##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547963_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2680559 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.79280888799687 31.0 31.0 31.0 30.0 33.0 2 31.10712205924212 31.0 31.0 33.0 30.0 34.0 3 31.124297208156957 31.0 31.0 34.0 28.0 34.0 4 35.09275602588863 35.0 35.0 37.0 32.0 37.0 5 34.965283733728675 35.0 35.0 37.0 32.0 37.0 6 35.022092033788475 36.0 35.0 37.0 32.0 37.0 7 35.495827176346424 35.0 35.0 37.0 35.0 37.0 8 35.59900267071159 37.0 35.0 37.0 35.0 37.0 9 37.39076588129566 39.0 37.0 39.0 35.0 39.0 10 36.478060359798086 38.0 35.0 39.0 32.0 39.0 11 36.09207557080445 38.0 35.0 39.0 31.0 39.0 12 35.805933016210425 37.0 35.0 39.0 30.0 39.0 13 35.698968386817825 37.0 35.0 39.0 30.0 39.0 14 36.70734760921136 39.0 35.0 40.0 31.0 41.0 15 36.8382094928707 39.0 35.0 40.0 31.0 41.0 16 36.905917012085915 39.0 35.0 40.0 31.0 41.0 17 36.832539406892366 38.0 35.0 40.0 31.0 41.0 18 36.70156970990006 38.0 35.0 40.0 31.0 41.0 19 36.61458225690985 38.0 35.0 40.0 30.0 41.0 20 36.44837028395943 38.0 35.0 40.0 30.0 41.0 21 36.33896996857745 38.0 35.0 40.0 30.0 41.0 22 36.225249658746556 38.0 34.0 40.0 30.0 41.0 23 36.12238156295012 38.0 34.0 40.0 30.0 41.0 24 36.003430627716085 38.0 34.0 40.0 30.0 41.0 25 35.83295126128542 38.0 34.0 40.0 29.0 41.0 26 35.604341109447695 38.0 34.0 40.0 29.0 41.0 27 35.67774259025823 38.0 34.0 40.0 29.0 41.0 28 35.663817882762515 38.0 34.0 40.0 29.0 41.0 29 35.65029682241652 38.0 34.0 40.0 29.0 41.0 30 35.54043988585963 38.0 34.0 40.0 28.0 41.0 31 35.427608196648535 38.0 34.0 40.0 27.0 41.0 32 35.24816278992554 38.0 34.0 40.0 27.0 41.0 33 35.03542880421584 38.0 33.0 40.0 25.0 41.0 34 34.768311012740256 38.0 33.0 40.0 24.0 41.0 35 34.5296294541549 38.0 33.0 40.0 23.0 41.0 36 34.4204555840778 38.0 33.0 40.0 23.0 41.0 37 34.36155107945768 38.0 33.0 40.0 23.0 41.0 38 34.25784957540573 37.0 33.0 40.0 23.0 41.0 39 34.20664421115148 37.0 33.0 40.0 22.0 41.0 40 34.03172994886514 37.0 33.0 40.0 21.0 41.0 41 33.93799203822785 37.0 33.0 40.0 21.0 41.0 42 33.89380871676393 37.0 33.0 40.0 21.0 41.0 43 33.829553835599214 37.0 33.0 40.0 21.0 41.0 44 33.6795455723974 37.0 32.0 40.0 20.0 41.0 45 33.56447106741542 37.0 32.0 40.0 20.0 41.0 46 33.495633933071424 36.0 32.0 40.0 20.0 41.0 47 33.437749364964546 36.0 32.0 40.0 20.0 41.0 48 33.332685831574686 36.0 32.0 40.0 20.0 41.0 49 33.18931872046092 36.0 31.0 40.0 19.0 41.0 50 33.078880561852955 36.0 31.0 40.0 18.0 41.0 51 32.764761753052255 35.0 31.0 39.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 5.0 13 14.0 14 39.0 15 121.0 16 384.0 17 942.0 18 1899.0 19 3741.0 20 6299.0 21 9904.0 22 14942.0 23 21361.0 24 31123.0 25 44398.0 26 57890.0 27 64409.0 28 69400.0 29 76946.0 30 88530.0 31 104388.0 32 124243.0 33 152844.0 34 206623.0 35 237735.0 36 237280.0 37 284654.0 38 383802.0 39 456611.0 40 30.