##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547950_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3185929 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.38379951342293 31.0 31.0 33.0 30.0 34.0 2 31.776682405665664 31.0 31.0 34.0 30.0 34.0 3 31.78831574714942 31.0 31.0 34.0 30.0 34.0 4 35.62501926439666 37.0 35.0 37.0 33.0 37.0 5 35.56050244685302 37.0 35.0 37.0 33.0 37.0 6 35.63450378209935 37.0 35.0 37.0 33.0 37.0 7 35.95746295664467 37.0 35.0 37.0 35.0 37.0 8 35.97335094410453 37.0 35.0 37.0 35.0 37.0 9 37.74030871372212 39.0 38.0 39.0 35.0 39.0 10 37.22274413522712 39.0 37.0 39.0 34.0 39.0 11 36.99431280483652 39.0 37.0 39.0 33.0 39.0 12 36.64991404390995 39.0 35.0 39.0 32.0 39.0 13 36.540011720286294 39.0 35.0 39.0 32.0 39.0 14 37.596204749070054 40.0 36.0 41.0 32.0 41.0 15 37.75593712226481 40.0 36.0 41.0 33.0 41.0 16 37.81692561259212 40.0 36.0 41.0 33.0 41.0 17 37.754753793948325 40.0 36.0 41.0 33.0 41.0 18 37.626959985611734 39.0 36.0 41.0 33.0 41.0 19 37.54650056545516 39.0 36.0 41.0 32.0 41.0 20 37.374968494275926 39.0 35.0 41.0 32.0 41.0 21 37.27749708169893 39.0 35.0 41.0 32.0 41.0 22 37.22302474411702 39.0 35.0 41.0 32.0 41.0 23 37.07331048494803 39.0 35.0 41.0 32.0 41.0 24 37.04672200792924 39.0 35.0 41.0 32.0 41.0 25 37.09154535458888 39.0 35.0 41.0 32.0 41.0 26 37.0095124530396 39.0 35.0 41.0 32.0 41.0 27 36.95712114111771 39.0 35.0 41.0 31.0 41.0 28 36.89067552980622 39.0 35.0 41.0 31.0 41.0 29 36.87365255157915 39.0 35.0 41.0 31.0 41.0 30 36.788899878183095 39.0 35.0 41.0 31.0 41.0 31 36.61790548376941 39.0 35.0 41.0 31.0 41.0 32 36.472259111863444 39.0 35.0 41.0 30.0 41.0 33 36.30303657112258 39.0 35.0 41.0 30.0 41.0 34 36.12553606812958 39.0 35.0 41.0 30.0 41.0 35 35.993023385015796 39.0 35.0 41.0 29.0 41.0 36 35.903806393676696 39.0 35.0 41.0 29.0 41.0 37 35.815532298428494 39.0 35.0 41.0 28.0 41.0 38 35.701332955003075 38.0 35.0 41.0 27.0 41.0 39 35.62239145944558 38.0 35.0 40.0 27.0 41.0 40 35.493942583152354 38.0 35.0 40.0 26.0 41.0 41 35.38271129080403 38.0 35.0 40.0 26.0 41.0 42 35.372106534703065 38.0 35.0 40.0 26.0 41.0 43 35.31230827805641 38.0 34.0 40.0 26.0 41.0 44 35.140600433970754 38.0 34.0 40.0 25.0 41.0 45 35.03668537497226 38.0 34.0 40.0 24.0 41.0 46 34.99736560356492 38.0 34.0 40.0 24.0 41.0 47 34.941977049708264 38.0 34.0 40.0 24.0 41.0 48 34.8182005939241 38.0 34.0 40.0 24.0 41.0 49 34.68322646235996 38.0 34.0 40.0 24.0 41.0 50 34.60379311654466 37.0 34.0 40.0 24.0 41.0 51 34.29574984251062 37.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 5.0 11 5.0 12 6.0 13 5.0 14 24.0 15 58.0 16 186.0 17 435.0 18 1017.0 19 2010.0 20 3618.0 21 5984.0 22 9519.0 23 14663.0 24 22520.0 25 34574.0 26 47275.0 27 54694.0 28 58198.0 29 63463.0 30 72692.0 31 88315.0 32 108243.0 33 139915.0 34 218076.0 35 288237.0 36 237825.0 37 316753.0 38 502324.0 39 895164.0 40 126.