##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547935_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2038923 Sequences flagged as poor quality 0 Sequence length 51 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.274208981898777 31.0 31.0 33.0 30.0 34.0 2 31.62569405514578 31.0 31.0 34.0 30.0 34.0 3 31.48347632549145 31.0 31.0 34.0 30.0 34.0 4 35.43544263319409 37.0 35.0 37.0 33.0 37.0 5 35.44094406703931 37.0 35.0 37.0 33.0 37.0 6 35.52008683015494 37.0 35.0 37.0 33.0 37.0 7 35.87460291536267 37.0 35.0 37.0 35.0 37.0 8 35.88846366439537 37.0 35.0 37.0 35.0 37.0 9 37.631692319915956 39.0 37.0 39.0 35.0 39.0 10 37.08684633995497 39.0 37.0 39.0 33.0 39.0 11 36.90880577638293 39.0 37.0 39.0 33.0 39.0 12 36.59157800466227 39.0 35.0 39.0 32.0 39.0 13 36.520048084209165 39.0 35.0 39.0 32.0 39.0 14 37.62991343959531 40.0 36.0 41.0 32.0 41.0 15 37.7529921434012 40.0 36.0 41.0 33.0 41.0 16 37.78448769276721 40.0 36.0 41.0 33.0 41.0 17 37.70973548289955 40.0 36.0 41.0 32.0 41.0 18 37.53599081475858 39.0 36.0 41.0 32.0 41.0 19 37.39237234559618 39.0 36.0 41.0 32.0 41.0 20 37.16743300261952 39.0 35.0 41.0 32.0 41.0 21 37.06664695037527 39.0 35.0 41.0 32.0 41.0 22 37.00259646882202 39.0 35.0 41.0 32.0 41.0 23 36.858581712011684 38.0 35.0 41.0 31.0 41.0 24 36.82432293912031 38.0 35.0 41.0 31.0 41.0 25 36.82856831768537 38.0 35.0 41.0 31.0 41.0 26 36.731713752799884 38.0 35.0 41.0 31.0 41.0 27 36.64971065606695 38.0 35.0 41.0 31.0 41.0 28 36.55842177463298 38.0 35.0 40.0 31.0 41.0 29 36.51612003003547 38.0 35.0 40.0 31.0 41.0 30 36.38184080517018 38.0 35.0 40.0 30.0 41.0 31 36.208104965219384 38.0 35.0 40.0 30.0 41.0 32 35.92208239349892 38.0 35.0 40.0 29.0 41.0 33 35.63753756272307 38.0 35.0 40.0 27.0 41.0 34 35.35931911111896 38.0 34.0 40.0 25.0 41.0 35 35.145100624202094 38.0 34.0 40.0 24.0 41.0 36 35.01281902259183 38.0 34.0 40.0 24.0 41.0 37 34.90805439930787 38.0 34.0 40.0 23.0 41.0 38 34.776667387635534 38.0 34.0 40.0 23.0 41.0 39 34.71420205667404 38.0 34.0 40.0 23.0 41.0 40 34.56877724171045 38.0 34.0 40.0 22.0 41.0 41 34.44984239228259 38.0 34.0 40.0 21.0 41.0 42 34.42116450694803 38.0 33.0 40.0 22.0 41.0 43 34.34669087552595 38.0 33.0 40.0 21.0 41.0 44 34.19775930724211 38.0 33.0 40.0 21.0 41.0 45 34.091314385094485 37.0 33.0 40.0 20.0 41.0 46 34.03233864152791 37.0 33.0 40.0 20.0 41.0 47 33.95311446288065 37.0 33.0 40.0 20.0 41.0 48 33.79403243771344 37.0 33.0 40.0 20.0 41.0 49 33.64578848735337 37.0 33.0 40.0 19.0 41.0 50 33.55223125149895 37.0 33.0 40.0 19.0 41.0 51 33.2709405897133 36.0 32.0 40.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 3.0 12 1.0 13 12.0 14 27.0 15 44.0 16 113.0 17 362.0 18 849.0 19 1630.0 20 3105.0 21 5074.0 22 7982.0 23 12249.0 24 19598.0 25 30413.0 26 41931.0 27 46457.0 28 46750.0 29 48112.0 30 53076.0 31 61191.0 32 73591.0 33 92236.0 34 137782.0 35 188842.0 36 161377.0 37 196857.0 38 301114.0 39 508086.0 40 58.