SRR1547955_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547955_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	2408841
Sequences flagged as poor quality	0
Sequence length	51
%GC	41

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	43399	1.8016548207208363	No Hit
CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3639	0.1510685014079385	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	3180	0.13201369455269152	No Hit
CGTTTCTGTCTCTTATACACATCTGACGCTGCCCAGATCGTATGCCGTCTT	2647	0.10988687090596683	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCCGCTA	25	3.892082E-5	45.000004	28
ATATCCG	25	3.892082E-5	45.000004	1
GCCCGAC	25	3.892082E-5	45.000004	9
CGGTACG	20	7.0348283E-4	45.0	29
CGCTAGG	120	0.0	44.999996	2
GTCCGTT	30	2.1664982E-6	44.999996	9
CGACGGT	680	0.0	44.338234	28
CGTTTTT	16735	0.0	43.776516	1
CGGTCTA	675	0.0	43.666668	31
GACGGTC	690	0.0	43.04348	29
CTACGCG	90	0.0	42.500004	1
CACGACG	705	0.0	42.44681	26
TATAGCG	80	0.0	42.1875	1
ACGGTCT	705	0.0	42.127663	30
GCGCGTC	75	0.0	42.0	38
TCTCACG	735	0.0	41.326527	23
GTACGTC	115	0.0	41.08696	12
GGCGATA	685	0.0	40.729927	8
GTTAGCG	145	0.0	40.34483	1
TACGCGG	135	0.0	40.000004	2