##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547953_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1957291 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.378510400344148 31.0 31.0 33.0 30.0 34.0 2 31.781905194475424 31.0 31.0 34.0 30.0 34.0 3 31.897628916701706 31.0 31.0 34.0 30.0 34.0 4 35.66654524033473 37.0 35.0 37.0 33.0 37.0 5 35.580554960912814 37.0 35.0 37.0 33.0 37.0 6 35.63397113663732 37.0 35.0 37.0 33.0 37.0 7 35.93146701231447 37.0 35.0 37.0 35.0 37.0 8 35.93632423589543 37.0 35.0 37.0 35.0 37.0 9 37.703626083193555 39.0 37.0 39.0 35.0 39.0 10 37.17064197403452 39.0 37.0 39.0 33.0 39.0 11 36.951417545985755 39.0 37.0 39.0 33.0 39.0 12 36.32303934366428 38.0 35.0 39.0 32.0 39.0 13 36.091223022023804 38.0 35.0 39.0 32.0 39.0 14 37.040748667418384 39.0 35.0 41.0 31.0 41.0 15 37.269378952848605 39.0 35.0 41.0 32.0 41.0 16 37.396193003493096 39.0 35.0 41.0 32.0 41.0 17 37.356941813966344 39.0 35.0 41.0 32.0 41.0 18 37.284660277904514 39.0 35.0 41.0 32.0 41.0 19 37.23015279792325 39.0 35.0 41.0 32.0 41.0 20 37.07416934937115 39.0 35.0 41.0 32.0 41.0 21 36.950632787868535 39.0 35.0 41.0 32.0 41.0 22 36.884498523724886 38.0 35.0 41.0 31.0 41.0 23 36.778908705961456 38.0 35.0 41.0 31.0 41.0 24 36.7287633775458 38.0 35.0 41.0 31.0 41.0 25 36.75708313173667 38.0 35.0 41.0 31.0 41.0 26 36.652984150031855 38.0 35.0 41.0 31.0 41.0 27 36.5921424049873 38.0 35.0 41.0 31.0 41.0 28 36.54988808511356 38.0 35.0 40.0 31.0 41.0 29 36.54371782223492 38.0 35.0 40.0 31.0 41.0 30 36.464953346232114 38.0 35.0 40.0 31.0 41.0 31 36.32072747486194 38.0 35.0 40.0 30.0 41.0 32 36.19990640124539 38.0 35.0 40.0 30.0 41.0 33 36.08984203166519 38.0 35.0 40.0 30.0 41.0 34 35.95607040547369 38.0 35.0 40.0 30.0 41.0 35 35.89081490693004 38.0 35.0 40.0 30.0 41.0 36 35.76853518459953 38.0 35.0 40.0 29.0 41.0 37 35.65428594930442 38.0 35.0 40.0 29.0 41.0 38 35.5372389695758 38.0 34.0 40.0 28.0 41.0 39 35.48487731257131 38.0 34.0 40.0 28.0 41.0 40 35.32252690070102 38.0 34.0 40.0 27.0 41.0 41 35.21457514493246 38.0 34.0 40.0 26.0 41.0 42 35.2044458386617 38.0 34.0 40.0 27.0 41.0 43 35.15380186185907 38.0 34.0 40.0 27.0 41.0 44 35.013396577207985 37.0 34.0 40.0 26.0 41.0 45 34.91904576274044 37.0 34.0 40.0 26.0 41.0 46 34.874303820944355 37.0 34.0 40.0 26.0 41.0 47 34.79472546494108 37.0 34.0 40.0 26.0 41.0 48 34.665706836643096 37.0 34.0 40.0 25.0 41.0 49 34.53528320520556 36.0 34.0 40.0 24.0 41.0 50 34.43426194674169 36.0 34.0 40.0 24.0 41.0 51 34.087366671588434 36.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 4.0 11 0.0 12 8.0 13 15.0 14 24.0 15 68.0 16 141.0 17 357.0 18 839.0 19 1508.0 20 2678.0 21 4138.0 22 6470.0 23 9466.0 24 13866.0 25 20211.0 26 26337.0 27 30878.0 28 34419.0 29 39408.0 30 47809.0 31 58349.0 32 72292.0 33 94787.0 34 161430.0 35 225161.0 36 143760.0 37 184158.0 38 286506.0 39 492142.0 40 61.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.25258788805548 24.842550239080445 29.854988348692146 13.049873524171929 2 31.276238433630972 26.161311731367487 29.70171527892378 12.860734556077762 3 29.0973595648271 26.340692314019737 30.98139213841989 13.580555982733278 4 26.330423018345257 27.74957837133058 30.693851859534426 15.22614675078974 5 23.06391844646504 32.792160184663395 29.34484448147976 14.799076887391807 6 22.43095175934493 41.3021364733195 25.99521481476183 10.271696952573736 7 89.30051790970275 3.4296382091370163 5.730113713290462 1.539730167869775 8 89.77157714412421 2.787475137830808 5.484927892684328 1.9560198253606644 9 84.42234700920814 5.879095137105315 6.9795446870189455 2.719013166667603 10 39.851866687171196 36.82038082226914 12.881630784589518 10.446121705970139 11 