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.606060160192417 24.00536950144758 27.20911971663471 18.179450621725294 2 34.97807420878571 24.439471230644806 27.65847459663754 12.92397996393194 3 27.242029247794058 24.485868274574372 35.36298330049737 12.909119177134205 4 24.143236404709743 26.548673000402662 35.007207236369396 14.300883358518199 5 21.946880779705758 30.831277100704636 33.35148016869691 13.8703619508927 6 20.05426394228718 38.3883550286107 30.77590473009525 10.781476299006878 7 82.66064976460612 2.8771562241438247 12.332785495087357 2.1294085161627 8 82.70042566590303 2.4036709576575475 12.286731769664671 2.609171606774753 9 77.0934459025672 5.20009828718397 14.41054909871535 3.295906711533491 10 31.692810370965457 35.2852461814399 22.192059239117906 10.829884208476729 11 27.53394806964265 23.112986611068685 32.45384940971287 16.89921590957579 12 26.27965842751296 22.22408595125956 33.174573046652576 18.32168257457491 13 22.063363844539495 26.024916095409196 34.71832923558173 17.193390824469585 14 17.42091290352799 29.322343217473147 34.96046687393296 18.29627700506591 15 16.490961159396406 27.26993613785317 39.55701122602472 16.682091476725702 16 20.178447150775188 26.74034281824277 37.100322081804954 15.980887949177088 17 19.61290347894452 26.75083855545305 32.74110890896812 20.89514905663431 18 20.43387611989271 26.752996557496285 35.02476552572118 17.78836179688983 19 21.04787674669421 28.96087787523119 31.806644978746135 18.184600399328467 20 22.17209772021798 28.580873333617795 31.6111005663284 17.635928379835825 21 20.903290609797427 28.530699786112567 33.361779723903254 17.204229880186745 22 20.44309667407744 24.682835006520598 33.79622477160736 21.077843547794593 23 17.41061334832164 28.575331192006757 33.71981188107643 20.294243578595168 24 17.825587332135644 27.48235220260893 36.2343747164557 18.457685748799733 25 18.828764009234288 28.575968783519535 33.49925426315756 19.09601294408862 26 18.215302882943593 30.759572578268035 31.532676810257183 19.49244772853119 27 17.99150826195987 29.32101898894662 33.23617419588675 19.451298553206765 28 17.073670756570994 29.407142888672105 34.51263240446059 19.006553950296308 29 17.78968602541636 28.361198534716614 33.78415957836564 20.064955861501392 30 19.00900622534544 28.926006524032537 32.94641337608139 19.11857387454063 31 20.557863146376786 28.539920340297304 30.810334671785057 20.091881841540854 32 20.496212951641628 30.061360826279365 30.684827234770513 18.757598987308498 33 19.718988897569943 29.575614184547433 30.13801894431521 20.567377973567417 34 16.85272077464426 30.51409984584999 32.16139108735347 20.47178829215228 35 16.999317777081334 30.54749983201916 30.69444015296311 21.758742237936403 36 19.574353715172176 29.96542782635735 29.699257892524635 20.760960565945847 37 17.7325480167716 