##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547937_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1319299 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.38425178826028 31.0 31.0 33.0 30.0 34.0 2 31.787604629428206 31.0 31.0 34.0 30.0 34.0 3 31.902692263088202 31.0 31.0 34.0 30.0 34.0 4 35.675850584287566 37.0 35.0 37.0 33.0 37.0 5 35.579548684566575 37.0 35.0 37.0 33.0 37.0 6 35.631656660089945 37.0 35.0 37.0 33.0 37.0 7 35.93182970653355 37.0 35.0 37.0 35.0 37.0 8 35.92178952610439 37.0 35.0 37.0 35.0 37.0 9 37.675869533744816 39.0 37.0 39.0 35.0 39.0 10 37.19824164196289 39.0 37.0 39.0 33.0 39.0 11 36.991174100791405 39.0 37.0 39.0 33.0 39.0 12 36.28627020864868 38.0 35.0 39.0 32.0 39.0 13 36.00268779101629 38.0 35.0 39.0 32.0 39.0 14 36.9932638469369 39.0 35.0 41.0 31.0 41.0 15 37.243740046797576 39.0 35.0 41.0 32.0 41.0 16 37.36329065662901 39.0 35.0 41.0 32.0 41.0 17 37.31747920676056 39.0 35.0 41.0 32.0 41.0 18 37.223153356441564 39.0 35.0 41.0 32.0 41.0 19 37.16479812385214 39.0 35.0 41.0 32.0 41.0 20 37.015631786274376 38.0 35.0 41.0 32.0 41.0 21 36.87914339357492 38.0 35.0 41.0 32.0 41.0 22 36.805785496691804 38.0 35.0 41.0 31.0 41.0 23 36.70247229778845 38.0 35.0 40.0 31.0 41.0 24 36.65760832078248 38.0 35.0 40.0 31.0 41.0 25 36.65868692388913 38.0 35.0 40.0 31.0 41.0 26 36.558307100968015 38.0 35.0 40.0 31.0 41.0 27 36.483868327043375 38.0 35.0 40.0 31.0 41.0 28 36.4458549578223 38.0 35.0 40.0 31.0 41.0 29 36.48289963078877 38.0 35.0 40.0 31.0 41.0 30 36.41070219866763 38.0 35.0 40.0 31.0 41.0 31 36.247416999482304 38.0 35.0 40.0 30.0 41.0 32 36.06973248672212 38.0 35.0 40.0 30.0 41.0 33 35.9422556979123 38.0 35.0 40.0 30.0 41.0 34 35.80031592535126 38.0 35.0 40.0 29.0 41.0 35 35.729354755821085 38.0 35.0 40.0 29.0 41.0 36 35.60407155618249 38.0 35.0 40.0 29.0 41.0 37 35.484447422456924 38.0 34.0 40.0 28.0 41.0 38 35.390859085014085 38.0 34.0 40.0 27.0 41.0 39 35.34963643571321 38.0 34.0 40.0 27.0 41.0 40 35.169286113307145 38.0 34.0 40.0 26.0 41.0 41 35.105164939865794 37.0 34.0 40.0 26.0 41.0 42 35.09566216604424 37.0 34.0 40.0 26.0 41.0 43 35.00994467516461 37.0 34.0 40.0 26.0 41.0 44 34.86230035799315 37.0 34.0 40.0 26.0 41.0 45 34.7334031178679 37.0 34.0 40.0 25.0 41.0 46 34.671565733014276 37.0 34.0 40.0 25.0 41.0 47 34.61183173791536 37.0 34.0 40.0 25.0 41.0 48 34.503576520561296 36.0 34.0 40.0 24.0 41.0 49 34.386899406427204 36.0 34.0 40.0 24.0 41.0 50 34.25986755087361 36.0 33.0 40.0 24.0 41.0 51 33.93963006111579 35.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 4.0 12 7.0 13 6.0 14 15.0 15 34.0 16 79.0 17 238.0 18 531.0 19 1015.0 20 1815.0 21 2901.0 22 4513.0 23 6649.0 24 9941.0 25 14174.0 26 18273.0 27 21409.0 28 23987.0 29 27725.0 30 32539.0 31 39478.0 32 49110.0 33 64721.0 34 111694.0 35 164542.0 36 93476.0 37 120474.0 38 187203.0 39 322699.0 40 46.