##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547945_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3671365 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.37826394270251 31.0 31.0 33.0 30.0 34.0 2 31.77594545897779 31.0 31.0 34.0 30.0 34.0 3 31.807945546138836 31.0 31.0 34.0 30.0 34.0 4 35.626376565664266 37.0 35.0 37.0 33.0 37.0 5 35.56809361095941 37.0 35.0 37.0 33.0 37.0 6 35.63300352866032 37.0 35.0 37.0 33.0 37.0 7 35.94988349020051 37.0 35.0 37.0 35.0 37.0 8 35.964471524896055 37.0 35.0 37.0 35.0 37.0 9 37.75124156819058 39.0 38.0 39.0 35.0 39.0 10 37.21270971423435 39.0 37.0 39.0 33.0 39.0 11 36.9347812053555 39.0 37.0 39.0 33.0 39.0 12 36.45778341298128 39.0 35.0 39.0 32.0 39.0 13 36.295222076802496 39.0 35.0 39.0 32.0 39.0 14 37.303538874505804 40.0 35.0 41.0 32.0 41.0 15 37.514896503071746 40.0 35.0 41.0 32.0 41.0 16 37.61760516864981 40.0 35.0 41.0 33.0 41.0 17 37.55543619335043 39.0 35.0 41.0 33.0 41.0 18 37.46423006157111 39.0 36.0 41.0 32.0 41.0 19 37.37090455457302 39.0 36.0 41.0 32.0 41.0 20 37.21118739215523 39.0 35.0 41.0 32.0 41.0 21 37.10735925194035 39.0 35.0 41.0 32.0 41.0 22 37.04416804104196 39.0 35.0 41.0 32.0 41.0 23 36.92953928579697 39.0 35.0 41.0 32.0 41.0 24 36.877573600009804 38.0 35.0 41.0 32.0 41.0 25 36.88291956806256 38.0 35.0 41.0 32.0 41.0 26 36.79375109802485 38.0 35.0 41.0 31.0 41.0 27 36.71109410260217 38.0 35.0 41.0 31.0 41.0 28 36.678275518778435 38.0 35.0 41.0 31.0 41.0 29 36.66945536605595 38.0 35.0 41.0 31.0 41.0 30 36.5990322400524 38.0 35.0 41.0 31.0 41.0 31 36.43787664805869 38.0 35.0 40.0 31.0 41.0 32 36.26064801511155 38.0 35.0 40.0 30.0 41.0 33 36.118732950823464 38.0 35.0 41.0 30.0 41.0 34 35.94961764902155 38.0 35.0 40.0 30.0 41.0 35 35.84232540213245 38.0 35.0 41.0 29.0 41.0 36 35.75035742836792 38.0 35.0 40.0 29.0 41.0 37 35.6324013003338 38.0 35.0 40.0 28.0 41.0 38 35.516760115107054 38.0 35.0 40.0 27.0 41.0 39 35.46604627978967 38.0 35.0 40.0 27.0 41.0 40 35.32049714479492 38.0 34.0 40.0 26.0 41.0 41 35.238828065310855 38.0 34.0 40.0 26.0 41.0 42 35.23483064200917 38.0 34.0 40.0 26.0 41.0 43 35.17500357496463 38.0 34.0 40.0 26.0 41.0 44 35.06038816625424 38.0 34.0 40.0 26.0 41.0 45 34.95329175933202 38.0 34.0 40.0 25.0 41.0 46 34.90371891653377 37.0 34.0 40.0 25.0 41.0 47 34.827164555962156 37.0 34.0 40.0 25.0 41.0 48 34.705603501694874 37.0 34.0 40.0 24.0 41.0 49 34.57727384773783 37.0 34.0 40.0 24.0 41.0 50 34.48236337166149 37.0 34.0 40.0 24.0 41.0 51 34.18846287416261 36.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 2.0 11 4.0 12 6.0 13 26.0 14 25.0 15 90.0 16 211.0 17 558.0 18 1252.0 19 2441.0 20 4380.0 21 7349.0 22 11530.0 23 17509.0 24 26714.0 25 40248.0 26 53797.0 27 61097.0 28 66138.0 29 73221.0 30 86659.0 31 104331.0 32 130597.0 33 170163.0 34 278490.0 35 391419.0 36 281327.0 37 349421.0 38 544554.0 39 967651.0 40 153.