##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547941_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2353829 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.339089628006114 31.0 31.0 33.0 30.0 34.0 2 31.721360387691714 31.0 31.0 34.0 30.0 34.0 3 31.68045682162978 31.0 31.0 34.0 30.0 34.0 4 35.55966172563937 37.0 35.0 37.0 33.0 37.0 5 35.53693152731146 37.0 35.0 37.0 33.0 37.0 6 35.601926478091656 37.0 35.0 37.0 33.0 37.0 7 35.90841008416499 37.0 35.0 37.0 35.0 37.0 8 35.92457523464959 37.0 35.0 37.0 35.0 37.0 9 37.71225649781696 39.0 37.0 39.0 35.0 39.0 10 37.10845010406448 39.0 37.0 39.0 33.0 39.0 11 36.9804875375399 39.0 37.0 39.0 33.0 39.0 12 36.57995759250141 39.0 35.0 39.0 32.0 39.0 13 36.42027054641607 39.0 35.0 39.0 32.0 39.0 14 37.42671493978535 40.0 36.0 41.0 32.0 41.0 15 37.58941707320285 40.0 36.0 41.0 32.0 41.0 16 37.670759005858116 40.0 36.0 41.0 33.0 41.0 17 37.607607434524766 40.0 36.0 41.0 32.0 41.0 18 37.480030197605686 39.0 36.0 41.0 32.0 41.0 19 37.36585410410017 39.0 36.0 41.0 32.0 41.0 20 37.149186708125356 39.0 35.0 41.0 32.0 41.0 21 37.05223574014935 39.0 35.0 41.0 32.0 41.0 22 36.99862224486146 39.0 35.0 41.0 32.0 41.0 23 36.88077978476771 39.0 35.0 41.0 31.0 41.0 24 36.830114676979505 38.0 35.0 41.0 31.0 41.0 25 36.84238234808051 38.0 35.0 41.0 31.0 41.0 26 36.753017317740586 38.0 35.0 41.0 31.0 41.0 27 36.681901276600804 38.0 35.0 41.0 31.0 41.0 28 36.6216726023853 38.0 35.0 41.0 31.0 41.0 29 36.6050426772718 38.0 35.0 41.0 31.0 41.0 30 36.513777338965575 38.0 35.0 41.0 31.0 41.0 31 36.34451907933839 38.0 35.0 41.0 30.0 41.0 32 36.14259829409868 38.0 35.0 41.0 30.0 41.0 33 35.9185828707183 38.0 35.0 41.0 29.0 41.0 34 35.67868906364906 38.0 35.0 41.0 27.0 41.0 35 35.531315996191736 38.0 35.0 41.0 27.0 41.0 36 35.41347481061708 38.0 35.0 41.0 25.0 41.0 37 35.30868300118658 38.0 34.0 40.0 25.0 41.0 38 35.17493369314423 38.0 34.0 40.0 24.0 41.0 39 35.10128093417151 38.0 34.0 40.0 24.0 41.0 40 34.95709204024591 38.0 34.0 40.0 23.0 41.0 41 34.83978955140751 38.0 34.0 40.0 23.0 41.0 42 34.8344144795565 38.0 34.0 40.0 23.0 41.0 43 34.79221302821913 38.0 34.0 40.0 23.0 41.0 44 34.6704722390624 38.0 34.0 40.0 23.0 41.0 45 34.58462658077541 38.0 34.0 40.0 23.0 41.0 46 34.54864775648529 38.0 34.0 40.0 23.0 41.0 47 34.49114103021078 38.0 34.0 40.0 23.0 41.0 48 34.357828032537626 37.0 33.0 40.0 23.0 41.0 49 34.23154060893973 37.0 33.0 40.0 23.0 41.0 50 34.1628168401358 37.0 33.0 40.0 22.0 41.0 51 33.885960704877036 36.0 33.0 40.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 2.0 11 2.0 12 8.0 13 10.0 14 18.0 15 67.0 16 208.0 17 489.0 18 1037.0 19 2066.0 20 3535.0 21 5760.0 22 8660.0 23 13300.0 24 20254.0 25 30982.0 26 42795.0 27 47905.0 28 48873.0 29 51515.0 30 57019.0 31 67656.0 32 82020.0 33 105476.0 34 165205.0 35 222337.0 36 170007.0 37 222485.0 38 357434.0 39 626617.0 40 86.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 28.78726534510366 24.868713912522956 29.87018173367734 16.473839008696046 2 33.739961569000975 24.597368797818365 28.61524775164211 13.047421881538549 3 27.88473589202954 24.67392491128285 34.12643824169045 13.314900954997155 4 24.39378561484288 26.70763254255088 34.25648167305271 14.642100169553524 5 22.69973732161512 31.138625618088657 32.40184397422243 13.759793086073795 6 21.721968758138335 38.86667213293744 29.15258500086455 10.258774108059676 7 86.7026874084736 2.53939432303706 9.422859519531793 1.3350587489575496 8 87.37512368145688 1.9074027892425491 9.12708612222893 1.5903874070716268 9 81.9854798288236 4.288119485315203 10.900664406802703 2.8257362790585043 10 32.534521411708326 30.44218590220445 21.03177418580534 