##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547949_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1111984 Sequences flagged as poor quality 0 Sequence length 51 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.271440056691464 31.0 31.0 33.0 30.0 34.0 2 31.61530561590814 31.0 31.0 34.0 30.0 34.0 3 31.55767618958546 31.0 31.0 34.0 30.0 34.0 4 35.440242845220794 37.0 35.0 37.0 33.0 37.0 5 35.37777432049382 37.0 35.0 37.0 33.0 37.0 6 35.47951679160851 37.0 35.0 37.0 33.0 37.0 7 35.88503971280162 37.0 35.0 37.0 35.0 37.0 8 35.90952657592196 37.0 35.0 37.0 35.0 37.0 9 37.69515208851926 39.0 37.0 39.0 35.0 39.0 10 37.094977985294754 39.0 37.0 39.0 33.0 39.0 11 36.79668232636441 39.0 37.0 39.0 32.0 39.0 12 36.2310671736284 38.0 35.0 39.0 32.0 39.0 13 35.993939661002315 38.0 35.0 39.0 31.0 39.0 14 36.95552004345386 39.0 35.0 41.0 31.0 41.0 15 37.205907638958834 39.0 35.0 41.0 32.0 41.0 16 37.320791486208435 39.0 35.0 41.0 32.0 41.0 17 37.2711666714629 39.0 35.0 41.0 32.0 41.0 18 37.1591398797105 39.0 35.0 41.0 32.0 41.0 19 37.04831274550713 38.0 35.0 41.0 32.0 41.0 20 36.81251079152218 38.0 35.0 41.0 32.0 41.0 21 36.690590871811104 38.0 35.0 41.0 31.0 41.0 22 36.61778047166146 38.0 35.0 40.0 31.0 41.0 23 36.51871789522151 38.0 35.0 40.0 31.0 41.0 24 36.454340170362165 38.0 35.0 40.0 31.0 41.0 25 36.42097188448755 38.0 35.0 40.0 31.0 41.0 26 36.282232478165156 38.0 35.0 40.0 31.0 41.0 27 36.19699384163801 38.0 35.0 40.0 31.0 41.0 28 36.12505575619793 38.0 35.0 40.0 30.0 41.0 29 36.10631537863854 37.0 35.0 40.0 30.0 41.0 30 35.98835414898056 37.0 35.0 40.0 30.0 41.0 31 35.79397545288421 37.0 35.0 40.0 30.0 41.0 32 35.55781108361271 37.0 34.0 40.0 29.0 41.0 33 35.33689963164937 37.0 34.0 40.0 28.0 41.0 34 35.12117620397416 37.0 34.0 40.0 27.0 41.0 35 34.96769108188607 37.0 34.0 40.0 25.0 41.0 36 34.80947028014791 37.0 34.0 40.0 24.0 41.0 37 34.660598533791855 37.0 34.0 40.0 24.0 41.0 38 34.525305220218996 37.0 34.0 40.0 24.0 41.0 39 34.46163883653002 37.0 34.0 40.0 23.0 41.0 40 34.28061644771867 36.0 33.0 40.0 23.0 41.0 41 34.18686689736543 36.0 33.0 40.0 23.0 41.0 42 34.18686150160434 36.0 33.0 40.0 23.0 41.0 43 34.12647034489705 36.0 33.0 40.0 23.0 41.0 44 33.97288450193528 36.0 33.0 40.0 22.0 41.0 45 33.86858623865091 35.0 33.0 40.0 23.0 41.0 46 33.819385890444465 35.0 33.0 40.0 22.0 41.0 47 33.742430646484124 35.0 33.0 40.0 22.0 41.0 48 33.6158901566929 35.0 33.0 40.0 21.0 41.0 49 33.49848199254666 35.0 33.0 40.0 20.0 41.0 50 33.39635552310105 35.0 33.0 40.0 20.0 41.0 51 33.10772097440251 35.0 32.0 39.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 2.0 12 0.0 13 4.0 14 13.0 15 33.0 16 90.0 17 281.0 18 548.0 19 1111.0 20 1825.0 21 3055.0 22 4906.0 23 7363.0 24 11294.0 25 16406.0 26 21446.0 27 23371.0 28 23842.0 29 25907.0 30 29769.0 31 35690.0 32 43700.0 33 56222.0 34 92952.0 35 137874.0 36 90953.0 37 106200.0 38 142854.0 39 234228.0 40 43.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.938125008992934 24.84846904272004 29.906095771162178 14.307310177124851 2 32.63176448581994 26.073666527575934 28.86165628282421 12.43291270377991 3 27.44832659462726 25.022482337875363 34.427653635304104 13.10153743219327 4 23.958977827019094 27.394458913077884 34.630084605533895 14.016478654369127 5 22.00202520899581 31.587864573590984 33.13096231600455 13.279147901408653 6 19.68715377199672 40.765784399775534 29.681811968517536 9.865249859710213 7 85.99728053641059 3.2725291011381463 9.332958028173067 1.3972323342781912 8 86.77462985078922 2.4771939164592296 8.933311990100577 1.8148642426509733 9 82.6168362134707 4.8873904660498715 10.315346263975021 2.1804270565044104 10 40.80886055914474 33.05119498122275 15.36577864429704 