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.912920846635313 24.377316631977674 29.047288875552468 14.662473645834542 2 32.72276312497861 24.852782343862653 29.09198541461533 13.3324691165434 3 28.244665841580275 25.28590561811013 33.10849049052882 13.36093804978077 4 25.777065339497522 27.126844320761702 32.663125888869466 14.432964450871316 5 23.287461836092394 31.99355666745869 30.60689676386385 14.112084732585064 6 21.764515153978635 40.5068976741164 27.278448452554972 10.450138719349992 7 87.57169415890938 2.7772119215462743 7.912385994791473 1.7387079247528743 8 88.08174946773767 2.014859715957261 7.840036610985367 2.0633542053197043 9 82.45190021497653 5.322215278494906 9.507776224768348 2.7181082817602022 10 34.32261045365418 41.642861469919765 14.425556878386178 9.608971198039882 11 28.95707970893262 23.230429805560636 30.791301375517154 17.02118910998958 12 28.812663433491455 21.84885476104458 31.052041649390176 18.286440156073784 13 24.154963905347547 25.172218213274682 32.425549973022 18.247267908355774 14 18.073064402879034 29.73242655438963 32.93711190676252 19.25739713596882 15 17.537270918466795 27.137045426938265 37.80024601929296 17.52543763530198 16 22.124002135640815 25.98971916825516 34.85090220152426 17.03537649457976 17 21.828891980957515 25.19199266524772 30.68310687400755 22.296008479787215 18 21.970891378935313 25.93146300498222 33.20773940662205 18.88990620946041 19 23.319948435762377 27.127032648875726 30.253028237603534 19.299990677758355 20 24.425277525017037 27.70416415431731 29.99272739599658 17.87783092466907 21 23.676641883733126 26.134229607753344 32.591341489405444 17.597787019108086 22 23.00092061059741 23.002521399566657 32.4223483950835 21.574209594752425 23 19.106609092669675 27.331933636939176 32.27325530481062 21.288201965580527 24 19.120325656974778 26.827590947569767 34.54854141445086 19.5035419810046 25 20.29018851330334 27.84989872655668 31.775598263489236 20.08431449665074 26 19.493466426904053 29.784907322165687 29.928695837226755 20.792930413703505 27 19.095215241770923 28.75619638730179 32.19478525729858 19.95380311362871 28 17.621390809399706 28.22313366054297 34.088581383954256 20.066894146103067 29 19.0057907756262 27.01893231142314 32.93168177947469 21.043595133475982 30 20.54308178242516 27.192884712747833 32.47777963664601 19.786253868180992 31 22.53273691912155 27.757429622568488 30.318158377038536 19.39167508127143 32 23.24477413024584 27.320665338116452 30.134601241898363 19.299959289739352 33 22.105389040370955 27.549138728452515 30.14411181165682 20.201360419519705 34 19.800001820505102 27.168778714152136 32.230159554717005 20.801059910625757 35 18.97264502755711 28.154236958827394 31.891388665598008 20.981729348017485 36 22.37724067297168 27.14423328329037 30.147030897424266 20.33149514631368 37 20.041658178823194 28.93269121816588 31.039423665750242 19.98622693726069 38 20.128320499295498 