.5 63 23169.0 64 19878.0 65 16587.0 66 14190.0 67 11793.0 68 9844.5 69 7896.0 70 6638.0 71 5380.0 72 4601.0 73 3822.0 74 3157.5 75 2013.0 76 1533.0 77 1178.0 78 823.0 79 571.0 80 319.0 81 254.0 82 189.0 83 143.5 84 98.0 85 66.0 86 34.0 87 31.0 88 28.0 89 19.5 90 11.0 91 6.5 92 2.0 93 5.0 94 8.0 95 5.5 96 3.0 97 2.5 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1285442.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 35.86008436324975 #Duplication Level Percentage of deduplicated Percentage of total 1 69.88832800092904 25.062013381197843 2 9.910965598879637 7.108161249941797 3 4.82105416451658 5.186502271780833 4 2.8583367474277126 4.100007876053387 5 1.8940563614809103 3.3960510455727655 6 1.4209240110941854 3.0572672946962824 7 1.1383910662502645 2.8575959771873025 8 0.9487111417945665 2.7216689264886518 9 0.8051904017351755 2.598677616123212 >10 6.257333541987009 38.49401747450608 >50 0.03928476787469754 0.8882351373017497 >100 0.013895246063354544 0.9310012936417864 >500 0.0017644749834205004 0.429157409102819 >1k 0.001543915610492938 0.9869987667147216 >5k 0.0 0.0 >10k+ 2.2055937292756256E-4 2.1826442796906367 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 27596 2.146810202249499 No Hit CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2443 0.19005135976574594 No Hit CGTTTCTGTCTCTTATACACATCTGACGCTACACCACTCGTATGCCGTCTT 2411 0.18756194367384915 No Hit GAATCTGTCTCTTATACACATCTGACGCTACACCACTCGTATGCCGTCTTC 1918 0.14920937700806414 No Hit CGTTCTGTCTCTTATACACATCTGACGCTACACCACTCGTATGCCGTCTTC 1909 0.14850922873221817 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCTACACCACTCGTATGCCGTCT 1647 0.12812713447981317 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.05531171379183192 0.0 2 0.0 0.0 0.0 0.18810650344395158 0.0 3 0.0 0.0 0.0 0.3352932298773496 0.0 4 0.0 0.0 0.0 0.521377082746635 0.0 5 0.0 0.0 0.0 1.0982992620437173 0.0 6 0.0 0.0 0.0 1.9506908907597542 0.0 7 0.0 0.0 0.0 2.5342255815509374 0.0 8 0.0 0.0 0.0 3.289218805671512 0.0 9 0.0 0.0 0.0 3.7402698838220627 0.0 10 0.0 0.0 0.0 4.266470210246748 0.0 11 0.0 0.0 0.0 4.620589649319067 0.0 12 0.0 0.0 0.0 4.93892373207037 0.0 13 0.0 0.0 0.0 5.13006421137632 0.0 14 0.0 0.0 0.0 5.254379427465417 0.0 15 0.0 0.0 0.0 5.364147118267491 0.0 16 0.0 0.0 0.0 5.511567227459504 0.0 17 0.0 0.0 0.0 5.668400441249002 0.0 18 0.0 0.0 0.0 5.869342996416797 0.0 19 0.0 0.0 0.0 5.991479973425483 0.0 20 0.0 0.0 0.0 6.122252112502936 0.0 21 0.0 0.0 0.0 6.258858820545774 0.0 22 0.0 0.0 0.0 6.409001728588299 0.0 23 0.0 0.0 0.0 6.58349423777969 0.0 24 0.0 0.0 0.0 6.727413605592473 0.0 25 0.0 0.0 0.0 6.862231045819259 0.0 26 0.0 0.0 0.0 6.9916806825978925 0.0 27 0.0 0.0 0.0 7.127276065353396 0.0 28 0.0 0.0 0.0 7.266916749258232 0.0 29 0.0 0.0 0.0 7.414259064197373 0.0 30 0.0 0.0 0.0 7.580583176837228 0.0 31 0.0 0.0 0.0 7.735704917063547 0.0 32 0.0 0.0 0.0 7.905918742346991 0.0 33 0.0 0.0 0.0 8.063296515906591 0.0 34 0.0 0.0 0.0 8.217718107857063 0.0 35 0.0 0.0 0.0 8.388632081416354 0.0 36 0.0 0.0 0.0 8.547954711297749 0.0 37 0.0 0.0 0.0 8.723069574512113 0.0 38 0.0 0.0 0.0 8.897250906692017 0.0 39 0.0 0.0 0.0 9.094770514733453 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATTCACG 30 2.1657033E-6 44.999996 1 CGTTTTT 11330 0.0 43.272285 1 AAATGCG 60 3.6379788E-12 41.249996 1 TTGTACG 55 6.184564E-11 40.909092 1 TGTTACG 45 1.9286745E-8 40.0 1 ACGGGAT 575 0.0 39.52174 5 CGTTCGA 40 3.4586446E-7 39.375 14 GCCGACC 40 3.4586446E-7 39.375 14 TAGGGAT 1685 0.0 38.9911 5 CTTGCGG 110 0.0 38.863636 2 AGGGATC 1205 0.0 38.838173 6 AAGGGCG 420 0.0 38.57143 5 TAGGGAC 1430 0.0 38.54895 5 GGCGATA 345 0.0 38.47826 8 TAGGGCG 410 0.0 38.414635 5 CGGGATC 340 0.0 38.38235 6 TAAGGGA 1670 0.0 38.128742 4 AGGGCGA 1055 0.0 37.96209 6 ATTAGCG 95 0.0 37.894737 1 CGGTTTT 940 0.0 37.57979 1 >>END_MODULE