31.1656202809032 29.62309022949861 21.478741472826584 38 17.285792548320853 31.214616736384848 29.408221889693724 22.091368825600576 39 17.65481089771414 29.588120787298 29.6042077116203 23.15286060336756 40 20.21322041097187 28.140788053300685 29.89862785401901 21.747363681708432 41 17.516747812448042 27.89340254634432 30.127719389108858 24.46213025209878 42 19.145009399570263 29.17040025542897 29.06004787821806 22.624542466782707 43 19.141281941495585 28.733257705170818 30.25048027806837 21.874980075265228 44 19.39705422911998 30.151751684590344 29.437600144782316 21.013593941507356 45 18.206768965772614 30.66702371791382 28.93414807719566 22.192059239117906 46 19.785445551401402 29.8726827839992 28.951853503050383 21.390018161549012 47 18.856376626287506 29.15328337558603 30.049638951544516 21.940701046581946 48 18.921558097093417 28.548552348470245 30.7670274944174 21.762862060018943 49 19.562582794936347 27.215740859267367 30.640195828876323 22.581480516919964 50 17.751136261644014 29.12934917110651 31.494274182987787 21.62524038426169 51 17.495707292526497 28.751502631536358 30.80057461708951 22.952215458847636 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1199.0 1 2009.0 2 2819.0 3 30429.0 4 58039.0 5 40152.5 6 22266.0 7 20110.0 8 17954.0 9 18812.5 10 19671.0 11 20604.5 12 21538.0 13 21425.5 14 21313.0 15 20437.5 16 19562.0 17 18393.5 18 17225.0 19 16460.5 20 15696.0 21 15677.5 22 15659.0 23 16337.0 24 17015.0 25 18998.0 26 23517.0 27 26053.0 28 30408.0 29 34763.0 30 40503.5 31 46244.0 32 49678.5 33 53113.0 34 59888.5 35 66664.0 36 71656.0 37 76648.0 38 82561.5 39 88475.0 40 98945.5 41 109416.0 42 122015.0 43 134614.0 44 143366.5 45 152119.0 46 163927.0 47 175735.0 48 180021.5 49 184308.0 50 172428.5 51 160549.0 52 141416.5 53 122284.0 54 107707.0 55 93130.0 56 83082.0 57 73034.0 58 65758.0 59 58482.0 60 49885.5 61 41289.0 62 35035.5 63 28782.0 64 23610.5 65 18439.0 66 14601.0 67 10763.0 68 8035.5 69 5308.0 70 4185.0 71 3062.0 72 2444.5 73 1827.0 74 1638.5 75 1099.0 76 748.0 77 532.5 78 317.0 79 254.5 80 192.0 81 141.5 82 91.0 83 72.0 84 53.0 85 35.0 86 17.0 87 12.0 88 7.0 89 6.5 90 6.0 91 3.5 92 1.0 93 1.0 94 1.0 95 1.0 96 1.0 97 1.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2038923.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 30.08808463172194 #Duplication Level Percentage of deduplicated Percentage of total 1 73.9612807724874 22.25353275353149 2 8.152898044460276 4.90610172711042 3 3.389148326143384 3.059189449993826 4 2.0337840803167317 2.4477067012487437 5 1.390363709363772 2.0916690478106004 6 1.053428651962849 1.9017390260243374 7 0.8225538288968418 1.7324348452596567 8 0.7302737363240459 1.757803038627335 9 0.6087668649937834 1.64849660594289 >10 7.610900803864153 48.885635996847114 >50 0.2064859010386394 3.8909669816470136 >100 0.03646857600135579 1.8712660004462625 >500 