##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547955_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2408841 Sequences flagged as poor quality 0 Sequence length 51 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.36212394259314 31.0 31.0 33.0 30.0 34.0 2 31.71886770442715 31.0 31.0 34.0 30.0 34.0 3 31.608744205200757 31.0 31.0 34.0 30.0 34.0 4 35.52088120386526 37.0 35.0 37.0 33.0 37.0 5 35.51362252635189 37.0 35.0 37.0 33.0 37.0 6 35.60071171156585 37.0 35.0 37.0 33.0 37.0 7 35.953775280311156 37.0 35.0 37.0 35.0 37.0 8 35.98195688299892 37.0 35.0 37.0 35.0 37.0 9 37.76832883531956 39.0 38.0 39.0 35.0 39.0 10 37.24677303317238 39.0 37.0 39.0 34.0 39.0 11 36.972715509242825 39.0 37.0 39.0 33.0 39.0 12 36.50599894306017 39.0 35.0 39.0 32.0 39.0 13 36.34852777746642 39.0 35.0 39.0 32.0 39.0 14 37.42262108624023 40.0 35.0 41.0 32.0 41.0 15 37.61210100625156 40.0 35.0 41.0 33.0 41.0 16 37.69035897346483 40.0 35.0 41.0 33.0 41.0 17 37.62926652278004 40.0 35.0 41.0 33.0 41.0 18 37.48352838564272 39.0 36.0 41.0 33.0 41.0 19 37.3519115624485 39.0 36.0 41.0 32.0 41.0 20 37.134044131596895 39.0 35.0 41.0 32.0 41.0 21 37.01718378257428 39.0 35.0 41.0 32.0 41.0 22 36.93551629185986 38.0 35.0 41.0 32.0 41.0 23 36.82069551290434 38.0 35.0 41.0 32.0 41.0 24 36.77060378829487 38.0 35.0 41.0 32.0 41.0 25 36.770474680562145 38.0 35.0 41.0 32.0 41.0 26 36.667689150093345 38.0 35.0 41.0 31.0 41.0 27 36.58978155884925 38.0 35.0 40.0 31.0 41.0 28 36.53107282713969 38.0 35.0 40.0 31.0 41.0 29 36.50887459985943 38.0 35.0 40.0 31.0 41.0 30 36.3972732114739 38.0 35.0 40.0 31.0 41.0 31 36.20466481598412 38.0 35.0 40.0 30.0 41.0 32 35.94982275708525 38.0 35.0 40.0 30.0 41.0 33 35.720081981334594 38.0 35.0 40.0 29.0 41.0 34 35.466626481365935 38.0 35.0 40.0 27.0 41.0 35 35.27532618383696 38.0 34.0 40.0 26.0 41.0 36 35.12926590007394 38.0 34.0 40.0 25.0 41.0 37 35.00943939429792 38.0 34.0 40.0 24.0 41.0 38 34.8799210906822 38.0 34.0 40.0 24.0 41.0 39 34.80628982983933 38.0 34.0 40.0 24.0 41.0 40 34.65373223056233 38.0 34.0 40.0 23.0 41.0 41 34.544707184907594 37.0 34.0 40.0 23.0 41.0 42 34.53927594224775 37.0 34.0 40.0 23.0 41.0 43 34.47500852069522 37.0 34.0 40.0 23.0 41.0 44 34.34733840880324 37.0 34.0 40.0 23.0 41.0 45 34.238326232408035 37.0 33.0 40.0 23.0 41.0 46 34.187299618364186 37.0 33.0 40.0 23.0 41.0 47 34.12651644504556 37.0 33.0 40.0 23.0 41.0 48 33.97995550557301 36.0 33.0 40.0 22.0 41.0 49 33.85639732967016 36.0 33.0 40.0 21.0 41.0 50 33.75256233184341 36.0 33.0 40.0 20.0 41.0 51 33.46905378976861 35.0 33.0 40.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 0.0 10 2.0 11 1.0 12 0.0 13 7.0 14 26.0 15 56.0 16 167.0 17 372.0 18 870.0 19 1825.0 20 3416.0 21 5557.0 22 8974.0 23 13963.0 24 21852.0 25 33826.0 26 44885.0 27 49097.0 28 49818.0 29 52512.0 30 58806.0 31 70005.0 32 86279.0 33 110818.0 34 181151.0 35 268137.0 36 188690.0 37 231111.0 38 337703.0 39 588807.0 40 107.