##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547964_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2255174 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.979019800689436 31.0 31.0 33.0 30.0 33.0 2 31.32533498523839 31.0 31.0 33.0 30.0 34.0 3 31.454586209312453 31.0 31.0 34.0 30.0 34.0 4 35.38744371831176 37.0 35.0 37.0 33.0 37.0 5 35.28026928299102 37.0 35.0 37.0 33.0 37.0 6 35.329781648777434 37.0 35.0 37.0 33.0 37.0 7 35.576817575938705 36.0 35.0 37.0 35.0 37.0 8 35.65077240159739 37.0 35.0 37.0 35.0 37.0 9 37.50176083974008 39.0 37.0 39.0 35.0 39.0 10 36.73021726926614 39.0 37.0 39.0 32.0 39.0 11 36.40384333980438 38.0 35.0 39.0 32.0 39.0 12 35.96008467639304 37.0 35.0 39.0 31.0 39.0 13 35.78298215570062 37.0 35.0 39.0 30.0 39.0 14 36.82629633012797 39.0 35.0 40.0 31.0 41.0 15 36.972391043883974 39.0 35.0 40.0 31.0 41.0 16 37.074651445963816 39.0 35.0 41.0 32.0 41.0 17 36.997103549437874 39.0 35.0 40.0 31.0 41.0 18 36.88955974128825 38.0 35.0 40.0 31.0 41.0 19 36.82184212836792 38.0 35.0 40.0 31.0 41.0 20 36.6917107061362 38.0 35.0 40.0 31.0 41.0 21 36.57208002575411 38.0 35.0 40.0 31.0 41.0 22 36.46153157139981 38.0 35.0 40.0 30.0 41.0 23 36.36622806045121 38.0 35.0 40.0 30.0 41.0 24 36.25530136477274 38.0 35.0 40.0 30.0 41.0 25 36.089961572809905 38.0 34.0 40.0 30.0 41.0 26 35.8808349156207 38.0 34.0 40.0 30.0 41.0 27 35.969492376198026 38.0 34.0 40.0 30.0 41.0 28 35.98404025587383 38.0 34.0 40.0 30.0 41.0 29 35.96294299242542 38.0 34.0 40.0 30.0 41.0 30 35.88907773856918 38.0 34.0 40.0 30.0 41.0 31 35.80311585713564 38.0 34.0 40.0 29.0 41.0 32 35.64929801425522 38.0 34.0 40.0 29.0 41.0 33 35.482477627003504 38.0 34.0 40.0 28.0 41.0 34 35.275180540392896 38.0 34.0 40.0 27.0 41.0 35 35.08367159252457 38.0 34.0 40.0 25.0 41.0 36 35.01547375058421 38.0 34.0 40.0 25.0 41.0 37 34.96352121831841 38.0 34.0 40.0 25.0 41.0 38 34.8778630828486 38.0 34.0 40.0 25.0 41.0 39 34.8286495853535 38.0 34.0 40.0 24.0 41.0 40 34.64931353412198 37.0 33.0 40.0 24.0 41.0 41 34.57180687609914 37.0 33.0 40.0 24.0 41.0 42 34.52921504061327 37.0 33.0 40.0 24.0 41.0 43 34.4803416499126 37.0 33.0 40.0 23.0 41.0 44 34.328712108245306 37.0 33.0 40.0 23.0 41.0 45 34.205845313931434 37.0 33.0 40.0 23.0 41.0 46 34.13465745880362 37.0 33.0 40.0 23.0 41.0 47 34.08841934147875 36.0 33.0 40.0 23.0 41.0 48 33.99266442411982 36.0 33.0 40.0 23.0 41.0 49 33.8530379474045 36.0 33.0 40.0 23.0 41.0 50 33.737672126407986 36.0 33.0 40.0 23.0 41.0 51 33.41771677041328 35.0 32.0 39.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 0.0 10 2.0 11 0.0 12 5.0 13 10.0 14 38.0 15 104.0 16 221.0 17 558.0 18 1212.0 19 2292.0 20 3941.0 21 6261.0 22 9478.0 23 14003.0 24 20315.0 25 28943.0 26 37820.0 27 43291.0 28 47811.0 29 55529.0 30 66096.0 31 80441.0 32 99562.0 33 128795.0 34 191539.0 35 219447.0 36 201748.0 37 250731.0 38 341732.0 39 403202.0 40 46.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.62113078636061 24.772279212158352 28.233342527006783 13.373247474474253 2 32.638723220469906 25.732870279632525 27.946801444145773 13.681605055751794 3 29.650572417028577 26.169909727586433 30.832742839355188 13.346775016029804 4 25.94553679671724 28.357058036320037 30.738204679550226 14.959200487412502 5 23.551708205220528 33.00312969198829 29.115181356294457 14.329980746496723 6 22.327855855024932 41.929669284942094 25.73278159467961 10.009693265353361 7 89.89794135618804 2.952676822276241 5.9587419862059425 1.1906398353297794 8 90.44481711832435 2.520869786544187 5.754278827265657 1.2800342678658054 9 85.42400719412338 5.283627782157829 7.146366533136689 2.1459984905821012 10 39.253423460894815 35.50519826851498 13.834808311908528 11.40656995868168 11 33.56348556696734 25.677530869014987 24.657166143277635 16.10181742074004 12 31.518100155464722 