15.991518500281881 11 31.015422105853908 19.83500075833886 29.64760821622981 19.50196891957742 12 31.35130037058767 20.769478156654543 29.638261742887867 18.240959729869928 13 25.269762586831924 25.29771703891829 31.611429717281926 17.821090656967858 14 19.26813715014982 28.69668952162625 33.0769567372991 18.958216590924827 15 18.198518244103543 26.16749135132586 38.72554038547405 16.908450019096545 16 22.454817236086395 24.157489775170585 36.26363682323567 17.12405616550735 17 21.936002997668904 23.513900117638112 32.15441733447927 22.395679550213714 18 22.220305723143017 24.348370251194968 34.360057591269374 19.07126643439264 19 23.70354855854015 25.572290935322826 31.172018018301245 19.552142487835777 20 23.93287702717572 26.865672909969245 30.933258108384255 18.26819195447078 21 22.841803716412702 25.63121620134683 33.43675347699429 18.090226605246176 22 21.74665194455502 22.697273251370426 34.080215682617556 21.475859121457 23 19.051766292283766 26.086771808827237 33.845321813946555 21.01614008494245 24 18.948190374067106 26.53799405139456 35.5767560005421 18.937059573996244 25 19.993083609726963 26.753812617654045 33.56785900759996 19.68524476501904 26 19.254074956167162 29.04934895440578 30.95959816962065 20.73697791980641 27 18.66397261653247 28.346451675121685 33.970734492607576 19.018841215738274 28 17.141856948826785 27.321525905237802 35.59306984492076 19.943547301014643 29 18.6248448804055 25.88896644573586 35.04753318953926 20.43865548431938 30 20.157326636726797 26.244472304487708 34.16284700375431 19.435354055031183 31 21.93485593048603 26.226416617349855 32.109936618165555 19.72879083399856 32 22.76486524722059 26.36368232356726 31.36200633096117 19.509446098250976 33 21.742658451399826 26.903568610973867 31.562870539873543 19.79090239775277 34 18.584315173277243 27.76913701037756 32.86819051001581 20.77835730632939 35 18.397428190408053 27.801934635013843 32.395428894792275 21.405208279785832 36 22.366747966823418 27.833330288648835 30.20155669761907 19.598365046908675 37 19.353784833137837 29.56569912257857 31.0853932040093 19.99512284027429 38 19.524697843386242 29.728370242698176 29.943466581472144 20.803465332443434 39 19.54313588625172 28.76542858465929 30.096281420612968 21.59515410847602 40 21.08594124721889 27.01878513689822 30.546611499815835 21.348662116067054 41 18.75688505834536 27.06857634942895 30.49614054376932 23.678398048456366 42 20.012158912138478 27.592531148184513 30.096238936643232 22.29907100303378 43 19.97787434856143 27.943958545841692 30.497839902558766 21.580327203038113 44 20.270333996224874 28.49935148220198 30.2268771435818 21.00343737799135 45 18.95056947637233 29.543225102588167 28.962809108053307 22.543396312986204 46 20.02932243591187 28.47645262251421 29.967597476282258 21.52662746529166 47 19.326297704718566 28.072005230626353 31.27737826324682 21.32431880140826 48 19.963812154578772 27.977138526205596 31.1698513358447 20.889197983370924 49 20.36715496325349 26.558598776716575 31.15273029604105 21.921515963988888 50 18.5180401804889 28.603182304237052 31.200439794054706 21.67833772121934 51 18.110703878658985 29.226082268508037 30.17963496923523 22.483578883597747 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1393.0 1 2611.0 2 3829.0 3 26952.5 4 50076.0 5 35351.0 6 20626.0 7 18558.0 8 16490.0 9 16645.5 10 16801.0 11 17026.0 12 17251.0 13 16563.0 14 15875.0 15 15107.0 16 14339.0 17 13655.5 18 12972.0 19 12915.5 20 12859.0 21 12785.0 22 12711.0 23 13539.0 24 14367.0 25 16304.5 26 22149.5 27 26057.0 28 30284.5 29 34512.0 30 41603.5 31 48695.0 32 56383.5 33 64072.0 34 68853.5 35 73635.0 36 81262.5 37 88890.0 38 98982.5 39 109075.0 40 123985.5 41 138896.0 42 155803.0 43 172710.0 44 181817.0 45 190924.0 46 194316.5 47 197709.0 48 192379.0 49 187049.0 50 176262.5 51 165476.0 52 154332.5 53 143189.0 54 132966.5 55 122744.0 56 116439.0 57 110134.0 58 97685.0 59 85236.0 60 73538.0 61 61840.0 62 52474.5 63 43109.0 64 35172.5 65 27236.0 66 21693.5 67 16151.0 68 12418.0 69 8685.0 70 6644.0 71 4603.0 72 3375.5 73 2148.0 74 1789.0 75 1236.5 76 1043.0 77 737.5 78 432.0 79 300.5 80 169.0 81 122.5 82 76.0 83 57.5 84 39.0 85 24.0 86 9.0 87 10.5 88 12.0 89 10.5 90 9.0 91 6.5 92 4.0 93 2.