##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547959_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2213836 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.45512314371977 31.0 31.0 33.0 30.0 34.0 2 31.87202620248293 31.0 31.0 34.0 30.0 34.0 3 31.983248985019667 33.0 31.0 34.0 30.0 34.0 4 35.748912295219704 37.0 35.0 37.0 35.0 37.0 5 35.653685729204874 37.0 35.0 37.0 33.0 37.0 6 35.70942020998845 37.0 35.0 37.0 33.0 37.0 7 35.985461886065636 37.0 35.0 37.0 35.0 37.0 8 35.99566860417845 37.0 35.0 37.0 35.0 37.0 9 37.754609194176986 39.0 38.0 39.0 35.0 39.0 10 37.263742210353435 39.0 37.0 39.0 34.0 39.0 11 37.069193472325864 39.0 37.0 39.0 33.0 39.0 12 36.492394648926116 39.0 35.0 39.0 33.0 39.0 13 36.26745748104196 39.0 35.0 39.0 32.0 39.0 14 37.33207383022049 39.0 35.0 41.0 32.0 41.0 15 37.51899418023738 39.0 35.0 41.0 33.0 41.0 16 37.612646555571416 39.0 35.0 41.0 33.0 41.0 17 37.53420397897586 39.0 35.0 41.0 33.0 41.0 18 37.44180372891217 39.0 36.0 41.0 33.0 41.0 19 37.39247803360321 39.0 35.0 41.0 32.0 41.0 20 37.26895985068451 39.0 35.0 41.0 32.0 41.0 21 37.15368211556773 39.0 35.0 41.0 32.0 41.0 22 37.06303989997453 39.0 35.0 41.0 32.0 41.0 23 36.94345561279155 39.0 35.0 41.0 32.0 41.0 24 36.90303301599577 38.0 35.0 41.0 32.0 41.0 25 36.945392070596014 39.0 35.0 41.0 32.0 41.0 26 36.86242928563814 39.0 35.0 41.0 32.0 41.0 27 36.78874135211461 38.0 35.0 41.0 31.0 41.0 28 36.74740043977964 38.0 35.0 41.0 31.0 41.0 29 36.76851718013439 38.0 35.0 41.0 31.0 41.0 30 36.71559139882087 38.0 35.0 41.0 31.0 41.0 31 36.59049992863066 38.0 35.0 41.0 31.0 41.0 32 36.44965751753969 38.0 35.0 41.0 31.0 41.0 33 36.318893992147565 38.0 35.0 41.0 30.0 41.0 34 36.19428403910678 38.0 35.0 41.0 30.0 41.0 35 36.114183254766836 38.0 35.0 41.0 30.0 41.0 36 36.03918718459723 38.0 35.0 41.0 30.0 41.0 37 35.94982148632509 38.0 35.0 41.0 30.0 41.0 38 35.86659129221857 38.0 35.0 40.0 29.0 41.0 39 35.817982000473386 38.0 35.0 40.0 29.0 41.0 40 35.67013907082548 38.0 35.0 40.0 29.0 41.0 41 35.60141085428189 38.0 35.0 40.0 28.0 41.0 42 35.58431970570539 38.0 35.0 40.0 28.0 41.0 43 35.51846929944224 38.0 35.0 40.0 28.0 41.0 44 35.35250985167826 38.0 34.0 40.0 27.0 41.0 45 35.229408592145035 38.0 34.0 40.0 27.0 41.0 46 35.18147956759218 38.0 34.0 40.0 27.0 41.0 47 35.13865841914216 37.0 34.0 40.0 27.0 41.0 48 35.033558493041035 37.0 34.0 40.0 27.0 41.0 49 34.9306095844498 37.0 34.0 40.0 26.0 41.0 50 34.82404026314506 37.0 34.0 40.0 26.0 41.0 51 34.50200918225198 36.0 34.0 40.0 25.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 3.0 11 2.0 12 7.0 13 9.0 14 12.0 15 49.0 16 139.0 17 327.0 18 671.0 19 1339.0 20 2385.0 21 4002.0 22 6141.0 23 9219.0 24 13928.0 25 20476.0 26 26592.0 27 31722.0 28 35016.0 29 40411.0 30 49006.0 31 60359.0 32 75853.0 33 101475.0 34 175854.0 35 258729.0 36 159131.0 37 209606.0 38 332540.0 39 598719.0 40 112.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.54253521941101 24.628292249290375 30.11835565055406 13.710816880744552 2 31.283482606661018 25.32161370580296 29.727721475303497 13.667182212232523 3 28.66016272208059 25.613866609812106 32.042978793370416 13.682991874736883 4 25.986297087950504 27.813848902990102 31.063863809243326 15.135990199816066 5 23.993963419151193 32.70901728944691 29.04998382897378 14.247035462428112 6 23.09805243026132 40.4631598727277 26.0603766493995 10.378411047611475 7 88.9832399509268 3.518146782327146 5.809779947566125 1.688833319179921 8 89.11942890078579 2.911507446802744 5.838869726574146 2.130193925837325 9 83.78434536252911 6.0292632335909255 7.425346773654418 2.761044630225545 10 36.265784818749 40.61809456527042 12.576857545003334 