##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547936_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2874165 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.26075503668022 31.0 31.0 33.0 30.0 34.0 2 31.65137352935548 31.0 31.0 34.0 30.0 34.0 3 31.797158479071314 31.0 31.0 34.0 30.0 34.0 4 35.58110338132988 37.0 35.0 37.0 33.0 37.0 5 35.48104579938869 37.0 35.0 37.0 33.0 37.0 6 35.52054179213789 37.0 35.0 37.0 33.0 37.0 7 35.86143036325333 37.0 35.0 37.0 35.0 37.0 8 35.859330970908076 37.0 35.0 37.0 35.0 37.0 9 37.590861693744095 39.0 37.0 39.0 35.0 39.0 10 36.97339818695169 39.0 37.0 39.0 33.0 39.0 11 36.82693060419287 39.0 37.0 39.0 32.0 39.0 12 36.39936712053762 38.0 35.0 39.0 32.0 39.0 13 36.24099903798147 38.0 35.0 39.0 32.0 39.0 14 37.22479815876959 39.0 35.0 41.0 32.0 41.0 15 37.40357216791659 39.0 35.0 41.0 32.0 41.0 16 37.49108140973117 39.0 35.0 41.0 32.0 41.0 17 37.42684292655432 39.0 35.0 41.0 32.0 41.0 18 37.355227692216694 39.0 36.0 41.0 32.0 41.0 19 37.31844135601123 39.0 36.0 41.0 32.0 41.0 20 37.1784532203266 39.0 35.0 41.0 32.0 41.0 21 37.06499626848145 39.0 35.0 41.0 31.0 41.0 22 37.004193913710594 39.0 35.0 41.0 31.0 41.0 23 36.861104703453 39.0 35.0 41.0 31.0 41.0 24 36.83422907174779 39.0 35.0 41.0 31.0 41.0 25 36.859278085983235 39.0 35.0 41.0 31.0 41.0 26 36.75813531930143 39.0 35.0 41.0 31.0 41.0 27 36.69531742262535 39.0 35.0 41.0 31.0 41.0 28 36.632386797556855 38.0 35.0 41.0 31.0 41.0 29 36.62886125187663 38.0 35.0 41.0 31.0 41.0 30 36.536468156838595 38.0 35.0 41.0 30.0 41.0 31 36.41881137652153 38.0 35.0 40.0 30.0 41.0 32 36.325260379971226 38.0 35.0 41.0 30.0 41.0 33 36.24103557033086 38.0 35.0 41.0 30.0 41.0 34 36.09844493966074 38.0 35.0 41.0 30.0 41.0 35 36.055197596519335 38.0 35.0 41.0 29.0 41.0 36 35.94848242880976 38.0 35.0 40.0 29.0 41.0 37 35.853620790734006 38.0 35.0 40.0 29.0 41.0 38 35.70174746404608 38.0 35.0 40.0 27.0 41.0 39 35.584062849558045 38.0 35.0 40.0 27.0 41.0 40 35.371312015837646 38.0 34.0 40.0 26.0 41.0 41 35.24182780042204 38.0 34.0 40.0 25.0 41.0 42 35.167019290820114 38.0 34.0 40.0 25.0 41.0 43 35.05862467881976 38.0 34.0 40.0 24.0 41.0 44 34.90265068289399 38.0 34.0 40.0 24.0 41.0 45 34.755854308990614 38.0 34.0 40.0 24.0 41.0 46 34.61420969220626 38.0 34.0 40.0 23.0 41.0 47 34.51662865562694 37.0 33.0 40.0 23.0 41.0 48 34.393988514925205 37.0 33.0 40.0 23.0 41.0 49 34.221962552602236 37.0 33.0 40.0 23.0 41.0 50 34.11248797476832 37.0 33.0 40.0 23.0 41.0 51 33.78779715152053 36.0 33.0 40.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 2.0 11 4.0 12 4.0 13 15.0 14 34.0 15 80.0 16 199.0 17 507.0 18 990.0 19 2093.0 20 3683.0 21 6047.0 22 9639.0 23 14635.0 24 21243.0 25 30804.0 26 40293.0 27 48103.0 28 54460.0 29 63755.0 30 75926.0 31 90593.0 32 110217.0 33 138480.0 34 211037.0 35 278209.0 36 215983.0 37 281056.0 38 435098.0 39 740857.0 40 118.