##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547944_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2803573 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.32827003256202 31.0 31.0 33.0 30.0 34.0 2 31.717223699900092 31.0 31.0 34.0 30.0 34.0 3 31.843796826406873 31.0 31.0 34.0 30.0 34.0 4 35.615615858763086 37.0 35.0 37.0 33.0 37.0 5 35.51912612940701 37.0 35.0 37.0 33.0 37.0 6 35.555373803357355 37.0 35.0 37.0 33.0 37.0 7 35.9039807417178 37.0 35.0 37.0 35.0 37.0 8 35.89893289741341 37.0 35.0 37.0 35.0 37.0 9 37.61018564524626 39.0 37.0 39.0 35.0 39.0 10 37.08766063876347 39.0 37.0 39.0 33.0 39.0 11 36.91177864817502 39.0 37.0 39.0 33.0 39.0 12 36.382665976594865 38.0 35.0 39.0 32.0 39.0 13 36.19060784220707 38.0 35.0 39.0 32.0 39.0 14 37.23150601036606 39.0 35.0 41.0 32.0 41.0 15 37.4074265232259 39.0 35.0 41.0 32.0 41.0 16 37.486594427896115 39.0 35.0 41.0 32.0 41.0 17 37.41127625355217 39.0 35.0 41.0 32.0 41.0 18 37.325328429115274 39.0 36.0 41.0 32.0 41.0 19 37.287254514150334 39.0 35.0 41.0 32.0 41.0 20 37.16082620284901 39.0 35.0 41.0 32.0 41.0 21 37.03777929092626 39.0 35.0 41.0 32.0 41.0 22 36.949997378345415 39.0 35.0 41.0 31.0 41.0 23 36.82602664528443 39.0 35.0 41.0 31.0 41.0 24 36.77968684960228 38.0 35.0 41.0 31.0 41.0 25 36.82185018902665 39.0 35.0 41.0 31.0 41.0 26 36.72180927694767 38.0 35.0 41.0 31.0 41.0 27 36.64410842877999 38.0 35.0 41.0 31.0 41.0 28 36.60010707764699 38.0 35.0 41.0 31.0 41.0 29 36.59370988378045 38.0 35.0 41.0 31.0 41.0 30 36.51897382375989 38.0 35.0 40.0 30.0 41.0 31 36.39082520769033 38.0 35.0 40.0 30.0 41.0 32 36.25316694090006 38.0 35.0 40.0 30.0 41.0 33 36.141790493773485 38.0 35.0 40.0 30.0 41.0 34 35.99912112151173 38.0 35.0 40.0 29.0 41.0 35 35.95312731289679 38.0 35.0 40.0 29.0 41.0 36 35.87000695184324 38.0 35.0 40.0 29.0 41.0 37 35.767347952059744 38.0 35.0 40.0 29.0 41.0 38 35.666591167770555 38.0 35.0 40.0 28.0 41.0 39 35.58840486764568 38.0 35.0 40.0 27.0 41.0 40 35.41842784190032 38.0 34.0 40.0 27.0 41.0 41 35.318048789883484 38.0 34.0 40.0 26.0 41.0 42 35.29331178464053 38.0 34.0 40.0 26.0 41.0 43 35.19584544436688 38.0 34.0 40.0 26.0 41.0 44 35.0518238690414 38.0 34.0 40.0 26.0 41.0 45 34.916941702605925 37.0 34.0 40.0 26.0 41.0 46 34.82106511940299 37.0 34.0 40.0 25.0 41.0 47 34.73914857933073 37.0 34.0 40.0 25.0 41.0 48 34.61351461153321 37.0 34.0 40.0 24.0 41.0 49 34.456707208979395 37.0 33.0 40.0 24.0 41.0 50 34.32896450351034 36.0 33.0 40.0 24.0 41.0 51 34.00008489167216 36.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 3.0 10 2.0 11 2.0 12 2.0 13 16.0 14 34.0 15 77.0 16 187.0 17 464.0 18 1110.0 19 2122.0 20 3667.0 21 5952.0 22 9350.0 23 13947.0 24 20619.0 25 29372.0 26 37900.0 27 44646.0 28 50573.0 29 59118.0 30 70077.0 31 84188.0 32 104544.0 33 133399.0 34 213840.0 35 296300.0 36 208116.0 37 272750.0 38 426752.0 39 714343.0 40 101.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.298028622761024 22.563992448208054 29.44346375143433 12.694515177596589 2 31.21284874693828 25.519827734109295 28.960508608122566 14.30681491082986 3 29.169028236468247 26.13946560335686 30.621638887234255 14.069867272940636 4 25.86074983601283 28.504091029554075 30.051544939261436 15.583614195171661 5 24.196088348689333 32.43860602167305 28.631000512560224 14.734305117077387 6 22.633617886889336 41.11788778105653 25.701952472790975 10.546541859263161 7 88.65993501863515 3.4672897762961763 6.02563229136534 1.847142913703335 8 88.25074289130335 3.0612365007082034 6.135848790097493 2.552171817890956 9 82.23984180187212 6.679226829477955 7.825549753831986 3.2553816148179484 10 34.9500797732037 41.02814515619889 13.230509781625091 10.791265288972323 11 34.65902261150325 24.442880567047833 25.448668538325915 15.449428283123002 12 32.78691155892856 