10.539263070977253 11 37.03887731521215 22.982370871193712 24.430129422414307 15.548622391179833 12 34.44681539192605 21.683810363549966 26.781297259598276 17.088076984925713 13 24.80811586766138 31.286238004983208 27.34064311900249 16.56500300835292 14 18.5188514415702 34.897074580050194 28.887867032607655 17.69620694577195 15 16.551090505349087 26.5389577186386 39.916642425184165 16.993309350828156 16 20.574965805958527 23.909088116734935 38.01207496851619 17.503871108790353 17 20.573023475993704 23.25754933969815 28.780361327578014 27.389065856730127 18 21.586242160665922 24.85423491170981 33.09757362333976 20.46194930428451 19 25.0444025664051 25.76229675549589 28.607358449316028 20.58594222878298 20 26.807586469819807 25.734607260881116 27.78213923705279 19.67566703224629 21 23.70324631092818 26.52116055570512 30.767952097626022 19.007641035740676 22 23.251406156553603 24.153279646730834 28.685187159301773 23.91012703741379 23 19.700781810396073 28.60528060795831 28.64082976336097 23.053107818284644 24 19.866241221120266 25.98033458666315 34.34798241604165 19.805441776174927 25 19.0120225707776 27.73904661411234 32.34458198348929 20.90434883162077 26 19.044048429965002 31.35521330396651 28.401064938866295 21.199673327202195 27 18.547308834078045 31.442889175169253 30.75837595919481 19.251426031557894 28 16.423709796028252 29.243042393384155 35.146189690654595 19.187058119933003 29 18.330535775911134 25.925181449755087 33.97523574465317 21.769047029680607 30 19.698207093931078 28.254938486861718 32.29200356304622 19.75485085616098 31 24.556968086163565 27.58722868360619 27.916882732054226 19.938920498176017 32 25.290446085437225 27.004213500909735 29.186398631154248 18.518941782498793 33 24.180833629952716 28.257332521469518 27.285851345808815 20.27598250276895 34 19.807519617532645 28.213788193886085 30.038087735496216 21.94060445308505 35 19.0959041229793 27.756121049617043 30.501627040124017 22.646347787279637 36 24.90681333215288 26.1343658699199 28.781761611971255 20.17705918595596 37 19.997145226656357 30.359746611763473 30.40550429209752 19.23760386948265 38 20.198695838354784 30.41060855456321 27.004529694159817 22.386165912922184 39 20.211479079751165 29.024462516645315 29.254967395958868 21.50909100764465 40 21.720579121488672 26.60499693744252 29.22239949119989 22.452024449868915 41 18.301581508296007 26.61389551890926 29.43533305990146 25.649189912893277 42 21.118502002858385 26.76788163170172 28.17819386801913 23.935422497420767 43 21.146869054437637 26.78351061234888 29.049532124330803 23.02008820888268 44 19.679822714961723 28.515436554469254 28.961856253128055 22.84288447744097 45 18.979093302304236 31.64272330922435 26.613534155194873 22.764649233276536 46 21.565870281267447 29.383838730601543 28.281227697083256 20.769063291047758 47 20.605365528431193 28.065583900523798 28.84427753455992 22.484773036485088 48 20.59660245835735 26.837218294399406 30.55167591456639 22.014503332676856 49 21.230524754317845 25.117488377639535 30.79889386567027 22.85309300237235 50 19.923110835671658 29.198775338371945 28.990223304707303 21.88789052124909 51 18.899954648853846 29.567140474723512 27.649925288052053 23.882979588370592 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2046.0 1 3237.0 2 4428.0 3 10787.5 4 17147.0 5 12936.0 6 8725.0 7 8604.5 8 8484.0 9 9021.5 10 9559.0 11 9871.0 12 10183.0 13 10377.0 14 10571.0 15 10077.5 16 9584.0 17 9479.5 18 9375.0 19 8693.0 20 8011.0 21 9508.5 22 11006.0 23 11704.5 24 12403.0 25 13650.0 26 18947.5 27 22998.0 28 29623.0 29 36248.0 30 41874.5 31 47501.0 32 52860.0 33 58219.0 34 65226.5 35 72234.0 36 78507.5 37 84781.0 38 93751.0 39 102721.0 40 122628.5 41 