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.52434533160066 24.45131020661653 29.435436030986388 12.588908430796423 2 29.57846887704777 26.384080245914898 30.035923476905467 14.001527400131863 3 28.615789281408688 25.685303383765373 31.330316805054686 14.368590529771256 4 25.576019470002592 28.72879601553843 30.15842862187801 15.536755892580976 5 23.078702858047468 32.646838299123395 29.532090189672477 14.742368653156657 6 21.914434279173257 40.85896251606989 26.15163012561909 11.074973079137768 7 88.9741542326206 3.0978040578742 6.044746909102296 1.8832948004028995 8 88.52240563781133 2.6663744078715035 5.981389377436577 2.82983057688059 9 82.68944197706116 5.860902209859211 8.187108255789074 3.2625475572905525 10 32.866554286201385 39.47014176291201 16.672737995209044 10.990565955677562 11 32.600877124312625 23.219613348572544 27.345820438283813 16.833689088831015 12 31.036283581492363 22.287794889994135 28.40257953179445 18.273341996719047 13 24.56421256260514 28.343501503915054 29.73712365156489 17.35516228191492 14 18.514629466297166 31.83578534983204 30.456497800230675 19.19308738364012 15 17.185165082728375 27.772309522939704 37.230221646982685 17.81230374734923 16 21.35267112361329 26.712558256050016 34.24636372650839 17.688406893828297 17 20.930565920884845 25.868869741298777 28.470425323528747 24.730139014287627 18 21.619705201336735 26.208029114542832 32.207336739540004 19.964928944580425 19 23.795432760471304 27.973411408182898 27.74764148891939 20.48351434242641 20 24.728260207747294 28.048146157231752 27.619117204475042 19.604476430545915 21 23.055252569007 27.71431006918531 30.705718008534653 18.524719353273035 22 22.341793181671896 23.65375683024461 30.224813119636483 23.77963686844701 23 18.928454003162656 28.40271870264929 30.283299671382817 22.38552762280523 24 19.53297740387208 26.977957076229096 33.11156457614646 20.37750094375236 25 19.866048052216907 28.604586027594102 30.023746027107002 21.505619893081988 26 18.935029826053828 31.001490867782465 27.619569509753266 22.443909796410434 27 19.251608728100162 30.026529444203792 29.831759832855802 20.89010199484024 28 16.943877613150253 28.88926001116846 32.59687596223599 21.569986413445296 29 18.3681173488648 26.840317100792753 31.51085619649533 23.28070935384712 30 20.138161866141992 28.006777620630686 30.55148190865869 21.30357860456863 31 22.300146303361153 28.142886716663796 27.744649315540336 21.812317664434712 32 22.829204308033813 27.637696513596122 27.71298794606433 21.82011123230573 33 21.96902404698408 26.786527565397257 28.086661691308606 23.15778669631006 34 18.068621669250025 27.703037229943305 29.607346829426984 24.620994271379686 35 18.145130846698084 27.26753683243655 30.028790970594937 24.558541350270428 36 22.132967313985105 26.873996447663927 28.721489545659345 22.271546692691615 37 18.732292683266273 29.718370378875257 28.77079082098627 22.778546116872207 38 19.044418117957736 29.726894593734183 27.885420635210572 