##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547956_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2440206 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.332352268619946 31.0 31.0 33.0 30.0 34.0 2 31.72355448679333 31.0 31.0 34.0 30.0 34.0 3 31.816375338803365 31.0 31.0 34.0 30.0 34.0 4 35.61357565713714 37.0 35.0 37.0 33.0 37.0 5 35.5301355705215 37.0 35.0 37.0 33.0 37.0 6 35.579003166126135 37.0 35.0 37.0 33.0 37.0 7 35.91267950328784 37.0 35.0 37.0 35.0 37.0 8 35.9111681554754 37.0 35.0 37.0 35.0 37.0 9 37.64611389366308 39.0 37.0 39.0 35.0 39.0 10 37.124584153960775 39.0 37.0 39.0 33.0 39.0 11 36.9382105445196 39.0 37.0 39.0 33.0 39.0 12 36.47577335683955 39.0 35.0 39.0 32.0 39.0 13 36.33482419107239 39.0 35.0 39.0 32.0 39.0 14 37.35608510101196 39.0 36.0 41.0 32.0 41.0 15 37.51594414569917 40.0 36.0 41.0 32.0 41.0 16 37.59342366996885 40.0 36.0 41.0 32.0 41.0 17 37.509463955092315 39.0 35.0 41.0 32.0 41.0 18 37.41348476317163 39.0 36.0 41.0 32.0 41.0 19 37.35384430658723 39.0 36.0 41.0 32.0 41.0 20 37.220788736688625 39.0 35.0 41.0 32.0 41.0 21 37.114828830025004 39.0 35.0 41.0 32.0 41.0 22 37.03948396159996 39.0 35.0 41.0 31.0 41.0 23 36.896285805378724 39.0 35.0 41.0 31.0 41.0 24 36.873904498226786 39.0 35.0 41.0 31.0 41.0 25 36.89522564898209 39.0 35.0 41.0 31.0 41.0 26 36.81383825791757 39.0 35.0 41.0 31.0 41.0 27 36.7363296377437 39.0 35.0 41.0 31.0 41.0 28 36.665742564357274 39.0 35.0 41.0 31.0 41.0 29 36.64737198416855 38.0 35.0 41.0 31.0 41.0 30 36.53925939039573 38.0 35.0 41.0 30.0 41.0 31 36.41891299341121 38.0 35.0 41.0 30.0 41.0 32 36.267752804476345 38.0 35.0 41.0 30.0 41.0 33 36.139498468571915 38.0 35.0 41.0 30.0 41.0 34 35.99190560141234 38.0 35.0 41.0 29.0 41.0 35 35.88335697887801 38.0 35.0 41.0 29.0 41.0 36 35.80834978686226 38.0 35.0 40.0 28.0 41.0 37 35.71263204827789 38.0 35.0 40.0 28.0 41.0 38 35.58679636063513 38.0 34.0 40.0 27.0 41.0 39 35.518561957474084 38.0 34.0 40.0 27.0 41.0 40 35.36896884935124 38.0 34.0 40.0 26.0 41.0 41 35.250159207870155 38.0 34.0 40.0 26.0 41.0 42 35.235532164087786 38.0 34.0 40.0 26.0 41.0 43 35.164169746324696 38.0 34.0 40.0 26.0 41.0 44 35.024262295888136 38.0 34.0 40.0 25.0 41.0 45 34.88672267833125 38.0 34.0 40.0 25.0 41.0 46 34.81448574423635 37.0 34.0 40.0 24.0 41.0 47 34.737527077631974 37.0 34.0 40.0 24.0 41.0 48 34.580571066541104 37.0 34.0 40.0 24.0 41.0 49 34.426220982982585 37.0 33.0 40.0 24.0 41.0 50 34.32580282156506 37.0 33.0 40.0 24.0 41.0 51 34.043994646353624 36.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 6.0 11 2.0 12 3.0 13 6.0 14 25.0 15 76.0 16 178.0 17 408.0 18 958.0 19 1876.0 20 3269.0 21 5280.0 22 8200.0 23 12431.0 24 18383.0 25 26383.0 26 34835.0 27 40326.0 28 44662.0 29 51447.0 30 60080.0 31 72905.0 32 89167.0 33 113722.0 34 176356.0 35 234393.0 36 187608.0 37 247352.0 38 383007.0 39 626764.0 40 97.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.36771567646338 24.242010715488775 29.338547647206838 13.05172596084101 2 31.580571476342573 25.859456127884282 28.85543269707557 13.704539698697568 3 29.14372802951882 26.09427236880821 31.067827880105202 13.694171721567768 4 26.03915407141856 27.970220546953822 30.648641958916585 15.341983422711033 5 23.61394898627411 32.47266829111968 29.191305979904975 14.722076742701232 6 22.23152471553631 41.10759501451927 26.127343347241993 10.533536922702428 7 88.8333198098849 3.1900175640909003 6.3981483530488825 1.5785142729753145 8 88.75238402003765 2.659570544454034 6.42281840139726 2.1652270341110547 9 82.65453818243213 6.338973021130183 8.023175092594641 2.983313703843036 10 33.92988132969102 42.750325177464525 12.807238405282176 