28.626689420887914 29.948972497503867 21.296017582312725 39 19.803611442690656 27.268843718739493 30.16693090147332 22.760613937096526 40 21.464665408425613 26.48304466295388 30.538313942338323 21.51397598628218 41 18.93890290712693 26.4636154791899 31.059417833856312 23.538063779826857 42 20.606454192795884 27.141973345922022 29.80964108114148 22.441931380140613 43 20.671647108268893 26.914818252384155 30.346564534237896 22.06697010510906 44 20.345086158542767 28.197960469301105 29.626491990248372 21.830461381907757 45 19.191011475773628 28.654718921859214 29.37466591377272 22.77960368859444 46 20.741485450554613 28.258821838151448 29.527619730383194 21.47207298091075 47 19.839079904166102 27.455633819837168 31.256283489054525 21.449002786942206 48 20.185446693884266 27.233029989054998 31.24288080493947 21.338642512121268 49 20.765277568960265 26.093739063237127 31.37734707835611 21.7636362894465 50 19.328271282881694 26.986696815905187 31.47590545803124 22.20912644318188 51 18.996280205867738 27.50168004371723 30.174558190091496 23.327481560323534 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1608.0 1 3041.0 2 4474.0 3 26553.5 4 48633.0 5 34713.5 6 20794.0 7 18900.0 8 17006.0 9 17469.5 10 17933.0 11 17978.5 12 18024.0 13 17527.0 14 17030.0 15 16525.5 16 16021.0 17 15244.5 18 14468.0 19 14492.0 20 14516.0 21 14928.0 22 15340.0 23 18416.0 24 21492.0 25 25088.0 26 32490.0 27 36296.0 28 46475.5 29 56655.0 30 64352.5 31 72050.0 32 81666.0 33 91282.0 34 102439.5 35 113597.0 36 124219.5 37 134842.0 38 145804.0 39 156766.0 40 173808.5 41 190851.0 42 217578.0 43 244305.0 44 260548.0 45 276791.0 46 280792.5 47 284794.0 48 271334.0 49 257874.0 50 238176.5 51 218479.0 52 199000.0 53 179521.0 54 163071.5 55 146622.0 56 136883.5 57 127145.0 58 116346.5 59 105548.0 60 93339.5 61 81131.0 62 70541.5 63 59952.0 64 50413.5 65 40875.0 66 32279.0 67 23683.0 68 18556.5 69 13430.0 70 10450.5 71 7471.0 72 5751.5 73 4032.0 74 3453.5 75 2161.5 76 1448.0 77 1147.5 78 847.0 79 561.5 80 276.0 81 257.5 82 239.0 83 171.5 84 104.0 85 77.0 86 50.0 87 40.0 88 30.0 89 22.5 90 15.0 91 17.0 92 19.0 93 12.5 94 6.0 95 3.5 96 1.0 97 1.5 98 2.0 99 2.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3185929.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 23.23464525266709 #Duplication Level Percentage of deduplicated Percentage of total 1 75.52856189403214 17.548793420519466 2 8.692697631005407 4.039434914902205 3 3.117426646002463 2.1729690666323704 4 1.595190230789242 1.4825471649163273 5 1.0526917700244438 1.222945991846008 6 0.7269808433086121 1.0134685199856217 7 0.5651897877321471 0.9192388952870657 8 0.4582094937293207 0.851706803056396 9 0.3964418909646195 0.8290068029873514 >10 6.03599835625386 35.351285139648894 >50 1.5846126492400199 25.15478246488454 >100 0.2418839846101159 7.36793867866699 >500 0.0023317326409432633 0.38478403847709847 >1k 