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.838440561249165 24.234227165678433 28.617413934751195 16.309918338321207 2 33.24403727767835 25.545148060830915 29.138785000753476 12.07202966073726 3 27.0231202474551 25.189541360347157 35.03946503733538 12.74787335486236 4 23.741957231714338 27.173773611458792 35.061550347241685 14.022718809585191 5 21.906800822470228 31.595236049203745 33.46924931948601 13.02871380884002 6 19.753981271491146 40.29145136603039 29.938837806231295 10.015729556247175 7 85.61353779680768 2.9484718999718122 10.099213688242603 1.3387766149779083 8 86.15201252386521 2.425938449237621 9.728620527465283 1.6934284994318842 9 81.41703831842783 5.5062579888004235 11.068808609617655 2.007895083154098 10 37.32317741187567 38.50075617278185 15.58566962286012 8.59039679248236 11 29.68406798124077 22.902881510236668 31.385757715017306 16.027292793505257 12 29.089051539723876 22.964986065913028 31.801476311637007 16.144486082726093 13 21.77366625692605 30.718175255236858 32.21939513649925 15.288763351337842 14 16.310624071908443 34.76123994900452 32.45814065768558 16.469995321401456 15 14.995344234011293 28.641948555342587 41.327219189643486 15.035488021002633 16 18.605586670104003 26.443546917376448 39.553295547526794 15.39757086499275 17 18.449495006104595 26.158721144317955 31.875370769594173 23.516413079983277 18 19.675437274606335 27.776594636175655 35.09804092507559 17.449927164142423 19 21.834483886649224 29.37068075476962 30.687828710985904 18.107006647595256 20 23.01621402159794 29.22322394877869 30.14217210683478 17.618389922788595 21 21.044851030018172 28.63144557901497 33.39805325465649 16.925650136310367 22 20.298433977169932 26.09653356116074 32.495586051549274 21.109446410120054 23 16.825602021885214 30.559011574445964 32.11573532665709 20.499651077011723 24 17.345976758117285 29.34797273875694 36.508885393431946 16.797165109693832 25 17.753724716575316 30.297475009766107 33.720324421578674 18.2284758520799 26 16.965254244676174 33.66220518498315 30.419234810433732 18.953305759906943 27 16.76138026544716 33.004378454202666 33.21132445022316 17.02291683012702 28 15.60688314421749 30.91038387340634 36.0521927350124 17.430540247363773 29 16.288331193300014 28.615794898874604 35.59641337888221 19.49946052894317 30 18.233374473450095 30.463903595131438 33.89891653288864 17.40380539852983 31 22.534447063961466 29.573890514151824 29.829241531508305 18.0624208903784 32 22.50327024490201 29.794577558253117 30.49520495541217 17.206947241432704 33 21.238595656583396 30.025726064941605 29.402521793675877 19.333156484799122 34 17.553711515205862 30.79451902387912 30.797424985708894 20.854344475206126 35 17.691163509754276 30.751095651394177 30.59193197060329 20.965808868248256 36 22.91188999190897 29.84439404676357 28.77504160714634 18.46867435418112 37 18.18816601012686 33.34126245775458 29.987201313826855 18.4833702182917 38 18.699200154763222 33.25545355629533 27.676754090452626 20.368592198488816 39 17.97520052174469 32.622825665953044 29.386663544833386 20.015310267468877 40 20.194857194808623 30.8119963085982 28.934869507784033 20.05827698880914 41 17.453829455742408 29.74364019875118 30.139183117524155 