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2353829.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 24.320870093303576 #Duplication Level Percentage of deduplicated Percentage of total 1 75.73456884996251 18.41930610572294 2 7.544689588181219 3.66986830736911 3 2.865488503538512 2.09073520945245 4 1.6565872287920467 1.6115857115870855 5 1.0995175593843267 1.3370611863546207 6 0.8252045286280741 1.2041815284701523 7 0.6628910153115356 1.1285460388586979 8 0.5477807745378294 1.0658004045715013 9 0.47905623231900935 1.0485957954256278 >10 7.213062375533149 43.46873110933435 >50 1.2992967459532172 20.224747873803036 >100 0.06829945483217413 2.522341627308762 >500 0.002667857269838267 0.4618053981940504 >1k 7.114286052902045E-4 0.3360157674383087 >5k 0.0 0.0 >10k+ 1.7785715132255113E-4 1.4106779361094393 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 32612 1.3854872210343232 No Hit CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2746 0.11666098089538365 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.043885940737411255 0.0 2 0.0 0.0 0.0 0.13730819018713764 0.0 3 0.0 0.0 0.0 0.23587099997493446 0.0 4 0.0 0.0 0.0 0.36774124203584885 0.0 5 0.0 0.0 0.0 0.6915965433342864 0.0 6 0.0 0.0 0.0 1.1396749721411368 0.0 7 0.0 0.0 0.0 1.4387196351136808 0.0 8 0.0 0.0 0.0 1.9798804416123685 0.0 9 0.0 0.0 0.0 2.255898792987936 0.0 10 0.0 0.0 0.0 2.6569474672969022 0.0 11 0.0 0.0 0.0 3.0774537997450113 0.0 12 0.0 0.0 0.0 3.380024632205653 0.0 13 0.0 0.0 0.0 3.5225583506703333 0.0 14 0.0 0.0 0.0 3.61598060012006 0.0 15 0.0 0.0 0.0 3.7030302541093683 0.0 16 0.0 0.0 0.0 3.874283136115665 0.0 17 0.0 0.0 0.0 4.090866413830401 0.0 18 0.0 0.0 0.0 4.345515328428701 0.0 19 0.0 0.0 0.0 4.499307298873452 0.0 20 0.0 0.0 0.0 4.675615773278348 0.0 21 0.0 0.0 0.0 4.902140299911336 0.0 22 0.0 0.0 0.0 5.15870099314776 0.0 23 0.0 0.0 0.0 5.418830339842019 0.0 24 0.0 0.0 0.0 5.616040927357085 0.0 25 0.0 0.0 0.0 5.802375618619704 0.0 26 0.0 0.0 0.0 5.982422682361378 0.0 27 0.0 0.0 0.0 6.181927404242194 0.0 28 0.0 0.0 0.0 6.387719753643957 0.0 29 0.0 0.0 0.0 6.622995978042585 0.0 30 0.0 0.0 0.0 6.910739905065321 0.0 31 0.0 0.0 0.0 7.156722089837452 0.0 32 0.0 0.0 0.0 7.382694324863871 0.0 33 0.0 0.0 0.0 7.609771143103428 0.0 34 0.0 0.0 0.0 7.859491917212337 0.0 35 0.0 0.0 0.0 8.141033184653601 0.0 36 0.0 0.0 0.0 8.38242710069423 0.0 37 0.0 0.0 0.0 8.636226335897808 0.0 38 0.0 0.0 0.0 8.930385342350698 0.0 39 0.0 0.0 0.0 9.396264554476982 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGCGCG 30 2.1664764E-6 45.000004 1 CGACGTA 20 7.0347945E-4 45.0 16 CGTTTTT 14535 0.0 43.281734 1 TAACGCG 75 0.0 42.000004 1 CGACGGT 270 0.0 41.666668 28 ACGTGCG 55 6.184564E-11 40.909092 1 CGGTCTA 270 0.0 40.833336 31 TTTCGCG 100 0.0 40.5 1 CGAACGG 130 0.0 39.80769 2 ACGGGAT 1000 0.0 39.149998 5 ATTGCGG 455 0.0 38.571426 2 TACGGGA 805 0.0 38.291924 4 CGGGATA 420 0.0 38.035713 6 GCACCGA 810 0.0 37.777775 9 AGGGCGA 1855 0.0 37.72237 6 GACCGAT 915 0.0 37.62295 9 GGGCGAT 3650 0.0 37.602737 7 CGTTCCG 30 1.1402854E-4 37.500004 16 GGCGATT 970 0.0 37.345364 8 GCGGGAT 1320 0.0 37.159092 5 >>END_MODULE