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.549863606587742 25.406572214966367 30.164747988827045 13.878816189618847 2 32.39446363954551 25.9162464097141 28.40916117030042 13.280128780439973 3 28.498092671254426 25.66244434971734 32.718021771194095 13.121441207834145 4 25.022137542848505 27.491219205935668 32.58736192124728 14.899281329968552 5 22.50626129518585 32.33715525424468 30.759812767186045 14.396770683383428 6 21.3348441247329 40.72842117305144 27.588376530255093 10.348358171960564 7 88.7435327187572 2.7836785500760617 7.06758930261633 1.4051994285504166 8 89.33769864886766 2.1901935656084315 6.838192334458709 1.6339154510652032 9 84.50355657909252 5.074243503438095 8.101046885831293 2.3211530316380964 10 39.699539544556316 37.82140974814545 13.484929991978461 8.994120715319779 11 31.82380395302565 24.338794971352616 27.60676206261159 16.230639013010148 12 30.69741090847682 23.390973112180347 28.705753854492812 17.20586212485002 13 23.493087720779602 30.635199714547586 29.41186724828504 16.459845316387774 14 16.933946910753903 34.36294130384748 30.678017576568934 18.025094208829685 15 16.014670292929196 28.725283375529266 38.74076807944729 16.51927825209425 16 20.39459438110893 26.65934877082502 36.76267546266851 16.18338138539753 17 20.15337619659173 25.49422353811185 29.566033341822457 24.786366923473967 18 21.743465986084196 26.846908438686974 32.412740220599154 18.99688535462968 19 23.710145953889082 28.62444894473854 28.851912027270508 18.813493074101867 20 24.879002768724984 28.881982586858022 28.464099864764197 17.7749147796528 21 22.31995456730671 28.452551026661745 31.12648837693882 18.101006029092723 22 22.13658952460461 25.209561021581887 30.66979175320351 21.98405770060999 23 18.25174015659026 29.650661266313755 30.624331822087967 21.473266755008012 24 18.826512754792834 28.605028375004938 33.98588808249793 18.5825707877043 25 19.219609055487535 29.17470749979912 31.870544061949712 19.73513938276363 26 18.693837305743234 32.6217632951232 28.298439408775756 20.38595999035781 27 18.026565051418206 32.06978875704268 31.09257728392573 18.811068907613382 28 16.319733940918432 30.684772557345834 33.91697638344321 19.078517118292517 29 17.459228379635366 28.216671455984354 33.669575212489086 20.65452495189119 30 19.53159111120796 29.110616895895667 32.30030247605455 19.057489516841827 31 23.71469467078321 28.383339711524187 28.480878365403605 19.421087252289 32 23.462390691200685 29.016891537616118 29.511557690395808 18.00916008078739 33 22.72901223386942 28.64700186442917 27.976215930587124 20.647769971114286 34 18.832559552101195 29.83560610290723 30.271710930403266 21.060123414588308 35 18.21453328666586 30.04765257608546 30.421219355743705 21.31659478150497 36 23.863113583095117 28.306311140406905 28.194309201073715 19.636266075424263 37 19.348035403725863 31.774884818044512 29.325659529902364 19.551420248327254 38 19.465212529944584 32.00752308746202 27.408470691418586 21.118793691174808 39 19.005764885812226 30.39893881431021 28.480633224972184 22.114663074905383 40 21.381774898436955 28.869698327461315 28.397231002637984 21.351295771463747 41 17.903313890065412 27.71753829978768 29.78475308230045 24.594394727846456 42 20.565348310505765 28.023528033851168 