22.663347227982253 42 19.50236649077295 30.39046578831895 28.67980908661053 21.427358634297573 43 19.541140324330247 30.290874325038473 29.227333809080797 20.94065154155048 44 18.49271080988741 32.67504995140817 29.10067538704298 19.731563851661445 45 17.36926596649592 34.65446660863046 26.961679911625545 21.014587513248074 46 20.39092659083767 32.73686391090155 27.85796156740939 19.014247930851393 47 19.24502281387605 31.7869049887477 28.827058323899337 20.14101387347691 48 19.81745578060154 30.875221735266045 29.581072391245417 19.726250092886993 49 19.619684321215058 29.35843420134413 29.75530555981071 21.266575917630096 50 18.57042453196371 31.932784272602465 29.426433708160893 20.070357487272926 51 17.486957420601858 32.52414750496193 28.44625278297737 21.54264229145884 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1955.0 1 2906.0 2 3857.0 3 30751.0 4 57645.0 5 39672.5 6 21700.0 7 20476.5 8 19253.0 9 21607.0 10 23961.0 11 26084.5 12 28208.0 13 29370.0 14 30532.0 15 28910.0 16 27288.0 17 26147.5 18 25007.0 19 23533.0 20 22059.0 21 21831.0 22 21603.0 23 21614.5 24 21626.0 25 24721.5 26 31140.5 27 34464.0 28 39209.5 29 43955.0 30 52714.0 31 61473.0 32 67245.5 33 73018.0 34 81689.0 35 90360.0 36 93546.5 37 96733.0 38 107412.0 39 118091.0 40 133521.5 41 148952.0 42 164516.5 43 180081.0 44 183993.0 45 187905.0 46 186489.5 47 185074.0 48 189046.0 49 193018.0 50 185367.0 51 177716.0 52 160564.0 53 143412.0 54 123274.0 55 103136.0 56 90866.5 57 78597.0 58 67502.5 59 56408.0 60 47072.0 61 37736.0 62 31520.5 63 25305.0 64 22103.0 65 18901.0 66 14350.5 67 9800.0 68 7349.5 69 4899.0 70 4007.0 71 3115.0 72 2490.0 73 1865.0 74 1468.5 75 799.0 76 526.0 77 415.0 78 304.0 79 237.5 80 171.0 81 141.0 82 111.0 83 84.5 84 58.0 85 39.5 86 21.0 87 22.0 88 23.0 89 22.5 90 22.0 91 14.0 92 6.0 93 4.0 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2408841.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 24.204849349327777 #Duplication Level Percentage of deduplicated Percentage of total 1 74.95019919838394 18.14158280298991 2 8.818811715842813 4.269160180441242 3 3.568267660261384 2.5910814346411533 4 2.1248778170994873 2.0572938979448625 5 1.483013165489388 1.794805512687017 6 1.025333000312712 1.4890818483278063 7 0.7198568058945944 1.2196817877836863 8 0.5676921702467015 1.0992722766091478 9 0.4594542913335586 1.0008919714167848 >10 4.554401121301564 25.70853024972611 >50 1.2598182277058996 21.316416708174053 >100 0.46077555201494164 15.639653865784478 >500 0.004534444812522531 0.6919243379096267 >1k 0.0027904275769369425 1.1485918681095133 >5k 0.0 0.0 >10k+ 1.744017235585589E-4 1.832031257454694 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 43399 1.8016548207208363 No Hit CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3639 0.1510685014079385 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 3180 0.13201369455269152 No Hit CGTTTCTGTCTCTTATACACATCTGACGCTGCCCAGATCGTATGCCGTCTT 2647 0.10988687090596683 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 8.302748085074939E-5 0.0 