##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547961_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1576365 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.824549517402378 31.0 31.0 31.0 30.0 33.0 2 31.16201450806127 31.0 31.0 33.0 30.0 34.0 3 31.30975694081003 31.0 31.0 34.0 30.0 34.0 4 35.19958892769124 35.0 35.0 37.0 33.0 37.0 5 35.031665889562376 35.0 35.0 37.0 32.0 37.0 6 35.0668715684502 37.0 35.0 37.0 32.0 37.0 7 35.48723994760097 35.0 35.0 37.0 35.0 37.0 8 35.56892915029197 37.0 35.0 37.0 35.0 37.0 9 37.37351565151472 39.0 37.0 39.0 35.0 39.0 10 36.44240261614537 38.0 35.0 39.0 32.0 39.0 11 36.05705721707853 38.0 35.0 39.0 31.0 39.0 12 35.53080282802524 37.0 35.0 39.0 30.0 39.0 13 35.282116134270936 37.0 35.0 39.0 30.0 39.0 14 36.25897999511535 38.0 35.0 40.0 30.0 41.0 15 36.46605196131607 38.0 35.0 40.0 30.0 41.0 16 36.59204625832215 38.0 35.0 40.0 31.0 41.0 17 36.53490340117929 38.0 35.0 40.0 31.0 41.0 18 36.4541606797918 38.0 35.0 40.0 30.0 41.0 19 36.3913199037025 38.0 35.0 40.0 30.0 41.0 20 36.26895484231127 38.0 34.0 40.0 30.0 41.0 21 36.13316268757553 38.0 34.0 40.0 30.0 41.0 22 36.01804785059298 38.0 34.0 40.0 30.0 41.0 23 35.920069907667326 38.0 34.0 40.0 30.0 41.0 24 35.799328201273184 38.0 34.0 40.0 29.0 41.0 25 35.63590031496513 37.0 34.0 40.0 29.0 41.0 26 35.392434493280426 37.0 34.0 40.0 27.0 41.0 27 35.45245549095546 37.0 34.0 40.0 28.0 41.0 28 35.47879329977511 37.0 34.0 40.0 28.0 41.0 29 35.45439666574683 37.0 34.0 40.0 28.0 41.0 30 35.35614467461534 37.0 34.0 40.0 27.0 41.0 31 35.244238485376165 37.0 34.0 40.0 27.0 41.0 32 35.091812492665085 37.0 34.0 40.0 27.0 41.0 33 34.94251458259984 37.0 33.0 40.0 26.0 41.0 34 34.750439777589584 37.0 33.0 40.0 25.0 41.0 35 34.62281324439454 37.0 33.0 40.0 24.0 41.0 36 34.51543392551852 37.0 33.0 40.0 24.0 41.0 37 34.47366060525322 37.0 33.0 40.0 24.0 41.0 38 34.38510750999927 37.0 33.0 40.0 24.0 41.0 39 34.34074722542051 37.0 33.0 40.0 23.0 41.0 40 34.14643816628763 37.0 33.0 40.0 23.0 41.0 41 34.053096205510776 36.0 33.0 40.0 23.0 41.0 42 34.016086375934506 36.0 33.0 40.0 23.0 41.0 43 33.96350210769714 36.0 33.0 40.0 23.0 41.0 44 33.80366983534905 36.0 33.0 40.0 23.0 41.0 45 33.673279982745115 36.0 32.0 40.0 23.0 41.0 46 33.60238079378824 36.0 32.0 40.0 22.0 41.0 47 33.550261519381614 35.0 32.0 40.0 22.0 41.0 48 33.43572269112801 35.0 32.0 40.0 22.0 41.0 49 33.28293320392168 35.0 32.0 39.0 21.0 41.0 50 33.16795665978374 35.0 32.0 39.0 20.0 41.0 51 32.835298931402306 35.0 31.0 39.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 1.0 12 3.0 13 12.0 14 37.0 15 102.0 16 250.0 17 576.0 18 1232.0 19 2214.0 20 3766.0 21 5881.0 22 8682.0 23 12494.0 24 17530.0 25 23612.0 26 29406.0 27 34410.0 28 38893.0 29 45508.0 30 53997.0 31 64697.0 32 77458.0 33 97125.0 34 139761.0 35 158729.0 36 136489.0 37 162347.0 38 212938.0 39 248194.0 40 20.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.14841423147558 25.466881084012904 28.342230384460454 13.042474300051065 2 31.33252768235783 27.361873677733268 28.016480954601253 13.289117685307655 3 29.463100233765655 25.96372033126846 30.08535459744412 14.487824837521767 4 25.541356221433485 29.23904045065705 30.434322000298152 14.785281327611308 5 23.262632702451526 32.77787821982853 29.396618169015426 14.56287090870452 6 21.322980401112687 42.133960091730025 26.568212311235023 9.974847195922264 7 89.78282314057975 3.429599109343331 5.416258290434005 1.3713194596429126 8 90.1840627012145 2.838048294652571 5.147729110960976 1.8301598931719496 9 85.4923827920564 5.313299901989704 6.761885730779356 2.4324315751745313 10 42.44461149543412 30.081040875685517 