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.04979222617372 25.027242452040788 28.174160688125127 15.748804633660368 2 33.13461856276993 26.16786274803129 27.8187124402037 12.878806248995078 3 28.233998953203415 25.892397817022495 32.50433957991598 13.369263649858107 4 24.802326678875563 28.018969177697638 32.710042942535495 14.468661200891306 5 22.93890938419934 31.97288326800492 31.41576066783085 13.672446679964889 6 20.91030266448155 41.25404439894813 27.70463175777888 10.131021178791439 7 87.6967826486938 2.866678181677777 8.204333499094778 1.2322056705336462 8 88.30292487499808 2.3041089563781285 7.859927724030697 1.5330384445930867 9 83.15187242660951 5.465352562655775 9.30332068796098 2.07945432277372 10 35.28775154734517 39.26031846342498 15.606782018228287 9.845147971001571 11 26.928301149125982 26.063742674568996 30.663790649636884 16.34416552666813 12 26.502606359345197 23.986041717417898 31.38807987438441 18.123272048852495 13 22.81005566376267 27.202908050149244 32.247340946422 17.739695339666092 14 18.871772641452772 29.97885888726941 32.633902107732006 18.515466363545812 15 18.422911042062495 28.285331529729437 36.59684416571319 16.694913262494875 16 22.343175434676123 27.251144257597016 34.21924307579128 16.186437231935578 17 21.68465607360256 26.93143482385577 30.973352946157874 20.410556156383798 18 21.824291127335755 26.964711465033975 32.59491770186741 18.616079705762864 19 23.752993312215846 28.41146193760331 29.4625113642341 18.373033385946737 20 25.079470364203882 28.89595043421913 29.115680721819594 16.908898479757394 21 23.449847587760615 27.732984052953135 31.44691088687098 17.37025747241527 22 22.70858429156008 25.425405670981316 31.464034180930174 20.401975856528434 23 20.0439535186504 29.018835250408593 31.400092294181924 19.537118936759086 24 20.037648863539285 28.066048909947515 33.61586146770132 18.280440758811874 25 20.789917326945613 29.419609864957273 30.823981117371414 18.966491690725704 26 20.15292332681355 31.291905904701224 29.240878488404842 19.314292280080387 27 19.30086224552416 30.34949053536967 31.060648170773337 19.288999048332826 28 18.37885306758777 30.07682352822676 32.57148975269711 18.972833651488365 29 19.417815463117954 28.178935811522894 32.30509009501377 20.098158630345388 30 20.7234386558923 28.13905607002122 31.701410041711448 19.436095232375038 31 21.866670347490953 29.025512962035155 29.76685086953878 19.34096582093511 32 22.198951785802887 28.973956551599873 29.828181360678872 18.998910301918368 33 21.466082261199997 29.091208214406024 29.48052999393037 19.962179530463608 34 19.697346710145162 29.826838357223252 30.706692148913717 19.769122783717876 35 19.74782125668564 29.69656702202787 30.554298562352106 20.001313158934387 36 21.851897309479103 30.42943654663076 28.573890744430546 19.14477539945959 37 20.12863734765771 31.484664206234598 28.91997527381416 19.46672317229354 38 20.63550923520057 31.339918278239725 