28.54570439060132 22.865419265041748 43 20.343877549630722 28.416297480637308 28.757369534219563 22.482455435512406 44 20.14485075714346 30.187518811123383 28.34591493899408 21.321715492739077 45 18.56413077969638 32.204534280846495 26.825336080722018 22.405998858735103 46 21.088586942458733 30.634110201519054 27.66148285446966 20.615820001552557 47 19.61714512177351 29.982554172630614 29.2061399506723 21.194160754923576 48 20.458821174140954 29.30811837014298 29.410968400036495 20.822092055679565 49 21.01673355822698 26.966863823128456 29.912716387501654 22.103686231142913 50 18.935327868517568 30.14655312125054 29.454603396829242 21.463515613402645 51 18.092671254424445 30.91272592074065 27.44861924652003 23.54598357831488 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1758.0 1 3341.5 2 4925.0 3 27165.0 4 49405.0 5 34757.0 6 20109.0 7 19237.5 8 18366.0 9 20488.0 10 22610.0 11 25014.0 12 27418.0 13 27609.5 14 27801.0 15 25952.5 16 24104.0 17 22305.5 18 20507.0 19 19928.5 20 19350.0 21 18544.0 22 17738.0 23 20604.5 24 23471.0 25 27537.5 26 37957.5 27 44311.0 28 55031.0 29 65751.0 30 74721.5 31 83692.0 32 97180.5 33 110669.0 34 120604.0 35 130539.0 36 138800.5 37 147062.0 38 167833.5 39 188605.0 40 212152.0 41 235699.0 42 258921.5 43 282144.0 44 295633.0 45 309122.0 46 314345.5 47 319569.0 48 318280.5 49 316992.0 50 294788.0 51 272584.0 52 248337.5 53 224091.0 54 198006.5 55 171922.0 56 154522.5 57 137123.0 58 122134.5 59 107146.0 60 94098.5 61 81051.0 62 68374.5 63 55698.0 64 45045.0 65 34392.0 66 26817.0 67 19242.0 68 14889.5 69 10537.0 70 8312.0 71 6087.0 72 4558.0 73 3029.0 74 2845.0 75 2026.5 76 1392.0 77 955.0 78 518.0 79 435.0 80 352.0 81 227.0 82 102.0 83 73.0 84 44.0 85 36.5 86 29.0 87 24.5 88 20.0 89 13.0 90 6.0 91 7.5 92 9.0 93 7.0 94 5.0 95 4.5 96 4.0 97 2.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3671365.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.929673797619113 #Duplication Level Percentage of deduplicated Percentage of total 1 75.18247239034606 14.983621500381023 2 9.454617897658506 3.7685490116293097 3 3.683824047044456 2.202522347562633 4 1.9543210492508882 1.557959240295637 5 1.1930079440297585 1.1888129581240663 6 0.8388760978777259 1.0031116192393608 7 0.5851091367718184 0.8162723962308194 8 0.426048778909178 0.6792810548427091 9 0.36362599069012774 0.6522252640911297 >10 3.80537531106166 17.643048872784224 >50 1.437589090765771 20.68968787293555 >100 1.066503954278059 32.22686297030845 >500 0.005844985085056906 0.7752319397764212 >1k 0.0026441599194305053 0.8565521089089912 >5k 0.0 0.0 >10k+ 1.3916631154897396E-4 0.9562608428897517 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 34478 0.9391057549440059 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 4291 0.1168775101358759 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 8.171347713997382E-5 0.0 0.0 0.06463536041771929 0.0 2 8.171347713997382E-5 0.0 0.0 0.19741976077017676 0.0 3 8.171347713997382E-5 0.0 0.0 0.321542532545797 0.0 4 8.171347713997382E-5 0.0 0.0 0.486930610277104 0.0 5 