14.578095809029001 12.896251819851368 11 34.31343629172178 26.369590799085234 22.39081684762095 16.926156061572033 12 31.54034757178699 23.726865288178818 26.827479676343994 17.9053074636902 13 24.342649069219373 30.234114561031234 27.68971653138708 17.73351983836231 14 19.883339201263666 33.31385814833494 28.756474547455696 18.0463281029457 15 18.759804994401676 28.05771505964672 35.68177420838448 17.500705737567124 16 21.71736875660142 25.24275786381961 35.16748976284046 17.87238361673851 17 21.74635950430262 25.857209466081777 27.476821675183093 24.919609354432506 18 23.415960136135983 26.810605411817694 30.42797829182962 19.3454561602167 19 25.929971802215857 28.667979814319654 25.956551940699015 19.445496442765474 20 27.29938814931821 28.294018200099597 25.8532129297466 18.553380720835595 21 25.02770614673632 28.186872964066062 28.397801270644806 18.387619618552808 22 24.030919235075633 25.6589685764401 27.72631972925052 22.58379245923374 23 21.52604250919045 29.672379176142584 27.034728632010985 21.766849682655984 24 21.75790505371535 28.1728533683506 30.956409207258474 19.112832370675573 25 21.803896940112217 28.561278637878917 29.237073901031803 20.39775052097706 26 20.987651971465997 32.19996637834512 26.344025653957047 20.46835599623184 27 20.541816140297456 31.279494279560886 28.353205000111014 19.82548458003064 28 19.54382392402775 29.65988207045957 31.2582428561913 19.53805114932138 29 20.07929635585667 28.47475045436812 30.94549802869259 20.500455161082616 30 21.536636502332897 29.253123483457195 29.29004386674406 19.920196147465845 31 25.248720949780036 28.566861101331227 26.491453438765767 19.692964510122973 32 25.967336245095517 28.825050036000544 26.513402670066892 18.69421104883704 33 25.428691959032328 28.849980810281885 25.616085107192816 20.10524212349297 34 21.04220786429539 29.247794768343628 28.305246564088897 21.404750803272083 35 21.790448278158927 29.311041541774905 28.010644742810197 20.887865437255964 36 25.625981292403726 29.007812276979 26.118697129154732 19.247509301462543 37 21.909329374859247 31.958842019456153 26.352209037881458 19.77961956780314 38 21.868412455237205 32.00902075344225 25.170439587278327 20.952127204042213 39 21.140598782642346 30.513110859477344 26.717670082753674 21.628620275126636 40 23.540614007542672 28.469802361762664 26.937606455357738 21.05197717533693 41 20.16011520174579 28.14176919685479 28.01127911365705 23.68683648774237 42 22.213256447586694 29.04809482575419 26.28154012554199 22.457108601117127 43 21.885032971424764 28.397103462713268 26.91210474731423 22.805758818547737 44 20.92611799932122 29.743428710990155 28.01470471623006 21.31574857345856 45 20.58894989421866 31.831904413000796 25.390820019475186 22.188325673305357 46 22.298008392726302 30.457920595801095 26.581280350680203 20.662790660792393 47 21.993827571660116 29.663117361778525 26.998506056655657 21.3445490099057 48 22.327633511274357 28.574727299832208 28.117155607996878 20.980483580896557 49 21.597726414884878 27.71623323278555 29.121999029412603 21.564041322916964 50 20.88482045719107 30.19059672093709 27.69606023985562 21.22852258201622 51 20.080501660465693 31.17583808318505 26.541251550243754 22.2024087061055 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1026.0 1 1456.5 2 1887.0 3 6572.0 4 11257.0 5 8855.0 6 6453.0 7 6352.5 8 6252.0 9 7180.0 10 8108.0 11 8727.0 12 9346.0 13 9805.5 14 10265.0 15 9889.5 16 9514.0 17 9505.0 18 9496.0 19 9613.0 20 9730.0 21 9621.5 22 9513.0 23 10672.0 24 11831.0 25 13610.0 26 16937.0 27 18485.0 28 20948.0 29 23411.0 30 27405.0 31 31399.0 32 35813.0 33 40227.0 34 43715.0 35 47203.0 36 51615.5 