23.45712570293911 27.327204020621025 17.697570120975143 13 24.971332588970963 28.18997558503246 28.323535124119026 18.51515670187755 14 20.90969477299756 30.439203360804978 29.032482637703342 19.618619228494122 15 20.37736334313893 27.056493201854938 34.89282866865262 17.673314786353515 16 24.547595883953967 25.464953036883188 32.69264367184084 17.294807407322008 17 23.78831965959168 25.3465586247447 28.219818071687598 22.645303643976032 18 24.88455436254586 26.10228745099048 30.05005378742394 18.963104399039718 19 27.220649049696387 27.042347951865352 26.64229012927606 19.094712869162205 20 29.026629430811102 27.067224081157377 26.32515273766015 17.58099375037137 21 26.587926253140555 26.96572415254876 28.411687967314275 18.03466162699641 22 25.654871863545786 24.406542466346277 28.55673220780303 21.381853462304903 23 23.206945450772313 28.54604567097705 28.158448084271992 20.088560793978647 24 22.979424204074718 26.718647873733914 31.159502548362124 19.142425373829248 25 22.888256072480438 27.213022143745892 29.67841949224317 20.220302291530498 26 22.401065283654386 30.273672896193375 27.072944260620247 20.252317559531992 27 21.593189705095924 29.512445602867004 28.743369691207864 20.150995000829205 28 19.8923896781357 29.664540297112328 30.906573062655035 19.53649696209694 29 21.27317005251036 27.633122765693468 30.802900352700057 20.290806829096113 30 22.326525580731243 28.021873256786396 29.985535484179938 19.666065678302427 31 24.98596560620156 27.833151676988116 27.65830929232068 19.52257342448964 32 25.652299999911314 27.623722160684714 27.645139576813143 19.078838262590825 33 24.91993965875804 28.227001552873528 27.007406080417738 19.845652707950695 34 22.020917232993995 28.83453782280214 29.03066459616863 20.11388034803523 35 21.86580725034964 28.584978365305737 29.318092528558772 20.23112185578585 36 24.909652204220162 29.467748386598995 26.364440171800492 19.258159237380355 37 22.846529802135002 31.129615719230536 26.552940039216487 19.470914439417978 38 23.34569305960427 30.14525708437575 25.958795197177693 20.55025465884229 39 22.929139835773206 29.660106049466695 26.521279511026645 20.88947460373346 40 24.32437585747264 27.703627303259083 26.738247248327625 21.233749590940654 41 21.010839961794524 27.844370323531574 27.663719074448355 23.481070640225543 42 22.850254570157336 27.87305990579884 26.590453774298567 22.686231749745254 43 22.49649029298848 27.765485057915708 27.14100996198076 22.597014687115053 44 21.769584076439337 29.099838859440556 27.491359868462478 21.639217195657633 45 21.337599670801456 30.364264575593726 26.200683406247144 22.097452347357677 46 22.29060817480159 29.832376570499658 26.580432374619427 21.29658288007932 47 21.83702898312946 29.27800692984222 27.662743539966318 21.222220547062 48 22.87349002782047 27.738702202136068 28.46294787009783 20.924859899945638 49 22.44589552735177 27.9738060123077 28.378741507307197 21.201556953033336 50 21.59957502170564 29.935517170737157 27.599599853492457 20.86530795406474 51 21.064050933542156 29.759654909111227 27.072944260620247 22.103349896726375 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 790.0 1 1461.5 2 2133.0 3 11278.5 4 20424.0 5 16023.5 6 11623.0 7 11132.5 8 10642.0 9 11113.0 10 11584.0 11 12137.5 12 12691.0 13 12633.5 14 12576.0 15 12201.5 16 11827.0 17 11323.5 18 10820.0 19 10737.0 20 10654.0 21 10930.5 22 11207.0 23 12628.0 24 14049.0 25 15434.5 26 21283.5 27 25747.0 28 30592.5 29 35438.0 30 40958.5 31 46479.0 32 52228.0 33 57977.0 34 65369.0 35 72761.0 36 76736.0 37 80711.0 38 90727.5 39 100744.0 40 112907.5 41 125071.0 42 137178.5 43 149286.0 44 155401.0 45 161516.0 46 162670.0 47 163824.0 48 161065.5 49 158307.0 50 157616.5 51 156926.0 52 147774.0 53 138622.0 54 130388.5 55 122155.0 56 113296.0 57 104437.0 58 101668.5 59 98900.0 60 92620.0 61 86340.0 62 76955.0 63 67570.0 64 57060.5 65 46551.0 66 39517.0 67 32483.0 68 27278.5 69 22074.0 70 18867.0 71 15660.0 72 13350.0 73 11040.0 74 9566.5 75 6333.0 76 4573.0 77 3345.5 78 2118.0 79 1494.5 80 871.0 81 685.0 82 499.0 83 409.5 84 320.0 85 219.5 86 119.0 87 89.0 88 59.0 89 46.0 90 33.0 91 25.0 92 17.0 93 13.5 94 10.0 95 5.5 96 1.0 97 1.5 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2255174.