10.774165815335472 11 31.957564137613492 21.711373544943093 29.357976373760774 16.97308594368264 12 32.445340940157415 22.167135498352494 29.22766874343516 16.159854818054935 13 22.291597720830516 33.25911164189413 29.109951222319747 15.33933941495561 14 16.246816500956847 37.358720988791205 29.956546137354493 16.43791637289745 15 14.747154635318493 28.07378523431992 41.407879969495966 15.771180160865624 16 18.508449761867077 25.437596224406107 39.78510482165211 16.268849192074704 17 18.744694168261415 25.35369213945524 29.155995050288492 26.745618641994852 18 19.498751780601157 28.85086476064404 33.88430049353228 17.76608296522252 19 23.394581216995928 30.02165498784155 27.904897912200177 18.678865882962345 20 24.109609490784038 30.16194477618383 27.499226607577086 18.229219125455042 21 20.18841997726586 30.57804788558109 31.90927207585721 17.324260061295846 22 20.311353400768358 27.111271385199785 29.58082130678139 22.996553907250465 23 16.629016244838056 32.372228377386726 29.492420754255456 21.506334623519763 24 17.181991827220536 31.181024187398382 35.29025597490612 16.34672801047497 25 17.70610008777105 30.6157282838602 32.60739363156304 19.07077799680571 26 16.26489230060864 35.7513237600541 27.581422034849425 20.402361904487833 27 16.64853091411387 35.62973927682413 30.204751147498527 17.516978661563478 28 14.033295443099899 33.11189729348624 34.67747737377516 18.1773298896387 29 15.457686441531532 30.501697866156345 33.40209931078145 20.63851638153067 30 17.847019381573837 33.98259327472338 31.1082713420337 17.06211600166909 31 23.227672340609217 31.952438164577906 27.091936574626974 17.727952920185903 32 23.591796284838633 32.267910329645034 26.644178333501202 17.49611505201514 33 22.319026173038463 33.04103296450309 25.887692628670916 18.752248233787537 34 17.108789335098347 33.129703305083524 28.397530899725176 21.36397646009295 35 17.17803493575447 32.41314623231989 28.391955279932084 22.016863551993556 36 24.88174290277558 31.865926128433504 26.040032950114387 17.212298018676528 37 17.765633318465014 36.343778327745724 28.28574871580886 17.6048396379804 38 19.07077799680571 35.805191441603476 24.98588109181427 20.138149469776543 39 17.80223456452611 34.821184477474496 26.778982431401893 20.597598526597505 40 20.442020748499978 32.310087195499214 26.51962618167168 20.72826587432913 41 17.122818313932576 30.811864199484884 27.460556986431463 24.604760500151084 42 19.201085627131327 32.09641505633174 25.807026000374105 22.895473316162825 43 19.00737780399718 32.005046835206265 27.28267672916157 21.704898631634986 44 18.332098303572714 34.32666297356797 26.64471790961021 20.696520813249112 45 17.281543619332652 37.74676614052 23.34287183988259 21.628818400264752 46 20.59166318939841 34.938722139886906 25.521230521302464 18.948384149412224 47 19.470873681635705 33.803184218477966 26.396512899466178 20.329429200420147 48 19.11385415617491 33.065673606814485 27.7957236794774 20.0247485575332 49 20.295705693607104 30.620404610138273 27.852109382868818 21.231780313385805 50 18.04989999856113 34.39869638412063 26.816123253571995 20.73528036374624 51 17.132530683894732 35.4129196103541 25.318619692369676 22.13593001338149 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1405.0 1 1703.5 2 2002.0 3 12347.5 4 22693.0 5 15447.5 6 8202.0 7 8026.0 8 7850.0 9 9560.5 10 11271.0 11 12964.5 12 14658.0 13 15496.5 14 16335.0 15 15869.5 16 15404.0 17 14367.5 18 13331.0 19 12240.0 20 11149.0 21 10505.0 22 9861.0 23 9624.0 24 9387.0 25 9718.0 26 10637.5 27 11226.0 28 12962.0 29 14698.0 30 17499.5 31 20301.0 32 23333.5 33 26366.0 34 28015.5 35 29665.0 36 33311.5 37 36958.0 38 41756.5 39 46555.0 40 57152.0 41 67749.0 42 78406.5 43 89064.0 44 93073.5 45 97083.0 46 100097.5 47 103112.0 48 102815.0 49 102518.0 50 94460.5 51 86403.0 52 75856.0 53 65309.0 54 56584.5 55 47860.0 56 42382.5 57 36905.0 58 32383.5 59 27862.0 60 23294.0 61 18726.0 62 15440.5 63 12155.0 64 10132.5 65 8110.0 66 6207.5 67 4305.0 68 3290.5 69 2276.0 70 1875.5 71 1475.0 72 1127.5 73 780.0 74 623.5 75 315.5 76 164.0 77 119.0 78 74.0 79 69.0 80 64.0 81 57.5 82 51.0 83 52.5 84 54.0 85 41.5 86 29.0 87 18.5 88 8.0 89 9.0 90 10.0 91 6.0 92 2.0 93 2.5 94 3.0 95 1.