142536.0 42 163534.0 43 184532.0 44 192811.5 45 201091.0 46 204808.5 47 208526.0 48 198298.0 49 188070.0 50 169557.0 51 151044.0 52 137856.0 53 124668.0 54 115153.5 55 105639.0 56 97767.5 57 89896.0 58 81480.0 59 73064.0 60 65446.5 61 57829.0 62 51066.5 63 44304.0 64 37632.0 65 30960.0 66 25527.5 67 20095.0 68 16259.5 69 12424.0 70 9937.5 71 7451.0 72 6055.5 73 4660.0 74 3888.0 75 2342.5 76 1569.0 77 1121.0 78 673.0 79 447.5 80 222.0 81 188.5 82 155.0 83 132.0 84 109.0 85 70.5 86 32.0 87 28.5 88 25.0 89 15.5 90 6.0 91 5.5 92 5.0 93 8.0 94 11.0 95 7.0 96 3.0 97 1.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2213836.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.591656304838175 #Duplication Level Percentage of deduplicated Percentage of total 1 76.5883650197252 15.004929244159468 2 9.173701900194681 3.594560293433101 3 3.266478671692087 1.919871823886271 4 1.562196737003608 1.2242408620765743 5 0.9405897924768378 0.9213855969022635 6 0.6066767025675647 0.7131480866913756 7 0.4390920887860216 0.6021778902768455 8 0.3296620308243474 0.5166900163732466 9 0.28905200805037456 0.509670683635163 >10 3.5645099989193727 17.914374220720738 >50 2.380981080718056 34.0645615560052 >100 0.8526138921857827 21.582994371696348 >500 0.004910831306803153 0.6018705235535213 >1k 9.353964393910768E-4 0.3751783297084408 >5k 2.338491098477692E-4 0.4543465008815004 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9917 0.44795549444493626 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 3938 0.17788128840618725 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.07331166355592736 0.0 2 0.0 0.0 0.0 0.26673159168068455 0.0 3 0.0 0.0 0.0 0.40427565546860744 0.0 4 0.0 0.0 0.0 0.622494168493059 0.0 5 0.0 0.0 0.0 1.0347649961424423 0.0 6 0.0 0.0 0.0 1.4188494540697685 0.0 7 0.0 0.0 0.0 1.6453793325250832 0.0 8 0.0 0.0 0.0 2.183359562316269 0.0 9 0.0 0.0 0.0 2.3591630093647407 0.0 10 0.0 0.0 0.0 2.742163376148911 0.0 11 0.0 0.0 0.0 3.291752415264726 0.0 12 0.0 0.0 0.0 3.7293638733853816 0.0 13 0.0 0.0 0.0 3.9023215811830685 0.0 14 0.0 0.0 0.0 3.9765366540249594 0.0 15 0.0 0.0 0.0 4.095199463736248 0.0 16 0.0 0.0 0.0 4.364099237703244 0.0 17 0.0 0.0 0.0 4.6704453265734225 0.0 18 0.0 0.0 0.0 5.057420694215832 0.0 19 0.0 0.0 0.0 5.270534944774591 0.0 20 0.0 0.0 0.0 5.509441530447603 0.0 21 0.0 0.0 0.0 5.80670835599385 0.0 22 0.0 0.0 0.0 6.120191378223138 0.0 23 0.0 0.0 0.0 6.440224117775662 0.0 24 0.0 0.0 0.0 6.682518488271037 0.0 25 0.0 0.0 0.0 6.900511148973998 0.0 26 0.0 0.0 0.0 7.123066026571074 0.0 27 0.0 0.0 0.0 7.333605560664837 0.0 28 0.0 0.0 0.0 7.563432883013918 0.0 29 0.0 0.0 0.0 7.805953105830784 0.0 30 0.0 0.0 0.0 8.105975329699218 0.0 31 0.0 0.0 0.0 8.391362323135047 0.0 32 0.0 0.0 0.0 8.635147318952262 0.0 33 0.0 0.0 0.0 8.890405612701212 0.0 34 0.0 0.0 0.0 9.143450553699552 0.0 35 0.0 0.0 0.0 9.460727894929887 0.0 36 0.0 0.0 0.0 9.743133637722035 0.0 37 0.0 0.0 0.0 10.01578256022578 0.0 38 0.0 0.0 0.0 10.28558574347874 0.0 39 0.0 0.0 0.0 10.59360313952795 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGCGCG 25 3.8919803E-5 45.000004 1 TCCGCAT 40 6.8193913E-9 45.0 36 CTATCGA 20 7.034704E-4 45.0 27 CGTTGTA 20 7.034704E-4 45.0 34 TCTATCG 35 1.2126111E-7 45.0 26 TAACGCC 60 0.0 44.999996 12 CACTCGA 30 2.1664182E-6 44.999996 27 CGACGGT 675 0.0 43.333336 28 TACGGGA 850 0.0 41.823532 4 CGGTCTA 710 0.0 40.880283 31 CGTTTTT 5915 0.0 40.663567 1 AGGGCGA 1840 0.0 40.475548 6 GGCGATA 830 0.0 40.391563 8 TAGGGCG 720 0.0 40.3125 5 CGTTAAC 45 1.9297659E-8 40.0 20 GACGATT 45 1.9297659E-8 40.0 9 GATCGAC 80 0.0 39.375 9 CACGACG 745 0.0 38.959732 26 GACGGTC 750 0.0 38.7 29 GGGCGAT 3640 0.0 38.695057 7 >>END_MODULE