0.001645928923018772 0.6681933853527676 >5k 0.0 0.0 >10k+ 1.3716074358489764E-4 0.9929047128368784 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 31156 0.9779251201141018 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.09623566626877121 0.0 2 0.0 0.0 0.0 0.27172608052470726 0.0 3 0.0 0.0 0.0 0.44583542194443126 0.0 4 0.0 0.0 0.0 0.6715780546270805 0.0 5 0.0 0.0 0.0 1.2041071850628184 0.0 6 0.0 0.0 0.0 1.8550319231847288 0.0 7 3.1388019004817744E-5 0.0 0.0 2.2650222274256584 0.0 8 3.1388019004817744E-5 0.0 0.0 3.0666722328087035 0.0 9 3.1388019004817744E-5 0.0 0.0 3.4803663232922015 0.0 10 3.1388019004817744E-5 0.0 0.0 4.058816125531988 0.0 11 3.1388019004817744E-5 0.0 0.0 4.672985493399256 0.0 12 3.1388019004817744E-5 0.0 0.0 5.155011301256243 0.0 13 3.1388019004817744E-5 0.0 0.0 5.378462608551541 0.0 14 3.1388019004817744E-5 0.0 0.0 5.5046110569319024 0.0 15 3.1388019004817744E-5 0.0 0.0 5.648462348030982 0.0 16 3.1388019004817744E-5 0.0 0.0 5.897557666853216 0.0 17 3.1388019004817744E-5 0.0 0.0 6.227414358574846 0.0 18 3.1388019004817744E-5 0.0 0.0 6.615527213569417 0.0 19 3.1388019004817744E-5 0.0 0.0 6.858344928590688 0.0 20 3.1388019004817744E-5 0.0 0.0 7.120780155489968 0.0 21 3.1388019004817744E-5 0.0 0.0 7.425055611722672 0.0 22 3.1388019004817744E-5 0.0 0.0 7.780305210819199 0.0 23 3.1388019004817744E-5 0.0 0.0 8.138160015493126 0.0 24 3.1388019004817744E-5 0.0 0.0 8.41663452010387 0.0 25 3.1388019004817744E-5 0.0 0.0 8.660017219467226 0.0 26 3.1388019004817744E-5 0.0 0.0 8.892100231988849 0.0 27 3.1388019004817744E-5 0.0 0.0 9.14241968355227 0.0 28 3.1388019004817744E-5 0.0 0.0 9.408935352922178 0.0 29 3.1388019004817744E-5 0.0 0.0 9.69594739870223 0.0 30 3.1388019004817744E-5 0.0 0.0 10.042816396724472 0.0 31 3.1388019004817744E-5 0.0 0.0 10.34106535330825 0.0 32 3.1388019004817744E-5 0.0 0.0 10.625126925301851 0.0 33 3.1388019004817744E-5 0.0 0.0 10.916533293742578 0.0 34 3.1388019004817744E-5 0.0 0.0 11.220369317709215 0.0 35 3.1388019004817744E-5 0.0 0.0 11.549817965183781 0.0 36 3.1388019004817744E-5 0.0 0.0 11.848820234223675 0.0 37 3.1388019004817744E-5 0.0 0.0 12.149674396384853 0.0 38 3.1388019004817744E-5 0.0 0.0 12.488068629275794 0.0 39 3.1388019004817744E-5 0.0 0.0 12.982775196810726 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 14925 0.0 42.99498 1 CGACGGT 460 0.0 40.597824 28 CGGTCTA 475 0.0 39.31579 31 CGTTAGG 545 0.0 38.394497 2 TACGGGA 1620 0.0 38.333332 4 TAGGGAC 4185 0.0 38.279568 5 ATAGCGG 530 0.0 38.207542 2 TAAGGGA 5655 0.0 37.99735 4 TATAGCG 215 0.0 37.67442 1 TATGGGA 4540 0.0 37.665195 4 TAGGGAT 6275 0.0 37.57769 5 CGGGATC 1240 0.0 37.560482 6 TTAGGGA 5710 0.0 37.552536 4 AGGGCGA 2325 0.0 37.35484 6 ACGGGAT 2015 0.0 37.295288 5 GGGCGAT 4135 0.0 37.16445 7 TTACGGG 1005 0.0 37.164177 3 AGGGATC 4645 0.0 37.152855 6 GTAGGGA 5680 0.0 37.117077 4 AAGGGAT 6270 0.0 37.105263 5 >>END_MODULE