##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547947_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2766318 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.44656724208858 31.0 31.0 33.0 30.0 34.0 2 31.836605552940767 31.0 31.0 34.0 30.0 34.0 3 31.819264451881526 31.0 31.0 34.0 30.0 34.0 4 35.671753211308314 37.0 35.0 37.0 33.0 37.0 5 35.6530691699219 37.0 35.0 37.0 33.0 37.0 6 35.71786938450315 37.0 35.0 37.0 33.0 37.0 7 36.0103776933816 37.0 35.0 37.0 35.0 37.0 8 36.02756660658681 37.0 35.0 37.0 35.0 37.0 9 37.81604609448372 39.0 38.0 39.0 35.0 39.0 10 37.323454498000594 39.0 37.0 39.0 34.0 39.0 11 37.072256334954986 39.0 37.0 39.0 33.0 39.0 12 36.768238141818834 39.0 35.0 39.0 33.0 39.0 13 36.689621728232254 39.0 35.0 39.0 33.0 39.0 14 37.82910786106297 40.0 36.0 41.0 33.0 41.0 15 37.9584082524135 40.0 36.0 41.0 33.0 41.0 16 37.99964826892642 40.0 36.0 41.0 33.0 41.0 17 37.9085585966617 40.0 36.0 41.0 33.0 41.0 18 37.7783190508105 39.0 36.0 41.0 33.0 41.0 19 37.687399279475464 39.0 36.0 41.0 33.0 41.0 20 37.51523975190126 39.0 35.0 41.0 33.0 41.0 21 37.40390331118837 39.0 35.0 41.0 33.0 41.0 22 37.338723892191716 39.0 35.0 41.0 32.0 41.0 23 37.199500563564996 39.0 35.0 41.0 32.0 41.0 24 37.168020813225375 39.0 35.0 41.0 32.0 41.0 25 37.19541498844312 39.0 35.0 41.0 32.0 41.0 26 37.12410178439355 39.0 35.0 41.0 32.0 41.0 27 37.05437552732549 39.0 35.0 41.0 32.0 41.0 28 37.00558287225113 39.0 35.0 41.0 32.0 41.0 29 37.00379095967998 39.0 35.0 41.0 32.0 41.0 30 36.91778747056557 39.0 35.0 41.0 31.0 41.0 31 36.77501104356043 39.0 35.0 41.0 31.0 41.0 32 36.57373772646529 39.0 35.0 41.0 30.0 41.0 33 36.38096198629369 39.0 35.0 41.0 30.0 41.0 34 36.183914864451594 39.0 35.0 41.0 30.0 41.0 35 36.03568244865558 39.0 35.0 41.0 29.0 41.0 36 35.93804797568465 39.0 35.0 41.0 29.0 41.0 37 35.85661265263068 39.0 35.0 41.0 28.0 41.0 38 35.73512083571014 39.0 35.0 41.0 27.0 41.0 39 35.667774637623005 38.0 35.0 41.0 27.0 41.0 40 35.526812535652084 38.0 35.0 40.0 26.0 41.0 41 35.414778778144814 38.0 35.0 40.0 26.0 41.0 42 35.39630476322679 38.0 35.0 40.0 26.0 41.0 43 35.336232132386804 38.0 35.0 40.0 26.0 41.0 44 35.21711603655111 38.0 34.0 40.0 25.0 41.0 45 35.1130115915813 38.0 34.0 40.0 25.0 41.0 46 35.02759805633337 38.0 34.0 40.0 24.0 41.0 47 34.974519559934905 38.0 34.0 40.0 24.0 41.0 48 34.843456175320405 38.0 34.0 40.0 24.0 41.0 49 34.710702818692575 38.0 34.0 40.0 24.0 41.0 50 34.63595906182876 37.0 34.0 40.0 24.0 41.0 51 34.36329771197671 37.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 3.0 11 5.0 12 3.0 13 2.0 14 15.0 15 45.0 16 150.0 17 304.0 18 731.0 19 1531.0 20 2812.0 21 4638.0 22 7580.0 23 12021.0 24 19181.0 25 30261.0 26 41608.0 27 47062.0 28 48739.0 29 51730.0 30 58938.0 31 70653.0 32 88149.0 33 115221.0 34 184504.0 35 258359.0 36 209300.0 37 276445.0 38 442712.0 39 793492.0 40 123.