23.34326665309751 39 19.27885142293501 27.646638241019566 27.642463115374376 25.432047220671045 40 21.37650413250457 25.75172267423756 28.94611130537043 23.92566188788744 41 18.15041933918199 25.579116021522776 29.562951326733156 26.70751331256208 42 19.930901670572148 26.55240739484337 28.792153547204148 24.724537387380334 43 20.392635774216163 26.197904434853253 29.30635506312268 24.103104727807903 44 19.945584195757725 27.983953600436994 28.14139062997427 23.92907157383101 45 18.836218519117725 28.89604459034189 26.879424111002674 25.38831277953771 46 20.62310270983051 27.84471316017 28.450871818423785 23.08131231157571 47 19.479466210186263 27.205605802032938 29.5149373818135 23.7999906059673 48 19.406923402101132 26.694570423062004 30.443589703444307 23.45491647139256 49 20.325868556606874 25.151548362741877 30.390983120314946 24.131599960336306 50 18.890390774364032 27.21642633599671 29.850756654541406 24.042426235097846 51 17.935017648604028 27.654153467180905 28.508140625190272 25.9026882590248 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1553.0 1 2724.5 2 3896.0 3 11585.5 4 19275.0 5 14341.5 6 9408.0 7 9002.5 8 8597.0 9 9208.5 10 9820.0 11 10385.0 12 10950.0 13 10965.5 14 10981.0 15 10531.0 16 10081.0 17 10062.0 18 10043.0 19 9674.0 20 9305.0 21 11412.0 22 13519.0 23 14854.5 24 16190.0 25 19408.0 26 28996.5 27 35367.0 28 42829.5 29 50292.0 30 56695.0 31 63098.0 32 70548.5 33 77999.0 34 87511.5 35 97024.0 36 105325.5 37 113627.0 38 123491.5 39 133356.0 40 152784.0 41 172212.0 42 190874.5 43 209537.0 44 217349.0 45 225161.0 46 228325.0 47 231489.0 48 243530.0 49 255571.0 50 257955.5 51 260340.0 52 237329.5 53 214319.0 54 189069.0 55 163819.0 56 146350.5 57 128882.0 58 111913.0 59 94944.0 60 81239.0 61 67534.0 62 56923.0 63 46312.0 64 39111.5 65 31911.0 66 25588.0 67 19265.0 68 15494.0 69 11723.0 70 8790.5 71 5858.0 72 4818.0 73 3778.0 74 2877.5 75 1673.5 76 1370.0 77 959.5 78 549.0 79 431.0 80 313.0 81 218.0 82 123.0 83 98.5 84 74.0 85 59.0 86 44.0 87 29.0 88 14.0 89 13.0 90 12.0 91 8.5 92 5.0 93 4.5 94 4.0 95 11.0 96 18.0 97 9.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2874165.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 24.215901007221458 #Duplication Level Percentage of deduplicated Percentage of total 1 77.68630911768393 18.812439712102396 2 8.981461449713828 4.349883627328916 3 3.220582582243507 2.3396792699157123 4 1.5697914541405227 1.5205565782179649 5 0.9174236369871459 1.1108119987482898 6 0.6372343219229795 0.9258721954854456 7 0.44470149717050056 0.753819320327081 8 0.3490118855536169 0.6761309816728073 9 0.27085898313836415 0.5903184890335762 >10 3.5892412976692163 22.243582151263027 >50 1.9867666830886075 34.37080545485877 >100 0.3418318836871414 10.806005557304774 >500 0.003190138000382715 0.5408346912674268 >1k 0.0014500627274466886 0.5524225011699233 >5k 0.0 0.0 >10k+ 1.4500627274466885E-4 0.40683747130401293 