22.876843228266218 26.980428189314136 17.355817023491095 13 24.76279376352961 31.280548072049484 27.32270570447069 16.633952459950212 14 18.631153888270433 34.31321388813489 28.92294939350607 18.132682830088605 15 17.259118988519294 27.894369078315425 38.03232517933366 16.814186753831628 16 21.190067103656656 26.194502515183306 35.98607919251612 16.62935118864392 17 20.852212515957316 25.430477465719637 28.18963515485418 25.527674863468867 18 22.005526519195325 25.79269382320346 32.086020232039616 20.115759425561595 19 24.941458631539113 27.000224356562143 28.068111656090284 19.990205355808463 20 27.16415802263754 27.085508385192753 26.764132769148514 18.986200823021196 21 23.539390627602703 27.901681176127745 30.10740223279365 18.45152596347589 22 23.513174081787778 24.296103579254044 28.60193046515999 23.588791873798183 23 20.430322306570936 29.486087931364725 28.470919073624977 21.61267068843936 24 19.793813109200293 26.654344295654152 33.75182311999723 19.80001947514832 25 19.768167263702423 28.025451807390066 31.207427093926217 20.99895383498129 26 20.268314754065617 31.174290806766937 28.030053078696366 20.527341360471084 27 19.97964739994286 30.893006887996137 29.063127658883857 20.06421805317714 28 17.170446426756143 29.56687769499849 32.768542142473194 20.494133735772174 29 19.44522222178627 27.14903446423546 32.32193347560416 21.083809838374105 30 21.28936895882504 28.08184413246953 30.127376743890743 20.501410164814686 31 24.49902321073858 28.039077277459867 26.82391362736051 20.637985884441033 32 24.778452353478936 28.28494210780315 27.670725891567656 19.26587964715026 33 24.06579033255064 27.47247886892904 27.3677910295184 21.093939769001913 34 19.52661835450691 28.59247824115869 29.933195961011183 21.947707443323218 35 19.875565929619096 27.953935923908528 30.259743548678774 21.910754597793602 36 24.854640845806404 27.657243096577115 27.524020241313497 19.964095816302983 37 20.21395554886568 31.15410228305095 28.645945727113226 19.985996440970148 38 20.263535138910242 30.572380316118043 26.997905886524087 22.16617865844763 39 20.122964517064474 29.11698750130637 28.041788103965903 22.718259877663254 40 22.57850963752326 25.98480581743368 29.215433305999166 22.22125123904389 41 19.048335820041068 26.320841297872395 29.400126196107614 25.230696685978927 42 22.183121324110342 27.426929849873716 27.221905760970017 23.168043065045925 43 21.753205641515308 27.12659880802105 28.049635233325475 23.070560317138167 44 20.443270070014226 28.793471759073153 28.216386732216353 22.546871438696265 45 19.920116223119567 30.341567706637207 26.47396732669347 23.26434874354975 46 21.334275940023677 28.92230735564938 28.09186705678789 21.65154964753905 47 21.20098174722042 28.244886079299526 28.391805742172576 22.162326431307477 48 20.687850824644123 27.395434326125983 29.75124956617859 22.165465283051304 49 21.64833945825559 25.554676122219753 30.112324523028295 22.684659896496363 50 19.870750645693906 29.12833017010793 29.014939150862133 21.985980033336034 51 19.532182682598243 28.41138789680169 27.564539963824735 24.491889456775336 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2135.0 1 3415.0 2 4695.0 3 11202.0 4 17709.0 5 13557.0 6 9405.0 7 9254.0 8 9103.0 9 9758.0 10 10413.0 11 10883.0 12 11353.0 13 11434.5 14 11516.0 15 11425.0 16 11334.0 17 11425.0 18 11516.0 19 11418.0 20 11320.0 21 11695.0 22 12070.0 23 14682.0 24 17294.0 25 20026.5 26 27390.0 27 32021.0 28 37796.5 29 43572.0 30 50708.5 31 57845.0 32 66719.0 33 75593.0 34 85972.5 35 96352.0 36 100875.0 37 105398.0 38 115989.0 39 126580.0 40 148694.0 41 170808.0 42 189964.0 43 209120.0 44 223573.5 45 238027.0 46 243555.0 47 249083.0 48 251884.5 49 254686.0 50 240991.5 51 227297.0 52 206498.0 53 185699.0 54 163020.0 55 140341.0 56 130857.5 57 121374.0 58 108990.0 59 96606.0 60 84030.0 61 71454.0 62 61782.5 63 52111.0 64 44052.5 65 35994.0 66 28692.0 67 21390.0 68 16855.0 69 12320.0 70 9932.5 71 7545.0 72 5798.0 73 4051.0 74 3320.0 75 2115.0 76 1641.0 77 1155.5 78 670.0 79 568.0 80 466.0 81 313.5 82 161.0 83 118.5 84 76.0 85 52.5 86 29.0 87 27.5 88 26.0 89 18.5 90 11.0 91 7.0 92 3.0 93 3.0 94 3.0 95 2.5 96 2.0 97 3.0 98 4.0 99 3.5 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2803573.