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.45682528183672 24.49176125087571 27.93594228863059 15.115471178656973 2 32.621990674969396 25.18398101736677 29.105077579656424 13.08895072800741 3 27.461665650876 25.261520909743567 33.96272590497549 13.314087534404939 4 24.253176966639412 27.274738479090253 33.390448965014144 15.081635589256187 5 22.984703855449734 31.150359430839114 31.894091713244826 13.970845000466323 6 21.87340717878422 39.33864436409697 28.378371539353033 10.409576917765781 7 87.87785786015925 2.4975436663463855 8.231157806152439 1.3934406673419326 8 88.46983607813708 1.9492697513445671 7.970269506253438 1.6106246642649182 9 83.07689137691328 5.414236541135184 9.334899313817138 2.1739727681343934 10 34.55192063963723 42.441179936652254 14.161423234783566 8.845476188926941 11 27.149300984196323 24.82100756312181 31.560543654055678 16.46914779862619 12 27.184799433759967 23.31789042329913 31.321200238005897 18.176109904935007 13 23.062677537434237 27.663160923653752 31.816804864805853 17.45735667410616 14 17.547729509044153 31.022680689638722 32.1096851482729 19.319904653044226 15 17.066439939298377 27.80634764332951 37.448623043337754 17.678589374034367 16 21.092658183187908 26.800714885273493 35.267709641480124 16.838917290058482 17 20.35879461435742 25.572909549805917 31.114897130409446 22.953398705427215 18 21.329435010725447 25.52436126287723 33.87838997541136 19.26781375098597 19 22.41466816179485 27.17572600113219 30.810340676668407 19.599265160404553 20 24.524295471453392 26.884508577828004 30.566370171469803 18.024825779248808 21 22.831395378260925 26.66540867680433 32.78462562872381 17.718570316210936 22 22.331308258848043 23.220432358102 32.468031513369034 21.980227869680927 23 18.708911990595443 28.201240782874564 32.072704584216275 21.01714264231372 24 18.63495086248219 26.89228064163267 35.62479078688712 18.847977708998027 25 19.14136408034073 28.405736433772255 32.98246983897007 19.470429646916948 26 19.687613643839935 30.156041351717338 30.35771737016496 19.798627634277764 27 18.693873950861757 29.225128853588057 32.4205677004596 19.660429495090586 28 16.837652070369348 28.86642099715217 35.00765277166255 19.28827416081593 29 17.706098864989492 26.190047565030483 35.041994448938986 21.06185912104104 30 19.18846640191041 27.032466983188485 34.393695880227796 19.38537073467331 31 21.940030032700506 27.302392566581286 31.259312920640358 19.49826448007785 32 21.559198906271803 27.19586106875638 31.899767127278935 19.34517289769289 33 20.832745909906237 27.21086295935608 31.15068477304489 20.805706357692788 34 18.583185302629705 27.93626763083637 32.380731354818934 21.099815711714996 35 18.547361510860284 28.050571192465938 32.16177605033116 21.24029124634261 36 21.490262507781104 28.39901269485287 30.19291346837204 19.91781132899399 37 19.166306982783613 29.509622537972856 30.959636599985974 20.364433879257554 38 18.817287094253082 30.35677749268161 29.81226308761321 