37.27131019352768 22.719258403579232 24.36673953949617 15.64269186339691 12 34.807598870070926 22.472028942042854 26.60207398899806 16.118298198888155 13 24.685445342567867 31.398141615120085 27.42714292356119 16.489270118750866 14 17.753108761037577 35.55184180584287 29.40334370310802 17.29170573001153 15 16.736703944380267 27.77405097147026 39.58435408940214 15.904890994747332 16 21.153573995895346 24.527063170473884 37.01457780166567 17.304785031965096 17 21.055530322266847 24.503867845915607 27.780181894261 26.66041993755655 18 22.3317840832048 26.72571426527788 31.42894950214352 19.5135521493738 19 25.894258952807732 27.656592709004435 26.86943331369735 19.579715024490483 20 26.49176846978809 28.256963323287138 26.263698141972757 18.987570064952017 21 23.473208633769836 27.521405861468732 30.219829345764122 18.78555615899731 22 23.00383540311584 24.731784900661168 28.927584094547004 23.336795601675988 23 19.791793862026648 29.25982901878157 28.39041307603213 22.557964043159654 24 19.932702904167034 27.996858923890212 33.45608803187671 18.61435014006604 25 20.209411886122197 29.025985405338297 30.690275487906497 20.074327220633005 26 19.09154029727823 32.79757583312855 26.707270405882415 21.403613463710812 27 18.869038890997814 32.61140014438323 29.35250813496818 19.16705282965078 28 17.115594972847674 29.849572700226997 33.210238027968245 19.82459429895708 29 18.553551822391253 28.10072697416991 32.30817492135814 21.03754628208069 30 20.67490219900873 29.801189501203453 30.35741747139286 19.16649082839496 31 25.413901152153667 28.237242188310276 26.89947483537195 19.449381824164114 32 26.43730543899706 28.120754655286312 26.77430182839445 18.667638077322177 33 25.010792978662856 28.143030341425977 26.870966044395033 19.97521063551613 34 20.361867499518468 28.44426301454408 29.637034043481524 21.556835442455924 35 20.78888627189314 28.701250861522382 29.014541016128923 21.495321850455554 36 26.944179480721058 26.83939179202275 27.845731677098602 18.370697050157588 37 21.72466945385229 30.3181284745089 29.15258896096697 18.80461311067184 38 21.308992888640475 30.510792723207743 26.59016978057938 21.590044607572406 39 21.086695846453082 29.338662467665767 28.208835579379866 21.36580610650128 40 23.198900929907715 26.95730987369788 27.755556021051547 22.088233175342857 41 19.53373310355997 26.276419806763535 28.73430675356909 25.455540336107408 42 21.706021230363802 27.420960909747194 27.2712131205835 23.6018047393055 43 22.148418400738574 27.520230767933846 27.8753133795639 22.456037451763688 44 21.273280263384443 30.1641912214382 27.375796445188783 21.18673206998857 45 19.405341362117333 32.38046871926555 24.875044129871338 23.33914578874577 46 21.967556178411897 30.118822392786765 27.44660860342177 20.46701282537957 47 21.44555919380409 28.058372515890582 29.171083911385686 21.32498437891964 48 21.75813407408505 27.701808264586102 29.681687597807375 20.85837006352147 49 22.11526032664535 26.03424835652951 29.672031394411967 22.17845992241317 50 20.399215037518694 29.889525880413288 28.31372545012469 21.397533631943332 51 19.52698908849016 30.459957155067897 26.872141137929923 23.140912618512015 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1363.0 1 2189.5 2 3016.0 3 8951.5 4 14887.0 5 10952.5 6 7018.0 7 6929.0 8 6840.0 9 7535.5 10 8231.0 11 8718.5 12 9206.0 13 9333.0 14 9460.0 15 8981.0 16 8502.0 17 8166.0 18 7830.0 19 7965.5 20 8101.0 21 8486.0 22 8871.0 23 9684.5 24 10498.0 25 13047.5 26 18952.0 27 22307.0 28 25072.5 29 27838.0 30 33781.5 31 39725.0 32 46485.5 33 53246.0 34 59445.5 35 65645.0 36 71905.5 37 78166.0 38 83792.0 39 89418.0 40 104293.5 41 119169.0 42 136824.0 43 154479.0 44 162263.5 45 170048.0 46 