28.374268203012882 19.650304283546827 39 20.646141345890914 29.93058537417009 28.484842154192464 20.938431125746533 40 22.06159237681394 29.079307711563146 28.741318508564817 20.117781403058093 41 19.29269230783579 29.322876310500906 29.07330150166439 22.311129879998912 42 20.59835280626168 29.70059603239474 28.299544982968104 21.40150617837548 43 20.6061496874346 29.215958313172735 28.920273719026518 21.25761828036615 44 20.471438979705354 30.26018080557078 28.56434049763501 20.70403971708886 45 19.634225547730903 30.91239551153323 27.817891715869713 21.635487224866157 46 20.747053133320325 30.64801035903332 27.78901714157383 20.815919366072524 47 20.14564872476226 29.992885812250353 29.035995850119324 20.825469612868062 48 20.559069955184718 29.271207983110987 29.630871769657002 20.538850292047293 49 20.692810715973796 28.749227306692372 29.359249320757346 21.198712656576483 50 19.37480204688649 30.212914545063175 29.34078302324254 21.071500384807795 51 18.97354245886772 30.390862502933157 28.865658245164532 21.769936793034585 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1359.0 1 1921.0 2 2483.0 3 20687.0 4 38891.0 5 29994.5 6 21098.0 7 19970.0 8 18842.0 9 20295.0 10 21748.0 11 22886.5 12 24025.0 13 24372.5 14 24720.0 15 23726.0 16 22732.0 17 21788.5 18 20845.0 19 20410.0 20 19975.0 21 20695.0 22 21415.0 23 22661.0 24 23907.0 25 26562.5 26 34301.0 27 39384.0 28 45088.0 29 50792.0 30 57780.0 31 64768.0 32 73482.0 33 82196.0 34 91733.0 35 101270.0 36 109548.5 37 117827.0 38 125215.5 39 132604.0 40 144113.0 41 155622.0 42 165988.5 43 176355.0 44 181387.5 45 186420.0 46 191911.5 47 197403.0 48 197362.5 49 197322.0 50 190098.0 51 182874.0 52 169220.5 53 155567.0 54 141090.0 55 126613.0 56 116579.0 57 106545.0 58 97954.5 59 89364.0 60 81345.5 61 73327.0 62 63342.5 63 53358.0 64 44973.5 65 36589.0 66 29794.0 67 22999.0 68 18556.5 69 14114.0 70 11918.0 71 9722.0 72 8155.0 73 6588.0 74 5442.5 75 3432.0 76 2567.0 77 2018.0 78 1469.0 79 1110.5 80 752.0 81 538.5 82 325.0 83 236.0 84 147.0 85 110.0 86 73.0 87 50.0 88 27.0 89 19.5 90 12.0 91 9.0 92 6.0 93 4.5 94 3.0 95 1.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2680559.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 25.23267604788521 #Duplication Level Percentage of deduplicated Percentage of total 1 75.40705556633469 19.027218048302025 2 7.138755857937783 3.6025982789657385 3 3.002182939921499 2.2725932867858045 4 1.8766258588604319 1.8940916943883854 5 1.2390038115629796 1.5631690899631834 6 0.9604863052576432 1.454138387339778 7 0.7178288806278764 1.267892052188949 8 0.6045014315117437 1.220255103345496 9 0.5184689680679655 1.1774123560926284 >10 7.3374029681876864 44.88920936434994 >50 1.1518771739185287 18.53062845193032 >100 0.0436730340306149 1.715399734557056 >500 0.0013739167160417868 0.25361272021881304 >1k 6.106296515741275E-4 0.23966864295283333 >5k 0.0 0.0 >10k+ 