37 56028.0 38 62175.0 39 68322.0 40 81802.0 41 95282.0 42 103158.0 43 111034.0 44 114090.5 45 117147.0 46 118547.5 47 119948.0 48 122052.0 49 124156.0 50 117618.0 51 111080.0 52 102451.5 53 93823.0 54 86785.5 55 79748.0 56 74524.0 57 69300.0 58 65798.5 59 62297.0 60 57950.5 61 53604.0 62 47115.0 63 40626.0 64 35251.0 65 29876.0 66 25806.5 67 21737.0 68 18341.0 69 14945.0 70 12162.5 71 9380.0 72 8339.5 73 7299.0 74 5840.5 75 3451.5 76 2521.0 77 1958.5 78 1396.0 79 1112.5 80 829.0 81 600.0 82 371.0 83 300.0 84 229.0 85 169.5 86 110.0 87 84.0 88 58.0 89 44.5 90 31.0 91 21.0 92 11.0 93 6.0 94 1.0 95 1.5 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1576365.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 25.322617947491306 #Duplication Level Percentage of deduplicated Percentage of total 1 78.27759018172928 19.82193510022227 2 7.132074455160803 3.6120559320219847 3 2.755091192039399 2.0929836499953622 4 1.5368105811987847 1.5566426882143554 5 0.9614592751974281 1.2173332948948186 6 0.7686008156983292 1.167779088603538 7 0.612361615725448 1.0854619468506803 8 0.49199554169026305 0.9966892107273249 9 0.40946112584330163 0.9331764888671626 >10 5.288186648203315 31.47084104294504 >50 1.4862907366677052 26.346052421755832 >100 0.27803346712683824 8.821052976689705 >500 0.0010221818595406102 0.20040935303525892 >1k 7.666363946554577E-4 0.27424437783772276 >5k 2.5554546488515254E-4 0.4033424273389632 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6233 0.39540334884370054 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.01719144994972611 0.0 2 0.0 0.0 0.0 0.07758355457016618 0.0 3 0.0 0.0 0.0 0.12611292435444837 0.0 4 0.0 0.0 0.0 0.21777951172475918 0.0 5 0.0 0.0 0.0 0.42027068604035234 0.0 6 0.0 0.0 0.0 0.7784999032584459 0.0 7 0.0 0.0 0.0 0.9537131311593444 0.0 8 0.0 0.0 0.0 1.3602179698229788 0.0 9 0.0 0.0 0.0 1.5450736345960485 0.0 10 0.0 0.0 0.0 1.8576281508407 0.0 11 0.0 0.0 0.0 2.24161282444104 0.0 12 0.0 0.0 0.0 2.5270162684403674 0.0 13 0.0 0.0 0.0 2.687829278117695 0.0 14 0.0 0.0 0.0 2.7709952961401707 0.0 15 0.0 0.0 0.0 2.8607587709699214 0.0 16 0.0 0.0 0.0 3.0293111049788597 0.0 17 0.0 0.0 0.0 3.2200029815429803 0.0 18 0.0 0.0 0.0 3.4440627646515876 0.0 19 0.0 0.0 0.0 3.584512470144922 0.0 20 0.0 0.0 0.0 3.7228687518436403 0.0 21 0.0 0.0 0.0 3.9057578669914643 0.0 22 0.0 0.0 0.0 4.104760001649364 0.0 23 0.0 0.0 0.0 4.317845169107408 0.0 24 0.0 0.0 0.0 4.488173741487536 0.0 25 0.0 0.0 0.0 4.641247426833252 0.0 26 0.0 0.0 0.0 4.78245837734281 0.0 27 0.0 0.0 0.0 4.934643943502932 0.0 28 0.0 0.0 0.0 5.1005319199550865 0.0 29 0.0 0.0 0.0 5.28507039930473 0.0 30 0.0 0.0 0.0 5.486356269011301 0.0 31 0.0 0.0 0.0 5.673241920494302 0.0 32 0.0 0.0 0.0 5.849279830496109 0.0 33 0.0 0.0 0.0 6.02855303181687 0.0 34 0.0 0.0 0.0 6.207572484798889 0.0 35 0.0 0.0 0.0 6.414250506703714 0.0 36 0.0 0.0 0.0 6.608114237502101 0.0 37 0.0 0.0 0.0 6.81162040517266 0.0 38 0.0 0.0 0.0 7.027433367272174 0.0 39 0.0 0.0 0.0 7.332946367116753 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTATCGG 20 7.034086E-4 45.0 2 GTAACGA 20 7.034086E-4 45.0 18 CACGACG 225 0.0 43.000004 26 TAGTACG 100 0.0 42.75 1 CGTAAGG 180 0.0 42.5 2 TCACGAC 230 0.0 41.086956 25 GGTACGC 50 1.0822987E-9 40.5 8 CGACGGT 245 0.0 40.408165 28 TCTCACG 230 0.0 40.108692 23 CAGTTCG 45 1.9290383E-8 40.0 1 CGTTTTT 4120 0.0 39.866505 1 CGGTCTA 235 0.0 39.255318 31 TAACGGG 350 0.0 39.214287 3 TTAGGCG 115 0.0 39.130432 1 GCGAACT 35 6.2497656E-6 38.571426 24 GCGATAC 65 9.094947E-12 38.07692 9 CGAGGGT 160 0.0 37.96875 4 TAGGGTA 795 0.0 37.92453 5 TGGGCGA 600 0.0 37.875004 6 GTAGGGT 880 0.0 37.840908 4 >>END_MODULE