21.0136723254521 39 19.47823785985559 29.06791626992992 29.82444534576285 21.629400524451636 40 21.685793173452943 27.965259236284478 29.42539505581065 20.923552534451932 41 18.816058023697927 27.898925575439986 30.435293411675733 22.849722989186347 42 20.373362715349426 28.32483467193577 29.532107299305434 21.769695313409375 43 20.32864623662211 27.904745586009994 29.994057082374475 21.772551094993418 44 19.716569100154068 28.63658480333787 30.154270044152554 21.492576052355513 45 19.173030721703 29.53517997569332 28.743550090770476 22.548239211833202 46 20.683124644382893 28.776301206152006 29.736819845006973 20.803754304458128 47 19.81558157811213 28.567178466105485 30.566008680130054 21.05123127565233 48 19.791253210946824 28.056391203035947 31.361759566326068 20.790596019691158 49 20.4913173395105 26.66056469285165 31.180037869832756 21.6680800978051 50 18.9899715072526 28.860962477921916 31.059661253695346 21.089404761130137 51 18.811250188879225 28.56352740357399 29.849243651669838 22.775978755876945 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1552.0 1 2629.0 2 3706.0 3 24707.0 4 45708.0 5 32643.5 6 19579.0 7 18162.5 8 16746.0 9 17570.5 10 18395.0 11 18695.5 12 18996.0 13 18876.5 14 18757.0 15 18355.0 16 17953.0 17 17359.5 18 16766.0 19 16326.0 20 15886.0 21 16172.0 22 16458.0 23 17868.0 24 19278.0 25 22622.0 26 30728.0 27 35490.0 28 41189.5 29 46889.0 30 56488.0 31 66087.0 32 76070.5 33 86054.0 34 93923.0 35 101792.0 36 110818.0 37 119844.0 38 129219.5 39 138595.0 40 154564.5 41 170534.0 42 187158.5 43 203783.0 44 219725.5 45 235668.0 46 239276.0 47 242884.0 48 233706.0 49 224528.0 50 209081.0 51 193634.0 52 178344.5 53 163055.0 54 147235.0 55 131415.0 56 117413.0 57 103411.0 58 92206.0 59 81001.0 60 69927.5 61 58854.0 62 51125.0 63 43396.0 64 34907.0 65 26418.0 66 21289.5 67 16161.0 68 12569.5 69 8978.0 70 6696.0 71 4414.0 72 3674.5 73 2935.0 74 2500.0 75 1763.0 76 1461.0 77 1104.0 78 747.0 79 491.0 80 235.0 81 186.0 82 137.0 83 96.0 84 55.0 85 41.5 86 28.0 87 20.0 88 12.0 89 9.5 90 7.0 91 4.5 92 2.0 93 2.5 94 3.0 95 1.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2766318.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 22.89599546856702 #Duplication Level Percentage of deduplicated Percentage of total 1 75.23095348976292 17.22487570197588 2 8.662903673000494 3.966916064833038 3 3.219479666932612 2.2113957559569823 4 1.6977539150726073 1.5548706378497734 5 1.0616073820165777 1.2153278904024427 6 0.7541164043861776 1.0359747466558784 7 0.608474476609161 0.9752140201427426 8 0.48788148846805723 0.8936425879329897 9 0.3990376891566274 0.8222728610445836 >10 5.887658621610495 34.33701251188418 >50 1.798275856559926 27.886614851084346 >100 0.18688102950864938 5.748228185765654 >500 0.0033710466203575808 0.535984055211651 >1k 0.0014447342658675346 0.5041918171427984 >5k 0.0 0.0 >10k+ 1.605260295408372E-4 1.0874783121170084 