10.51255508756228 11 33.29780354609406 23.685787183541063 26.558864292604806 16.457544977760076 12 31.30047217325095 22.016051103882216 28.350434348575487 18.33304237429135 13 25.4758409740817 27.3861305152106 29.85018477948173 17.287843731225973 14 19.86807671155632 30.320718824558256 30.708063171715832 19.103141292169596 15 18.309847611226264 26.798885012167005 36.98302520360986 17.908242172996868 16 22.903066380461322 25.640990965516846 34.14719904794923 17.308743606072603 17 22.05494126315565 24.789915277644592 28.894035995321705 24.261107463878048 18 23.1712814409931 25.002397338585347 32.06770248085613 19.75861873956543 19 24.665089750619416 26.599393657748564 28.21745377234545 20.518062819286566 20 26.218892995099598 27.17352551382957 27.83945289864872 18.768128592422116 21 24.604644034151217 26.6673387410735 30.564960499236538 18.163056725538745 22 24.350403203663955 23.15066842717377 30.021932574544934 22.47699579461734 23 20.764681342476823 27.790276722538998 29.73015392962725 21.714888005356926 24 20.35615025944531 26.3555208043911 33.24678326338022 20.041545672783364 25 20.920651781038156 27.526610458297373 30.797563812235524 20.755173948428947 26 20.998227198851243 29.65684044707701 27.65467341691644 21.690258937155306 27 20.67284483359192 28.996568322510473 29.697533732807802 20.6330531110898 28 18.583349110689834 28.479685731450544 32.230147782605236 20.706817375254385 29 20.35852710795728 26.48702609533785 31.268425698486112 21.88602109821876 30 22.3116409024484 26.993294828387437 30.987670713046356 19.707393556117804 31 25.36076872198495 26.624063706096944 27.915594011325272 20.099573560592834 32 25.30351945696388 27.37014825797494 28.15749981763835 19.168832467422835 33 24.21422617598678 27.528741425928793 27.68590028874611 20.57113210933831 34 20.742347162493658 27.894899037212433 30.28576275937359 21.076991040920316 35 20.222473020720383 28.570579696960014 29.9281699987624 21.278777283557208 36 24.955229189666774 28.316420826766265 27.88395733802802 18.844392645538942 37 21.655097971236856 29.518942253236 28.637787137643294 20.18817263788385 38 20.493310810644676 30.567132447014718 27.90379172905894 21.035765013281665 39 20.72025886339104 28.321297464230476 28.848998814034555 22.109444858343927 40 23.270658296881493 26.724055264186713 28.64094260894367 21.364343829988126 41 19.894304005481505 26.376174798357187 29.290436954912824 24.439084241248484 42 21.99195477758845 26.307369131950338 28.457802333081716 23.2428737573795 43 21.72685420821029 26.383141423306068 28.984274278483046 22.9057300900006 44 21.42446170528226 27.844534436846725 28.761547180852766 21.96945667701825 45 20.861394488825944 29.00296122540474 27.13807768688381 22.997566598885506 46 22.29828137460526 28.190406875485102 27.997718225428507 21.51359352448113 47 20.914955540638783 27.80576721801356 29.451611872112437 21.82766536923522 48 21.24845197495621 27.622053220096994 29.98423083952748 21.145263965419314 49 22.449948897756993 25.467399063849527 30.138971873686078 21.943680164707406 50 20.521423191320736 28.309618122404416 29.379077012350596 21.78988167392425 51 20.15325755284595 27.740035062613565 28.31236379223721 23.79434359230327 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1849.0 1 3031.0 2 4213.0 3 13821.5 4 23430.0 5 17040.5 6 10651.0 7 10009.5 8 9368.0 9 9879.5 10 10391.0 11 10730.5 12 11070.0 13 11307.0 14 11544.0 15 11014.5 16 10485.0 17 10033.5 18 9582.0 19 9809.5 20 10037.0 21 11193.0 22 12349.0 23 12529.5 24 12710.0 25 15272.0 26 22837.5 27 27841.0 28 33253.5 29 38666.0 30 43897.0 31 49128.0 32 56344.0 33 63560.0 34 70903.5 35 78247.0 36 85442.0 37 92637.0 38 98544.0 39 