8.171347713997382E-5 0.0 0.0 0.9166617865562263 0.0 6 8.171347713997382E-5 0.0 0.0 1.429822422995262 0.0 7 8.171347713997382E-5 0.0 0.0 1.7899881924025534 0.0 8 8.171347713997382E-5 0.0 0.0 2.476326924726907 0.0 9 8.171347713997382E-5 0.0 2.723782571332461E-5 2.812087602295059 0.0 10 8.171347713997382E-5 0.0 2.723782571332461E-5 3.3041661616319815 0.0 11 8.171347713997382E-5 0.0 2.723782571332461E-5 3.8788570463574175 0.0 12 8.171347713997382E-5 0.0 2.723782571332461E-5 4.298564702774036 0.0 13 8.171347713997382E-5 0.0 2.723782571332461E-5 4.472832311687887 0.0 14 8.171347713997382E-5 0.0 2.723782571332461E-5 4.558658700510573 0.0 15 8.171347713997382E-5 0.0 2.723782571332461E-5 4.66308852429546 0.0 16 8.171347713997382E-5 0.0 2.723782571332461E-5 4.875679753987958 0.0 17 8.171347713997382E-5 0.0 2.723782571332461E-5 5.1621944426664195 0.0 18 8.171347713997382E-5 0.0 2.723782571332461E-5 5.514951523479687 0.0 19 8.171347713997382E-5 0.0 2.723782571332461E-5 5.719235216329621 0.0 20 8.171347713997382E-5 0.0 2.723782571332461E-5 5.926569545659448 0.0 21 8.171347713997382E-5 0.0 2.723782571332461E-5 6.192655865052917 0.0 22 8.171347713997382E-5 0.0 2.723782571332461E-5 6.496003530022213 0.0 23 8.171347713997382E-5 0.0 2.723782571332461E-5 6.809592617459718 0.0 24 8.171347713997382E-5 0.0 2.723782571332461E-5 7.028094455332009 0.0 25 8.171347713997382E-5 0.0 2.723782571332461E-5 7.225704880882179 0.0 26 8.171347713997382E-5 0.0 2.723782571332461E-5 7.41767707650969 0.0 27 8.171347713997382E-5 0.0 2.723782571332461E-5 7.6396925938989995 0.0 28 8.171347713997382E-5 0.0 2.723782571332461E-5 7.858793663936982 0.0 29 8.171347713997382E-5 0.0 2.723782571332461E-5 8.114121042173688 0.0 30 8.171347713997382E-5 0.0 2.723782571332461E-5 8.420056300585749 0.0 31 8.171347713997382E-5 0.0 2.723782571332461E-5 8.684290447830712 0.0 32 8.171347713997382E-5 0.0 2.723782571332461E-5 8.924882162356507 0.0 33 8.171347713997382E-5 0.0 2.723782571332461E-5 9.174516835019128 0.0 34 8.171347713997382E-5 0.0 2.723782571332461E-5 9.436680907509878 0.0 35 8.171347713997382E-5 0.0 2.723782571332461E-5 9.735888422970747 0.0 36 8.171347713997382E-5 0.0 2.723782571332461E-5 9.998433825021484 0.0 37 8.171347713997382E-5 0.0 2.723782571332461E-5 10.273154535166077 0.0 38 8.171347713997382E-5 0.0 2.723782571332461E-5 10.585109353060783 0.0 39 8.171347713997382E-5 0.0 2.723782571332461E-5 11.047062877158767 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCGTCGA 30 2.1668093E-6 45.000004 23 TACGTCG 20 7.0353114E-4 45.0 2 CGTTTTT 14585 0.0 42.84025 1 CGTAAGG 620 0.0 41.73387 2 CGACGGT 465 0.0 41.612904 28 GCGTAAG 250 0.0 41.399998 1 ACGGGAT 2050 0.0 41.268295 5 CGTCGGT 60 3.6379788E-12 41.250004 12 TAGGGCG 785 0.0 40.12739 5 TATAGCG 320 0.0 40.078125 1 AATCGCG 90 0.0 40.000004 1 CGGTCTA 480 0.0 39.843754 31 TTCGCGG 235 0.0 39.255318 2 TACGGGA 1845 0.0 39.146343 4 GACCGAT 1520 0.0 38.782894 9 GGCGATA 1150 0.0 38.739132 8 GGGCGAT 4645 0.0 38.654465 7 CGGGATC 1505 0.0 38.571426 6 TCACGAC 550 0.0 38.454544 25 CTATGCG 170 0.0 38.38235 1 >>END_MODULE