1.5265741289353186E-4 0.8921127886190325 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 23160 0.86399888978381 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.730565154506952E-5 0.0 0.0 0.03398544855755833 0.0 2 3.730565154506952E-5 0.0 0.0 0.1056122995240918 0.0 3 3.730565154506952E-5 0.0 0.0 0.18399147342028285 0.0 4 3.730565154506952E-5 0.0 0.0 0.3007208571048054 0.0 5 3.730565154506952E-5 0.0 0.0 0.5653671491655285 0.0 6 3.730565154506952E-5 0.0 0.0 1.0710452558589458 0.0 7 3.730565154506952E-5 0.0 0.0 1.3733702559801892 0.0 8 3.730565154506952E-5 0.0 0.0 1.8972535206276004 0.0 9 3.730565154506952E-5 0.0 0.0 2.1764490167909005 0.0 10 3.730565154506952E-5 0.0 0.0 2.535068245093654 0.0 11 3.730565154506952E-5 0.0 0.0 2.8508232797711224 0.0 12 3.730565154506952E-5 0.0 0.0 3.0836851567154464 0.0 13 3.730565154506952E-5 0.0 0.0 3.229438337302033 0.0 14 3.730565154506952E-5 0.0 0.0 3.3241946922265093 0.0 15 3.730565154506952E-5 0.0 0.0 3.403245367850512 0.0 16 3.730565154506952E-5 0.0 0.0 3.52848044008731 0.0 17 3.730565154506952E-5 0.0 0.0 3.6768823219335967 0.0 18 3.730565154506952E-5 0.0 0.0 3.855352558925209 0.0 19 3.730565154506952E-5 0.0 0.0 3.977565873386857 0.0 20 3.730565154506952E-5 0.0 0.0 4.102502500411295 0.0 21 3.730565154506952E-5 0.0 0.0 4.256798675201702 0.0 22 3.730565154506952E-5 0.0 0.0 4.427098974504944 0.0 23 3.730565154506952E-5 0.0 0.0 4.626796127225702 0.0 24 3.730565154506952E-5 0.0 0.0 4.778480906407954 0.0 25 3.730565154506952E-5 0.0 0.0 4.921883830947202 0.0 26 3.730565154506952E-5 0.0 0.0 5.05521422956928 0.0 27 3.730565154506952E-5 0.0 0.0 5.198803682366253 0.0 28 3.730565154506952E-5 0.0 0.0 5.348511262016617 0.0 29 3.730565154506952E-5 0.0 0.0 5.5160136374539785 0.0 30 3.730565154506952E-5 0.0 0.0 5.717053793630359 0.0 31 3.730565154506952E-5 0.0 0.0 5.889107458556219 0.0 32 3.730565154506952E-5 0.0 0.0 6.069219144215815 0.0 33 3.730565154506952E-5 0.0 0.0 6.242765035203478 0.0 34 3.730565154506952E-5 0.0 0.0 6.414259115356162 0.0 35 3.730565154506952E-5 0.0 0.0 6.603734519553571 0.0 36 3.730565154506952E-5 0.0 0.0 6.783808899561621 0.0 37 3.730565154506952E-5 0.0 0.0 6.97652989544345 0.0 38 3.730565154506952E-5 0.0 0.0 7.187456049279273 0.0 39 3.730565154506952E-5 0.0 0.0 7.485938567291375 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTAGTC 20 7.034971E-4 45.0 24 CGTTTTT 14545 0.0 42.401173 1 ACGCTAG 95 0.0 40.263157 1 GCGAACG 90 0.0 40.0 1 CGCGTAA 45 1.9299478E-8 40.0 31 CGAACGG 130 0.0 39.80769 2 CGGGTAT 205 0.0 39.512196 6 TACGGGA 1250 0.0 39.420002 4 GGGCGAT 4500 0.0 39.05 7 ACGGGAT 1575 0.0 39.0 5 AGGGCGA 2355 0.0 38.12102 6 TTAGGGA 4150 0.0 38.006023 4 TAGGGAT 4985 0.0 37.778336 5 CGGTTTT 1325 0.0 37.698112 1 TAGGGAC 3375 0.0 37.666668 5 AGGGATT 6045 0.0 37.630272 6 ACGGGAC 905 0.0 37.54144 5 CGGGATT 1430 0.0 37.44755 6 CACGGGA 980 0.0 37.42347 4 GACCGAT 1345 0.0 37.304832 9 >>END_MODULE