104451.0 40 123110.0 41 141769.0 42 159115.5 43 176462.0 44 188730.5 45 200999.0 46 205108.0 47 209217.0 48 203434.5 49 197652.0 50 185322.5 51 172993.0 52 162437.5 53 151882.0 54 143075.5 55 134269.0 56 125589.5 57 116910.0 58 106799.0 59 96688.0 60 85335.5 61 73983.0 62 64821.5 63 55660.0 64 47951.5 65 40243.0 66 32341.0 67 24439.0 68 19669.5 69 14900.0 70 11991.0 71 9082.0 72 7304.5 73 5527.0 74 4577.0 75 2748.0 76 1869.0 77 1422.0 78 975.0 79 780.5 80 586.0 81 403.0 82 220.0 83 157.0 84 94.0 85 68.0 86 42.0 87 44.5 88 47.0 89 29.5 90 12.0 91 9.0 92 6.0 93 6.0 94 6.0 95 4.0 96 2.0 97 2.0 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2440206.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 22.89070415017695 #Duplication Level Percentage of deduplicated Percentage of total 1 76.18680337539485 17.43969576213866 2 8.831231986445294 4.0430623736659745 3 3.0565064502830257 2.0989675465960884 4 1.5085582069330667 1.38127838432905 5 0.9277056206781865 1.0617917450700325 6 0.6435031848496291 0.8838144614453693 7 0.485066689107825 0.7772462651431158 8 0.3738293301623736 0.6845773279524572 9 0.31157519157094554 0.64189579777067 >10 5.52315443953501 33.68506376654256 >50 1.9998269622294687 30.70055077775819 >100 0.1466001845539742 4.924816475463496 >500 0.0036376633912158407 0.5312957903205259 >1k 0.0018188316956079204 0.5577335951049106 >5k 0.0 0.0 >10k+ 1.8188316956079204E-4 0.5882099306988786 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 14128 0.578967513398459 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.09572962282692526 0.0 2 0.0 0.0 0.0 0.28296791336469135 0.0 3 0.0 0.0 0.0 0.4409053989704148 0.0 4 0.0 0.0 0.0 0.6642471988020684 0.0 5 0.0 0.0 0.0 1.125273849830711 0.0 6 0.0 0.0 0.0 1.629575535835909 0.0 7 0.0 0.0 0.0 1.9100846403951142 0.0 8 0.0 0.0 0.0 2.5803559207706233 0.0 9 0.0 0.0 0.0 2.8138198168515283 0.0 10 0.0 0.0 0.0 3.242554112234787 0.0 11 0.0 0.0 0.0 3.7713619260013296 0.0 12 0.0 0.0 0.0 4.230257609398551 0.0 13 0.0 0.0 0.0 4.440772623294919 0.0 14 0.0 0.0 0.0 4.53183050939142 0.0 15 0.0 0.0 0.0 4.674769261283679 0.0 16 0.0 0.0 0.0 4.956466790098869 0.0 17 0.0 0.0 0.0 5.305166858863555 0.0 18 0.0 0.0 0.0 5.730171960891826 0.0 19 0.0 0.0 0.0 5.959087060682582 0.0 20 0.0 0.0 0.0 6.220868238173335 0.0 21 0.0 0.0 0.0 6.544857278442885 0.0 22 0.0 0.0 0.0 6.891549320016425 0.0 23 0.0 0.0 0.0 7.268812551071508 0.0 24 0.0 0.0 0.0 7.549321655630713 0.0 25 0.0 0.0 0.0 7.7956123376469035 0.0 26 0.0 0.0 0.0 8.044197907881548 0.0 27 0.0 0.0 0.0 8.305610264051477 0.0 28 0.0 0.0 0.0 8.57648903412253 0.0 29 0.0 0.0 0.0 8.874701562081235 0.0 30 0.0 0.0 0.0 9.23766272191774 0.0 31 0.0 0.0 0.0 9.549480658600135 0.0 32 0.0 0.0 0.0 9.833268174899988 0.0 33 0.0 0.0 0.0 10.13545577709423 0.0 34 0.0 0.0 0.0 10.449281740967772 0.0 35 0.0 0.0 0.0 10.812406821391308 0.0 36 0.0 0.0 0.0 11.119184200022458 0.0 37 4.098014675810157E-5 0.0 0.0 11.436329555783406 0.0 38 4.098014675810157E-5 0.0 0.0 11.797528569309312 0.0 39 4.098014675810157E-5 0.0 0.0 12.276627465058278 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGTCTA 520 0.0 41.538464 31 CGTTTTT 7290 0.0 40.956787 1 CGACGGT 530 0.0 40.75472 28 TACGTAG 125 0.0 39.6 1 CACGACG 540 0.0 39.583332 26 GGGCGAT 3885 0.0 39.49807 7 GTAATCG 40 3.4603545E-7 39.375 1 AGGGCGA 1975 0.0 39.3038 6 ACACGAC 530 0.0 38.632076 26 TACGGGA 1330 0.0 38.57143 4 CGTTAGG 350 0.0 38.571426 2 GGCGATA 830 0.0 38.493973 8 TGGGCGA 1155 0.0 38.18182 6 AAGGGAT 4550 0.0 37.879124 5 TATGGGA 3190 0.0 37.876175 4 ATAGGGA 4200 0.0 37.875 4 TAAGGGA 4235 0.0 37.774498 4 AGGGATT 4910 0.0 37.53055 6 CACGACC 540 0.0 37.5 27 GCGATAT 180 0.0 37.5 9 >>END_MODULE