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.516172227113792 #Duplication Level Percentage of deduplicated Percentage of total 1 75.78242787769149 15.54765342127548 2 9.897561750469917 4.061201630022694 3 3.614056086469543 2.22439791325374 4 1.769038431171385 1.4517558852118129 5 1.03469837564474 1.0614025038921187 6 0.6738835330706369 0.8295306375295871 7 0.4705431610951364 0.6757621173322857 8 0.35761834394699527 0.5869567628793418 9 0.2671041097141178 0.4931958525718264 >10 3.190069746078002 16.488133446070677 >50 2.0350933161604834 30.65337973889295 >100 0.9001258200518564 24.110693573724497 >500 0.005657780680598142 0.809412477487686 >1k 0.0019448621089556116 0.6506059960661081 >5k 1.7680564626869195E-4 0.35591804378906405 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9812 0.3499819694368579 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 3844 0.1371107511735917 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.1208457921373904 0.0 2 0.0 0.0 0.0 0.357258398479369 0.0 3 0.0 0.0 0.0 0.5387054305345358 0.0 4 0.0 0.0 0.0 0.8431740496858829 0.0 5 0.0 0.0 0.0 1.4176552563460985 0.0 6 0.0 0.0 0.0 1.9481925385927172 0.0 7 0.0 0.0 0.0 2.2449210346939426 0.0 8 0.0 0.0 0.0 3.0046658317796613 0.0 9 0.0 0.0 0.0 3.2455013655788525 0.0 10 0.0 0.0 0.0 3.7428666918963764 0.0 11 0.0 0.0 0.0 4.406020460319742 0.0 12 0.0 0.0 0.0 4.941052007563206 0.0 13 0.0 0.0 0.0 5.169831497164511 0.0 14 0.0 0.0 0.0 5.261036541584613 0.0 15 0.0 0.0 0.0 5.428465747102002 0.0 16 0.0 0.0 0.0 5.777270647134924 0.0 17 0.0 0.0 0.0 6.198447481124979 0.0 18 0.0 0.0 0.0 6.6864675897506505 0.0 19 0.0 0.0 0.0 6.947420309726196 0.0 20 0.0 0.0 0.0 7.240296578687268 0.0 21 0.0 0.0 0.0 7.603511661725948 0.0 22 3.566876981623093E-5 0.0 0.0 7.9980082558934615 0.0 23 3.566876981623093E-5 0.0 0.0 8.396927777518188 0.0 24 3.566876981623093E-5 0.0 0.0 8.696866462902875 0.0 25 3.566876981623093E-5 0.0 0.0 8.970196246004653 0.0 26 3.566876981623093E-5 0.0 0.0 9.237676350856567 0.0 27 3.566876981623093E-5 0.0 0.0 9.502766648130796 0.0 28 3.566876981623093E-5 0.0 0.0 9.786618718328361 0.0 29 3.566876981623093E-5 0.0 0.0 10.089446574068162 0.0 30 3.566876981623093E-5 0.0 0.0 10.453268026193717 0.0 31 3.566876981623093E-5 0.0 0.0 10.790658919885447 0.0 32 3.566876981623093E-5 0.0 0.0 11.098302059550438 0.0 33 3.566876981623093E-5 0.0 0.0 11.416681498930116 0.0 34 3.566876981623093E-5 0.0 0.0 11.741838004574877 0.0 35 3.566876981623093E-5 0.0 0.0 12.107835251659221 0.0 36 3.566876981623093E-5 0.0 0.0 12.438805766784029 0.0 37 3.566876981623093E-5 0.0 0.0 12.77512659738127 0.0 38 3.566876981623093E-5 0.0 0.0 13.107702207147808 0.0 39 3.566876981623093E-5 0.0 0.0 13.517750384955198 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTACGA 35 1.2127566E-7 45.000004 8 GTCGGTA 20 7.035026E-4 45.0 20 GTACGTA 25 3.8922473E-5 45.0 38 CGGTCTA 730 0.0 42.84247 31 TTTCGCG 100 0.0 42.75 1 CGACGGT 730 0.0 42.53425 28 CTCACGA 800 0.0 41.0625 24 ACGGGTA 105 0.0 40.714287 5 TACGACG 50 1.0822987E-9 40.5 1 GCGATAA 150 0.0 40.5 9 TCACGAC 795 0.0 40.4717 25 CACGACG 770 0.0 40.324673 26 GACGGTC 770 0.0 40.324673 29 TACGGGA 1430 0.0 40.27972 4 CGTTTTT 6275 0.0 39.729084 1 CACGACC 410 0.0 39.512196 27 CGTACTC 40 3.460591E-7 39.375 45 TTAGGGA 4420 0.0 38.99321 4 ACGGGAT 1340 0.0 38.955223 5 CACAACG 1265 0.0 38.774704 12 >>END_MODULE