0.0 0.06351602285082328 0.0 2 8.302748085074939E-5 0.0 0.0 0.20159072350561952 0.0 3 8.302748085074939E-5 0.0 0.0 0.3325665745476767 0.0 4 8.302748085074939E-5 0.0 0.0 0.49401351106195884 0.0 5 8.302748085074939E-5 0.0 0.0 0.9349724618602888 0.0 6 8.302748085074939E-5 0.0 0.0 1.539703118636722 0.0 7 8.302748085074939E-5 0.0 0.0 1.9407258511458414 0.0 8 8.302748085074939E-5 0.0 0.0 2.6951135421557506 0.0 9 8.302748085074939E-5 0.0 0.0 3.0724734426224063 0.0 10 8.302748085074939E-5 0.0 0.0 3.575453921616246 0.0 11 8.302748085074939E-5 0.0 0.0 4.1126417227205945 0.0 12 8.302748085074939E-5 0.0 0.0 4.517068581944595 0.0 13 8.302748085074939E-5 0.0 0.0 4.694290739820519 0.0 14 8.302748085074939E-5 0.0 0.0 4.781428080973381 0.0 15 8.302748085074939E-5 0.0 0.0 4.88762022898149 0.0 16 8.302748085074939E-5 0.0 0.0 5.077379536465878 0.0 17 8.302748085074939E-5 0.0 0.0 5.343067475188275 0.0 18 8.302748085074939E-5 0.0 0.0 5.632584300914838 0.0 19 8.302748085074939E-5 0.0 0.0 5.812421824437561 0.0 20 8.302748085074939E-5 0.0 0.0 5.9980297578794115 0.0 21 8.302748085074939E-5 8.302748085074939E-5 0.0 6.225815651593443 0.0 22 8.302748085074939E-5 8.302748085074939E-5 0.0 6.5017159704604826 0.0 23 8.302748085074939E-5 8.302748085074939E-5 0.0 6.788451375578546 0.0 24 8.302748085074939E-5 8.302748085074939E-5 0.0 7.007602411284099 0.0 25 8.302748085074939E-5 8.302748085074939E-5 0.0 7.195659655411046 0.0 26 8.302748085074939E-5 8.302748085074939E-5 0.0 7.383675385797568 0.0 27 8.302748085074939E-5 8.302748085074939E-5 0.0 7.589168400903173 0.0 28 8.302748085074939E-5 8.302748085074939E-5 0.0 7.795035039672606 0.0 29 8.302748085074939E-5 8.302748085074939E-5 0.0 8.023941804378122 0.0 30 8.302748085074939E-5 8.302748085074939E-5 0.0 8.30237446141111 0.0 31 8.302748085074939E-5 8.302748085074939E-5 0.0 8.54938121694209 0.0 32 8.302748085074939E-5 8.302748085074939E-5 0.0 8.770940049592314 0.0 33 8.302748085074939E-5 8.302748085074939E-5 0.0 9.005700251697808 0.0 34 8.302748085074939E-5 8.302748085074939E-5 0.0 9.25457512554793 0.0 35 8.302748085074939E-5 8.302748085074939E-5 0.0 9.531347232963903 0.0 36 8.302748085074939E-5 8.302748085074939E-5 0.0 9.786283112916129 0.0 37 8.302748085074939E-5 8.302748085074939E-5 0.0 10.047529081413012 0.0 38 8.302748085074939E-5 8.302748085074939E-5 0.0 10.33206425828853 0.0 39 8.302748085074939E-5 8.302748085074939E-5 0.0 10.704317968682865 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCCGCTA 25 3.892082E-5 45.000004 28 ATATCCG 25 3.892082E-5 45.000004 1 GCCCGAC 25 3.892082E-5 45.000004 9 CGGTACG 20 7.0348283E-4 45.0 29 CGCTAGG 120 0.0 44.999996 2 GTCCGTT 30 2.1664982E-6 44.999996 9 CGACGGT 680 0.0 44.338234 28 CGTTTTT 16735 0.0 43.776516 1 CGGTCTA 675 0.0 43.666668 31 GACGGTC 690 0.0 43.04348 29 CTACGCG 90 0.0 42.500004 1 CACGACG 705 0.0 42.44681 26 TATAGCG 80 0.0 42.1875 1 ACGGTCT 705 0.0 42.127663 30 GCGCGTC 75 0.0 42.0 38 TCTCACG 735 0.0 41.326527 23 GTACGTC 115 0.0 41.08696 12 GGCGATA 685 0.0 40.729927 8 GTTAGCG 145 0.0 40.34483 1 TACGCGG 135 0.0 40.000004 2 >>END_MODULE