0.001989111352804355 0.4336027500033231 >1k 0.0014918335146032664 1.087348419090459 >5k 0.0 0.0 >10k+ 1.6575927940036295E-4 2.032506656416543 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 40753 1.9987513015449825 No Hit CGTTTCTGTCTCTTATACACATCTGACGCACAATCCCTCGTATGCCGTCTT 3988 0.1955934579187149 No Hit CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3228 0.1583188771719187 No Hit CGTTCTGTCTCTTATACACATCTGACGCACAATCCCTCGTATGCCGTCTTC 3202 0.15704369414637043 No Hit CGCTGTCTCTTATACACATCTGACGCACAATCCCTCGTATGCCGTCTTCTG 2590 0.12702784754500293 No Hit CTGTCTCTTATACACATCTGACGCACAATCCCTCGTATGCCGTCTTCTGCT 2418 0.11859202137599115 TruSeq Adapter, Index 13 (95% over 22bp) CGTTTTCTGTCTCTTATACACATCTGACGCACAATCCCTCGTATGCCGTCT 2400 0.11770920235830387 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.14679318444100145 0.0 2 0.0 0.0 0.0 0.362004842752767 0.0 3 0.0 0.0 0.0 0.6474496584716539 0.0 4 0.0 0.0 0.0 0.916317094858413 0.0 5 0.0 0.0 0.0 1.6495473345486809 0.0 6 0.0 0.0 0.0 2.873624948073076 0.0 7 0.0 0.0 0.0 3.6780692551901177 0.0 8 0.0 0.0 0.0 5.010341243882187 0.0 9 0.0 0.0 0.0 5.814883642001194 0.0 10 0.0 0.0 0.0 6.732426874384172 0.0 11 0.0 0.0 0.0 7.4845886774537345 0.0 12 0.0 0.0 0.0 8.05660635541411 0.0 13 0.0 0.0 0.0 8.378393887361122 0.0 14 0.0 0.0 0.0 8.609496287991258 0.0 15 0.0 0.0 0.0 8.794054508188882 0.0 16 0.0 0.0 0.0 9.065668492630667 0.0 17 0.0 0.0 0.0 9.391919165167101 0.0 18 0.0 0.0 0.0 9.78702972108314 0.0 19 0.0 0.0 0.0 10.019701577744721 0.0 20 0.0 0.0 0.0 10.282487372009635 0.0 21 0.0 0.0 0.0 10.569501643759965 0.0 22 0.0 0.0 0.0 10.889180219164725 0.0 23 0.0 0.0 0.0 11.222493443842657 0.0 24 0.0 0.0 0.0 11.488025786162597 0.0 25 0.0 0.0 0.0 11.725994556930301 0.0 26 0.0 0.0 0.0 11.962246735163614 0.0 27 0.0 0.0 0.0 12.216400521255585 0.0 28 0.0 0.0 0.0 12.476537858467436 0.0 29 0.0 0.0 0.0 12.752713074500607 0.0 30 0.0 0.0 0.0 13.085830117174606 0.0 31 0.0 0.0 0.0 13.369313112854188 0.0 32 0.0 0.0 0.0 13.659073932659545 0.0 33 0.0 0.0 0.0 13.931178372111159 0.0 34 0.0 0.0 0.0 14.207255497142365 0.0 35 0.0 0.0 0.0 14.512612786260197 0.0 36 0.0 0.0 0.0 14.789033229798282 0.0 37 0.0 0.0 0.0 15.083796690703867 0.0 38 0.0 0.0 0.0 15.38709406878043 0.0 39 0.0 0.0 0.0 15.782253670197452 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGATAT 20 7.034572E-4 45.0 31 CGTTTTT 17080 0.0 43.48507 1 GCGCGAC 165 0.0 42.272728 9 CGCCGGT 205 0.0 41.70732 28 CGACGGT 265 0.0 41.603775 28 CGGTCTA 265 0.0 40.75472 31 ACGCTAG 50 1.0822987E-9 40.5 1 CGAGGGT 265 0.0 39.905663 4 GGGCGAT 2635 0.0 39.705883 7 GTAAGCG 125 0.0 39.6 1 CGTTAGG 290 0.0 39.568966 2 CACGACG 280 0.0 39.375 26 CGGTTTT 1180 0.0 39.279663 1 TACGGGA 870 0.0 39.051723 4 TATGGGA 2440 0.0 38.913937 4 GGCGATC 320 0.0 38.671875 8 TATAGCG 105 0.0 38.57143 1 GCACCGA 600 0.0 38.250004 9 ACGGGAT 940 0.0 38.05851 5 TCACGAC 290 0.0 38.01724 25 >>END_MODULE