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 11586 0.403108381042842 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.4792713709894876E-5 0.0 0.0 0.151243926496913 0.0 2 3.4792713709894876E-5 0.0 0.0 0.4832360007167299 0.0 3 3.4792713709894876E-5 0.0 0.0 0.7337087467142631 0.0 4 3.4792713709894876E-5 0.0 0.0 1.1381044581643711 0.0 5 3.4792713709894876E-5 0.0 0.0 1.93941544761696 0.0 6 3.4792713709894876E-5 0.0 0.0 2.736620896851781 0.0 7 3.4792713709894876E-5 0.0 0.0 3.195154070834486 0.0 8 6.958542741978975E-5 0.0 0.0 4.290637454704235 0.0 9 6.958542741978975E-5 0.0 0.0 4.634598222440257 0.0 10 6.958542741978975E-5 0.0 0.0 5.294337659807283 0.0 11 6.958542741978975E-5 0.0 0.0 6.102572399288141 0.0 12 6.958542741978975E-5 0.0 0.0 6.776437678421385 0.0 13 6.958542741978975E-5 0.0 0.0 7.045420148112583 0.0 14 6.958542741978975E-5 0.0 0.0 7.157800613395542 0.0 15 6.958542741978975E-5 0.0 0.0 7.342619508622504 0.0 16 6.958542741978975E-5 0.0 0.0 7.728923008943467 0.0 17 6.958542741978975E-5 0.0 0.0 8.19114421057942 0.0 18 6.958542741978975E-5 0.0 0.0 8.748071178933708 0.0 19 6.958542741978975E-5 0.0 0.0 9.045896808290408 0.0 20 6.958542741978975E-5 0.0 0.0 9.390449052159497 0.0 21 6.958542741978975E-5 0.0 0.0 9.813424072730689 0.0 22 6.958542741978975E-5 0.0 0.0 10.265311838394803 0.0 23 6.958542741978975E-5 0.0 0.0 10.730733969692068 0.0 24 6.958542741978975E-5 0.0 0.0 11.072572381891785 0.0 25 6.958542741978975E-5 0.0 0.0 11.366918739877494 0.0 26 6.958542741978975E-5 0.0 0.0 11.655315543818814 0.0 27 6.958542741978975E-5 0.0 0.0 11.966362404385274 0.0 28 6.958542741978975E-5 0.0 0.0 12.283845916988064 0.0 29 6.958542741978975E-5 0.0 0.0 12.638070535268504 0.0 30 6.958542741978975E-5 0.0 0.0 13.05975822543243 0.0 31 6.958542741978975E-5 0.0 0.0 13.417914420362088 0.0 32 6.958542741978975E-5 0.0 0.0 13.7417997922875 0.0 33 6.958542741978975E-5 0.0 0.0 14.070590936846006 0.0 34 6.958542741978975E-5 0.0 0.0 14.417265536251398 0.0 35 6.958542741978975E-5 0.0 0.0 14.804438854415109 0.0 36 6.958542741978975E-5 0.0 0.0 15.142658824388997 0.0 37 6.958542741978975E-5 0.0 0.0 15.498240358504122 0.0 38 6.958542741978975E-5 0.0 0.0 15.886979348784777 0.0 39 6.958542741978975E-5 0.0 0.0 16.393839602110525 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGCGCGA 20 7.035055E-4 45.000004 12 CGACGGT 730 0.0 43.150684 28 CGGTCTA 765 0.0 41.176468 31 TACGGGA 1515 0.0 40.9901 4 ACGGGAT 1500 0.0 39.899998 5 CGTTTTT 6495 0.0 39.769054 1 ATTGGGA 3080 0.0 39.59416 4 GCGATCG 40 3.4606455E-7 39.375004 9 TAGGGTA 1650 0.0 39.272728 5 GCGTAAG 155 0.0 39.193546 1 AGGGCGA 2085 0.0 38.848923 6 CGAGGGA 2065 0.0 38.680386 4 TTACGCA 35 6.2515646E-6 38.571426 15 CGTTTAG 35 6.2515646E-6 38.571426 30 TCACGAC 835 0.0 38.532936 25 ACGGTCT 825 0.0 38.454544 30 GACGGTC 820 0.0 38.414635 29 CTAACGG 235 0.0 38.29787 2 GGGCGAT 3880 0.0 38.273197 7 CACGACG 830 0.0 38.222893 26 >>END_MODULE