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.693119603668315 24.134331944464446 29.996990826188757 13.175557625678486 2 29.639376668973448 26.9642438901265 30.151163610371874 13.245215830528181 3 28.876850509247713 26.071042273207212 31.410468741354308 13.641638476190765 4 26.4617042838659 28.478153928715173 30.509308352390168 14.550833435028753 5 23.693491771008695 33.126986376856195 29.188000597286894 13.99152125484822 6 22.332693346997157 41.54789778511164 25.78899855150349 10.330410316387718 7 88.86984678984825 3.843707908518084 5.744869055460514 1.541576246173157 8 88.80087076545954 3.5920591162427926 5.463128525072785 2.143941593224887 9 83.6506356784929 6.923449498559463 7.048061129433131 2.3778536935145103 10 38.58731038225603 39.722761860654785 11.807710003570078 9.882217753519104 11 39.341043993817934 22.77717181624484 23.72206755254116 14.159716637396071 12 36.377652071289376 22.839553429510673 25.00517320182915 15.7776212973708 13 24.372791914493984 34.40607474120726 26.031703199956947 15.189430144341806 14 17.8085483275588 38.25379993466227 28.145325661582397 15.792326076196526 15 16.858119349745586 27.55091908657552 40.64294750469757 14.948014058981324 16 19.803092399827484 25.19823027228854 38.36522274329019 16.63345458459379 17 20.025407432280325 23.96196768132167 27.545764834203617 28.466860052194388 18 22.253029828719644 26.216574104884486 32.2450786364577 19.28531742993817 19 26.038146015421827 27.36597238381898 27.089007116658166 19.50687448410103 20 27.22695916543558 27.7765692235043 26.448288068133152 18.548183542926964 21 23.301541197257027 27.749130409406813 30.25371807300695 18.695610320329205 22 23.15972345920068 25.254017474431496 28.03367545946749 23.55258360690033 23 19.130841454439064 29.909368535866392 28.086279152792503 22.873510856902037 24 19.305707045938792 27.71350542977748 34.519544091218144 18.46124343306559 25 18.985233824932788 28.07536426541671 32.721619587371784 20.217782322278723 26 18.627847061204474 33.51999812021384 27.295253009363307 20.55690180921838 27 18.81923657942589 33.89375721500585 29.758985643133208 17.52802056243505 28 16.301535891408996 31.07703409158955 34.52932201115896 18.092108005842498 29 18.270763488792156 27.688188954891952 33.60132919072932 20.43971836558657 30 20.022148125633386 30.20566224942185 30.838574121560008 18.93361550338475 31 25.640359008837272 29.221579035533264 26.70069483869843 18.437367116931036 32 26.481184325918537 29.383028411300245 27.01002577884164 17.125761483939577 33 25.82265278757886 28.83963377520941 26.044437235228706 19.293276201983023 34 20.21429562214479 30.17420615038744 28.580556795692257 21.03094143177551 35 20.43782341986161 29.245758542983815 29.130697438563963 21.185720598590617 36 27.672271410802253 27.133879431425324 27.04390740840401 18.149941749368416 37 21.124703346246758 31.065209630265773 28.969930243257974 18.8401567802295 38 21.105526495510116 32.54046277606516 25.303058669793582 21.050952058631136 39 20.795816566221912 