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.887530234960163 #Duplication Level Percentage of deduplicated Percentage of total 1 75.91273195189575 15.85629483863649 2 6.684508448910089 2.7924574466491223 3 2.4702627088275095 1.5479306105678758 4 1.4182065366409722 1.1849132765402577 5 0.960918215883795 1.0035604143798373 6 0.7403469093240975 0.9278411071719839 7 0.5880777579118449 0.8598444364223872 8 0.5201341547892826 0.8691454307517271 9 0.44329871175832664 0.8333473720473845 >10 8.203862808689134 44.15281064069656 >50 1.9723340167010475 26.79365255707386 >100 0.08422676168142955 2.5234839460474583 >500 4.3640679467679537E-4 0.05305197788998204 >1k 4.3640679467679537E-4 0.11362421037777082 >5k 0.0 0.0 >10k+ 2.1820339733839768E-4 0.4880417347473606 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 10708 0.47481923789472563 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.012149838549043222 0.0 2 0.0 0.0 0.0 0.03817887222892779 0.0 3 0.0 0.0 0.0 0.06877518098381766 0.0 4 0.0 0.0 0.0 0.11493569897489063 0.0 5 0.0 0.0 0.0 0.20752278981577474 0.0 6 0.0 0.0 0.0 0.40187586412400994 0.0 7 0.0 0.0 0.0 0.5077656979018027 0.0 8 0.0 0.0 0.0 0.7235805308149171 0.0 9 0.0 0.0 0.0 0.847961177275013 0.0 10 0.0 0.0 0.0 1.017704177149967 0.0 11 0.0 0.0 0.0 1.193389068870074 0.0 12 0.0 0.0 0.0 1.3277024300563947 0.0 13 0.0 0.0 0.0 1.4123078751351337 0.0 14 0.0 0.0 0.0 1.4590448453201394 0.0 15 0.0 0.0 0.0 1.5087527614277214 0.0 16 0.0 0.0 0.0 1.587460657137764 0.0 17 0.0 0.0 0.0 1.6817771045604464 0.0 18 0.0 0.0 0.0 1.7866914038561992 0.0 19 0.0 0.0 0.0 1.8588366130507004 0.0 20 4.4342476456362126E-5 0.0 0.0 1.9335536858796705 0.0 21 4.4342476456362126E-5 0.0 0.0 2.031905298659882 0.0 22 4.4342476456362126E-5 0.0 0.0 2.1406330509308815 0.0 23 4.4342476456362126E-5 0.0 0.0 2.2572981064875703 0.0 24 4.4342476456362126E-5 0.0 0.0 2.354009047638896 0.0 25 4.4342476456362126E-5 0.0 0.0 2.440831616540453 0.0 26 4.4342476456362126E-5 0.0 0.0 2.528097610206574 0.0 27 4.4342476456362126E-5 0.0 0.0 2.6222366877234307 0.0 28 4.4342476456362126E-5 0.0 0.0 2.7136708741764495 0.0 29 4.4342476456362126E-5 0.0 0.0 2.822930736164926 0.0 30 4.4342476456362126E-5 0.0 0.0 2.9559138230575557 0.0 31 4.4342476456362126E-5 0.0 0.0 3.0713816317499227 0.0 32 4.4342476456362126E-5 0.0 0.0 3.190795920846906 0.0 33 4.4342476456362126E-5 0.0 0.0 3.308081771073984 0.0 34 4.4342476456362126E-5 0.0 0.0 3.4294027866585903 0.0 35 4.4342476456362126E-5 0.0 0.0 3.564070887656562 0.0 36 4.4342476456362126E-5 0.0 0.0 3.6966105497846287 0.0 37 4.4342476456362126E-5 0.0 0.0 3.8356685559517802 0.0 38 0.0031039733519453486 0.0 0.0 3.984792304274526 0.0 39 0.0031039733519453486 0.0 0.0 4.201405301763855 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGTTAG 90 0.0 42.500004 1 CGTTTTT 7890 0.0 40.38023 1 GCGATCG 165 0.0 39.545456 9 GGGCGAT 4035 0.0 39.479553 7 TATAGCG 115 0.0 39.130436 1 ACGGGAT 930 0.0 38.70968 5 TCGATAC 35 6.2509644E-6 38.571426 25 CACGACC 960 0.0 38.20312 27 AGGGCGA 2260 0.0 38.13053 6 TAAGGGA 3130 0.0 37.739616 4 GGTACGC 30 1.1402703E-4 37.499996 8 GCGAATA 30 1.1402703E-4 37.499996 12 GGCGATA 985 0.0 37.46193 8 AGGGATC 2295 0.0 37.352943 6 CGTAAGG 355 0.0 36.760563 2 GACCGAT 1215 0.0 36.48148 9 TAGGGAC 2500 0.0 36.449997 5 AAGGGAT 3345 0.0 36.390133 5 GGCGATT 1115 0.0 36.322872 8 AACGGGA 845 0.0 36.213017 4 >>END_MODULE