170934.5 47 171821.0 48 172145.0 49 172469.0 50 159617.5 51 146766.0 52 131920.0 53 117074.0 54 108361.5 55 99649.0 56 91673.0 57 83697.0 58 76836.0 59 69975.0 60 61299.5 61 52624.0 62 45774.5 63 38925.0 64 31806.5 65 24688.0 66 20506.5 67 16325.0 68 12879.0 69 9433.0 70 7659.0 71 5885.0 72 4802.0 73 3719.0 74 2846.5 75 1593.5 76 1213.0 77 955.5 78 698.0 79 574.5 80 451.0 81 323.0 82 195.0 83 157.0 84 119.0 85 92.0 86 65.0 87 46.5 88 28.0 89 21.0 90 14.0 91 13.0 92 12.0 93 11.0 94 10.0 95 5.0 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1957291.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 21.080593614767086 #Duplication Level Percentage of deduplicated Percentage of total 1 76.92961358433958 16.21721920912528 2 8.757012991724702 3.6920606431556826 3 3.000940874443212 1.8978484510824338 4 1.5206234741636016 1.2822258199967265 5 0.9443635977313745 0.9953872614177242 6 0.6660469616661527 0.842439919634071 7 0.4998476849113647 0.7375960140429038 8 0.38540969060494734 0.6499732050268808 9 0.310338867305569 0.5887914790082244 >10 4.123251073416614 22.20523100620497 >50 2.3206515705175366 35.26025801999836 >100 0.537712223007475 14.348933347347096 >500 0.0032021341283787873 0.4652506760096565 >1k 7.38954029625874E-4 0.3235984612602879 >5k 2.463180098752913E-4 0.49318648668970066 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9498 0.4852625388866551 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 3259 0.16650564479170443 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.07505271316324451 0.0 2 0.0 0.0 0.0 0.2439085450247306 0.0 3 0.0 0.0 0.0 0.3838979487465073 0.0 4 0.0 0.0 0.0 0.6129900970269623 0.0 5 0.0 0.0 0.0 1.0805751418669989 0.0 6 0.0 0.0 0.0 1.5724795137769498 0.0 7 0.0 0.0 0.0 1.8491374047088553 0.0 8 0.0 0.0 0.0 2.4138464847587815 0.0 9 0.0 0.0 0.0 2.6459019123880916 0.0 10 0.0 0.0 0.0 3.058666289274308 0.0 11 0.0 0.0 0.0 3.5919032989984627 0.0 12 0.0 0.0 0.0 4.016674066349868 0.0 13 0.0 0.0 0.0 4.195237192630017 0.0 14 0.0 0.0 0.0 4.2732020941188615 0.0 15 0.0 0.0 0.0 4.389689627142821 0.0 16 0.0 0.0 0.0 4.650049481656024 0.0 17 0.0 0.0 0.0 4.94974942407644 0.0 18 0.0 0.0 0.0 5.303759124218116 0.0 19 0.0 0.0 0.0 5.511546315800768 0.0 20 0.0 0.0 0.0 5.730420259429998 0.0 21 0.0 0.0 0.0 6.008355425943306 0.0 22 0.0 0.0 0.0 6.300238441805536 0.0 23 0.0 0.0 0.0 6.607346582598091 0.0 24 0.0 0.0 0.0 6.83981073841345 0.0 25 0.0 0.0 0.0 7.039372275251866 0.0 26 0.0 0.0 0.0 7.232802889299547 0.0 27 0.0 0.0 0.0 7.451523559859009 0.0 28 0.0 0.0 0.0 7.666259130604494 0.0 29 0.0 0.0 0.0 7.912415680652494 0.0 30 0.0 0.0 0.0 8.218450909956669 0.0 31 0.0 0.0 0.0 8.480496768237323 0.0 32 0.0 0.0 0.0 8.714084926564318 0.0 33 0.0 0.0 0.0 8.953599643589023 0.0 34 0.0 0.0 0.0 9.209514579078942 0.0 35 5.109102325612288E-4 0.0 0.0 9.518053268522667 0.0 36 5.109102325612288E-4 0.0 0.0 9.780661128059139 0.0 37 5.109102325612288E-4 0.0 0.0 10.0573701100143 0.0 38 5.109102325612288E-4 0.0 0.0 10.371477720992944 0.0 39 5.109102325612288E-4 0.0 0.0 10.872118657879692 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTATGCG 35 1.2125201E-7 45.000004 1 CCGTATC 35 1.2125201E-7 45.000004 22 CGGTACG 25 3.891815E-5 45.0 6 TACCGGA 20 7.034504E-4 45.0 3 TCTAGCG 85 0.0 42.35294 1 CGGTCTA 415 0.0 41.746986 31 ACGGTCT 415 0.0 41.746986 30 CACGACG 415 0.0 41.20482 26 CGACGGT 435 0.0 40.862072 28 CGTTTTT 5075 0.0 40.522167 1 TCACGAC 430 0.0 40.2907 25 TAAGGGA 2720 0.0 39.7886 4 TAACGCG 80 0.0 39.375 1 TATTACG 40 3.4598816E-7 39.375 1 TACGGGA 1120 0.0 39.17411 4 GCGATAT 225 0.0 39.0 9 TCGATAG 110 0.0 38.863636 1 ATGGGAC 1640 0.0 38.689026 5 TTAGGGA 2605 0.0 38.608444 4 CGTAGCA 35 6.2505387E-6 38.57143 10 >>END_MODULE