30.58033091816184 27.96621539165875 20.657637123957496 40 22.433201268249274 28.542278892047975 26.714490043576173 22.310029796126578 41 18.525595789885386 27.158816917165858 28.161319003501102 26.154268289447653 42 22.437521744502195 26.79642749672364 26.872073730064223 23.89397702870994 43 22.787404523159648 26.426230899894566 27.584194333505902 23.202170243439888 44 20.20717062621892 30.93695970360017 28.191410741613538 20.664458928567367 45 19.531660374183563 34.03868266405114 25.28395761688594 21.145699344879365 46 22.43835552062118 31.36877993540509 26.89193276126185 19.30093178271188 47 21.75473490088297 29.227188074879155 27.566988226323218 21.45108879791465 48 22.74139524095751 27.388181147715567 29.185499268929938 20.684924342396986 49 22.587980435064377 25.824017148500833 29.836147833053765 21.75185458338102 50 20.6574855282995 31.140173683145367 27.68720358311497 20.515137205440162 51 19.73608711899274 31.706838252738766 26.023896023570092 22.533178604698403 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1505.0 1 2099.0 2 2693.0 3 5982.0 4 9271.0 5 7178.5 6 5086.0 7 5247.0 8 5408.0 9 5824.5 10 6241.0 11 6683.0 12 7125.0 13 7237.5 14 7350.0 15 7088.0 16 6826.0 17 6584.5 18 6343.0 19 6185.5 20 6028.0 21 6312.0 22 6596.0 23 7854.0 24 9112.0 25 9398.5 26 11972.5 27 14260.0 28 17826.0 29 21392.0 30 24307.5 31 27223.0 32 31572.0 33 35921.0 34 39042.0 35 42163.0 36 44764.0 37 47365.0 38 52586.5 39 57808.0 40 72134.0 41 86460.0 42 100524.5 43 114589.0 44 115603.5 45 116618.0 46 115467.0 47 114316.0 48 113990.5 49 113665.0 50 109573.5 51 105482.0 52 95532.5 53 85583.0 54 76542.0 55 67501.0 56 59031.5 57 50562.0 58 45377.0 59 40192.0 60 34939.5 61 29687.0 62 25819.5 63 21952.0 64 18255.5 65 14559.0 66 12539.5 67 10520.0 68 7975.5 69 5431.0 70 4201.0 71 2971.0 72 2327.5 73 1684.0 74 1291.5 75 689.5 76 480.0 77 434.0 78 388.0 79 275.0 80 162.0 81 137.5 82 113.0 83 73.5 84 34.0 85 24.0 86 14.0 87 14.5 88 15.0 89 11.5 90 8.0 91 8.5 92 9.0 93 6.5 94 4.0 95 2.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1319299.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 21.610115705756368 #Duplication Level Percentage of deduplicated Percentage of total 1 77.72620519332496 16.796722875971138 2 8.27281369420098 3.575529222876979 3 2.716889203420231 1.7613687013689432 4 1.4091061394806614 1.2180378686347506 5 0.8439399460935146 0.9118819941895321 6 0.5775265538746431 0.7488249391426666 7 0.435959506597535 0.6594794766418033 8 0.34182942568290187 0.5909578752511805 9 0.2817042098545194 0.5478894512779353 >10 4.644670452986592 27.110498100819115 >50 2.469898969175683 37.031480761572475 >100 0.27447276406666266 7.796813621730974 >500 0.00355995802939892 0.4786653348305768 >1k 0.001067987408819676 0.3572680512621663 >5k 3.55995802939892E-4 0.4145817244297618 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5389 0.4084745004733574 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 