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1111984.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.957547829040962 #Duplication Level Percentage of deduplicated Percentage of total 1 75.24307268338919 24.04584094083415 2 9.140133151078578 5.84192484678793 3 3.860304898249358 3.700976352614548 4 2.202508455806727 2.815470772812425 5 1.41260776358222 2.257174008417669 6 0.9535572594067108 1.8284011035131504 7 0.7368413193132586 1.648334919305697 8 0.5671585498203742 1.4499997186027296 9 0.4785560745363692 1.3764130776786696 >10 4.584716504640197 32.745247256310115 >50 0.7435201174208179 15.663494831700575 >100 0.0716230706078062 3.6538800340143083 >500 0.003979059477719624 0.8347210278881708 >1k 0.0011368741364913212 0.48003271299118416 >5k 0.0 0.0 >10k+ 2.842185341228303E-4 1.658088396528679 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 18255 1.6416603116591606 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 1616 0.14532583202636007 No Hit CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1558 0.1401099296392754 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.09199772658599405 0.0 2 0.0 0.0 0.0 0.3015331155843969 0.0 3 0.0 0.0 0.0 0.4776147858242565 0.0 4 0.0 0.0 0.0 0.6985712024633448 0.0 5 0.0 0.0 0.0 1.2081109080706198 0.0 6 0.0 0.0 0.0 1.7548813651994992 0.0 7 0.0 0.0 0.0 2.1171167930473818 0.0 8 0.0 0.0 0.0 2.8780989654527405 0.0 9 0.0 0.0 0.0 3.1639843738758833 0.0 10 0.0 0.0 0.0 3.656527432049382 0.0 11 0.0 0.0 0.0 4.3862141901322325 0.0 12 0.0 0.0 0.0 4.903757608023137 0.0 13 0.0 0.0 0.0 5.102951121598872 0.0 14 0.0 0.0 0.0 5.196117929754385 0.0 15 0.0 0.0 0.0 5.319501000014388 0.0 16 0.0 0.0 0.0 5.6200448927322695 0.0 17 0.0 0.0 0.0 6.0387559533230695 0.0 18 0.0 0.0 0.0 6.5187988316378656 0.0 19 0.0 0.0 0.0 6.7789644455315905 0.0 20 0.0 0.0 0.0 7.04497546727291 0.0 21 0.0 0.0 0.0 7.40082591116419 0.0 22 0.0 0.0 0.0 7.79930286766716 0.0 23 0.0 0.0 0.0 8.23150333098318 0.0 24 0.0 0.0 0.0 8.54247902847523 0.0 25 0.0 0.0 0.0 8.811907365573605 0.0 26 0.0 0.0 0.0 9.082774572296005 0.0 27 0.0 0.0 0.0 9.364073583792573 0.0 28 0.0 0.0 0.0 9.649958992215716 0.0 29 0.0 0.0 0.0 9.985395473316164 0.0 30 0.0 0.0 0.0 10.354825249284163 0.0 31 0.0 0.0 0.0 10.691610670657132 0.0 32 0.0 0.0 0.0 10.985589720715407 0.0 33 0.0 0.0 0.0 11.280108346882688 0.0 34 0.0 0.0 0.0 11.610508784299055 0.0 35 0.0 0.0 0.0 11.999003582785363 0.0 36 0.0 0.0 0.0 12.340105613030403 0.0 37 0.0 0.0 0.0 12.682106936790458 0.0 38 0.0 0.0 0.0 13.053065511733982 0.0 39 0.0 0.0 0.0 13.563684369559274 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AAGTACG 20 7.0331874E-4 45.0 1 ACGTTAC 20 7.0331874E-4 45.0 44 GCGCGTC 55 1.8189894E-12 45.0 38 CGTGATA 20 7.0331874E-4 45.0 17 GCTGCGA 25 3.890723E-5 45.0 9 GCGATAC 40 6.8139343E-9 45.0 9 ACGTCGA 20 7.0331874E-4 45.0 35 TCGCGCG 20 7.0331874E-4 45.0 1 AGTAACG 20 7.0331874E-4 45.0 1 AGTCGGC 105 0.0 45.0 30 CGTTTTT 6760 0.0 44.234467 1 CTACGGG 130 0.0 43.26923 3 ATTAGCG 80 0.0 42.1875 1 GCGCGAC 155 0.0 42.096775 9 ACGGGTA 65 0.0 41.53846 5 CGCATCG 120 0.0 41.250004 21 CGACGGT 420 0.0 41.25 28 TACGGGT 55 6.184564E-11 40.909092 4 CGTTCGG 55 6.184564E-11 40.909092 45 TAGGGCG 350 0.0 40.5 5 >>END_MODULE