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 29588 1.0695805760581394 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.0844740192559207E-4 0.0 0.0 0.059826816728951626 0.0 2 1.0844740192559207E-4 0.0 0.0 0.17564864198548397 0.0 3 1.0844740192559207E-4 0.0 0.0 0.2951576789074864 0.0 4 1.0844740192559207E-4 0.0 0.0 0.4658177404043931 0.0 5 1.0844740192559207E-4 0.0 0.0 0.8612892660930522 0.0 6 1.0844740192559207E-4 0.0 0.0 1.3665095625304104 0.0 7 1.0844740192559207E-4 0.0 0.0 1.6637638912084582 0.0 8 1.0844740192559207E-4 0.0 0.0 2.271611579001402 0.0 9 1.0844740192559207E-4 0.0 0.0 2.5477909625719097 0.0 10 1.0844740192559207E-4 0.0 0.0 2.9711334705554457 0.0 11 1.0844740192559207E-4 0.0 0.0 3.456471743306446 0.0 12 1.0844740192559207E-4 0.0 0.0 3.8438458629846606 0.0 13 1.0844740192559207E-4 0.0 0.0 4.020145189381698 0.0 14 1.0844740192559207E-4 0.0 0.0 4.10654161958242 0.0 15 1.0844740192559207E-4 0.0 0.0 4.220013751130564 0.0 16 1.0844740192559207E-4 0.0 0.0 4.422557348793595 0.0 17 1.0844740192559207E-4 0.0 0.0 4.691073115961361 0.0 18 1.0844740192559207E-4 0.0 0.0 5.010559162034155 0.0 19 1.0844740192559207E-4 0.0 0.0 5.220947121769804 0.0 20 1.0844740192559207E-4 0.0 0.0 5.431913467649055 0.0 21 1.0844740192559207E-4 0.0 0.0 5.692476425342278 0.0 22 1.0844740192559207E-4 0.0 0.0 5.990236841895979 0.0 23 1.0844740192559207E-4 0.0 0.0 6.304698158346221 0.0 24 1.0844740192559207E-4 0.0 0.0 6.544294618333828 0.0 25 1.0844740192559207E-4 0.0 0.0 6.758767430208675 0.0 26 1.0844740192559207E-4 0.0 0.0 6.961383326139655 0.0 27 1.0844740192559207E-4 0.0 0.0 7.175241602736923 0.0 28 1.0844740192559207E-4 0.0 0.0 7.406885253249988 0.0 29 1.0844740192559207E-4 0.0 0.0 7.664050192349542 0.0 30 1.0844740192559207E-4 0.0 0.0 7.991995135772532 0.0 31 1.0844740192559207E-4 0.0 0.0 8.26448730767757 0.0 32 1.0844740192559207E-4 0.0 0.0 8.534268294534467 0.0 33 1.0844740192559207E-4 0.0 0.0 8.793529883404583 0.0 34 1.0844740192559207E-4 0.0 0.0 9.062985528055705 0.0 35 1.0844740192559207E-4 0.0 0.0 9.372024474409667 0.0 36 1.0844740192559207E-4 0.0 0.0 9.648782244123778 0.0 37 1.0844740192559207E-4 0.0 0.0 9.93327592850858 0.0 38 1.0844740192559207E-4 0.0 0.0 10.23233771388539 0.0 39 1.0844740192559207E-4 0.0 0.0 10.593359114895684 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCGTCA 25 3.8922335E-5 45.000004 39 ACGCGAG 85 0.0 45.0 1 CGTTTTT 15490 0.0 42.90833 1 TACGGGA 1455 0.0 41.75258 4 CGGTCTA 460 0.0 41.576084 31 GCGTAAG 195 0.0 41.53846 1 CGACGGT 470 0.0 41.17021 28 GACGGTC 470 0.0 41.17021 29 ACGGTCT 470 0.0 40.69149 30 AATGCGG 385 0.0 39.74026 2 TATTCGA 40 3.4605728E-7 39.375 15 TATCCGA 40 3.4605728E-7 39.375 32 TCGAGCG 35 6.2514773E-6 38.571426 1 ACGGGAC 1075 0.0 38.302326 5 GCGAACG 100 0.0 38.250004 1 GTTTGCG 165 0.0 38.18182 1 TATGGGA 3625 0.0 38.17241 4 GGCGATA 980 0.0 38.112244 8 CGAGGGA 2515 0.0 38.02187 4 GTTACGG 320 0.0 37.96875 2 >>END_MODULE