2515 0.19063153993143328 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 7.579782899858182E-5 0.0 0.0 0.07314490498363146 0.0 2 7.579782899858182E-5 0.0 0.0 0.2418708723344746 0.0 3 7.579782899858182E-5 0.0 0.0 0.37914074065090625 0.0 4 7.579782899858182E-5 0.0 0.0 0.6173733171934489 0.0 5 7.579782899858182E-5 0.0 0.0 0.9921177837624374 0.0 6 7.579782899858182E-5 0.0 0.0 1.3889194185700133 0.0 7 7.579782899858182E-5 0.0 0.0 1.586524358769316 0.0 8 7.579782899858182E-5 0.0 0.0 2.0800440233790822 0.0 9 7.579782899858182E-5 0.0 0.0 2.2283045769003085 0.0 10 7.579782899858182E-5 0.0 0.0 2.547640830471334 0.0 11 7.579782899858182E-5 0.0 0.0 3.0225142291474487 0.0 12 7.579782899858182E-5 0.0 0.0 3.4146163985571127 0.0 13 7.579782899858182E-5 0.0 0.0 3.579628272287025 0.0 14 7.579782899858182E-5 0.0 0.0 3.6448144052258056 0.0 15 7.579782899858182E-5 0.0 0.0 3.762376838002606 0.0 16 1.5159565799716365E-4 0.0 0.0 4.0192556804788 0.0 17 1.5159565799716365E-4 0.0 0.0 4.322522794302126 0.0 18 1.5159565799716365E-4 0.0 0.0 4.742291171296272 0.0 19 1.5159565799716365E-4 0.0 0.0 4.943079620313515 0.0 20 1.5159565799716365E-4 0.0 0.0 5.1586486459854815 0.0 21 1.5159565799716365E-4 0.0 0.0 5.421212325636569 0.0 22 1.5159565799716365E-4 0.0 0.0 5.703862429972281 0.0 23 1.5159565799716365E-4 0.0 0.0 5.997654815170784 0.0 24 1.5159565799716365E-4 0.0 0.0 6.215800967028702 0.0 25 1.5159565799716365E-4 0.0 0.0 6.413026918083013 0.0 26 1.5159565799716365E-4 0.0 0.0 6.604264840646434 0.0 27 1.5159565799716365E-4 0.0 0.0 6.806114459269658 0.0 28 1.5159565799716365E-4 0.0 0.0 7.005765940851922 0.0 29 1.5159565799716365E-4 0.0 0.0 7.239071658509557 0.0 30 1.5159565799716365E-4 0.0 0.0 7.5277855891651555 0.0 31 2.2739348699574546E-4 0.0 0.0 7.800202986586058 0.0 32 2.2739348699574546E-4 0.0 0.0 8.043893006816498 0.0 33 2.2739348699574546E-4 0.0 0.0 8.279700052831087 0.0 34 2.2739348699574546E-4 0.0 0.0 8.5355177257013 0.0 35 2.2739348699574546E-4 0.0 0.0 8.820214371419974 0.0 36 2.2739348699574546E-4 0.0 0.0 9.087856505613967 0.0 37 2.2739348699574546E-4 0.0 0.0 9.353982683227986 0.0 38 2.2739348699574546E-4 0.0 0.0 9.616470565050076 0.0 39 2.2739348699574546E-4 0.0 0.0 9.997809442741941 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGGTAC 90 0.0 45.0 6 AGCCGTA 20 7.0336665E-4 45.0 22 ACTATCG 20 7.0336665E-4 45.0 24 CACGCTA 25 3.8911203E-5 45.0 44 TAGTTCG 25 3.8911203E-5 45.0 1 ATATCGT 20 7.0336665E-4 45.0 20 CCGGTAA 20 7.0336665E-4 45.0 29 GCGTGAT 20 7.0336665E-4 45.0 44 ATCGGTT 20 7.0336665E-4 45.0 28 CGATACG 45 3.8562575E-10 45.0 10 AACGTAC 30 2.165747E-6 44.999996 1 ACACCGT 30 2.165747E-6 44.999996 13 TTCGCAA 30 2.165747E-6 44.999996 14 TAATGCG 30 2.165747E-6 44.999996 1 GCGTAAG 105 0.0 42.857147 1 TTCGTAG 100 0.0 42.75 1 TCTAGCG 65 0.0 41.53846 1 GTCGGAT 55 6.184564E-11 40.909092 9 CGTAAGG 215 0.0 40.813953 2 TTGTACG 50 1.0822987E-9 40.5 1 >>END_MODULE