##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547934_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2662733 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.326287314574913 31.0 31.0 33.0 30.0 34.0 2 31.718017540624615 31.0 31.0 34.0 30.0 34.0 3 31.84325052493059 31.0 31.0 34.0 30.0 34.0 4 35.63065091392941 37.0 35.0 37.0 33.0 37.0 5 35.54106588982072 37.0 35.0 37.0 33.0 37.0 6 35.59351425771942 37.0 35.0 37.0 33.0 37.0 7 35.90228047648788 37.0 35.0 37.0 35.0 37.0 8 35.91011791268595 37.0 35.0 37.0 35.0 37.0 9 37.67838795703512 39.0 37.0 39.0 35.0 39.0 10 37.09465913405512 39.0 37.0 39.0 33.0 39.0 11 36.91267768867551 39.0 37.0 39.0 33.0 39.0 12 36.41191137076079 38.0 35.0 39.0 32.0 39.0 13 36.24528707910256 39.0 35.0 39.0 32.0 39.0 14 37.27342884172014 39.0 35.0 41.0 32.0 41.0 15 37.4315761287369 39.0 35.0 41.0 32.0 41.0 16 37.49488439133777 39.0 35.0 41.0 32.0 41.0 17 37.42761666303005 39.0 35.0 41.0 32.0 41.0 18 37.348182487692156 39.0 35.0 41.0 32.0 41.0 19 37.309053517570106 39.0 35.0 41.0 32.0 41.0 20 37.18646706222516 39.0 35.0 41.0 32.0 41.0 21 37.086093874226215 39.0 35.0 41.0 32.0 41.0 22 37.00686550247434 39.0 35.0 41.0 31.0 41.0 23 36.888900238965 39.0 35.0 41.0 31.0 41.0 24 36.84291891075823 38.0 35.0 41.0 31.0 41.0 25 36.871439607350794 39.0 35.0 41.0 31.0 41.0 26 36.77908074147877 39.0 35.0 41.0 31.0 41.0 27 36.71242554172724 39.0 35.0 41.0 31.0 41.0 28 36.65291488106393 38.0 35.0 41.0 31.0 41.0 29 36.63334401158509 38.0 35.0 41.0 31.0 41.0 30 36.545422691648014 38.0 35.0 41.0 30.0 41.0 31 36.40349332809561 38.0 35.0 40.0 30.0 41.0 32 36.29358933096184 38.0 35.0 41.0 30.0 41.0 33 36.1522623560079 38.0 35.0 41.0 30.0 41.0 34 36.0103604078967 38.0 35.0 41.0 29.0 41.0 35 35.924044205708945 38.0 35.0 41.0 29.0 41.0 36 35.83861318427345 38.0 35.0 40.0 29.0 41.0 37 35.76868127596721 38.0 35.0 40.0 29.0 41.0 38 35.664452650716385 38.0 35.0 40.0 28.0 41.0 39 35.6024618315092 38.0 35.0 40.0 27.0 41.0 40 35.44742751150791 38.0 34.0 40.0 27.0 41.0 41 35.334682072892775 38.0 34.0 40.0 26.0 41.0 42 35.315185563103775 38.0 34.0 40.0 26.0 41.0 43 35.2358572939908 38.0 34.0 40.0 26.0 41.0 44 35.10931287515496 38.0 34.0 40.0 26.0 41.0 45 34.96959665126019 38.0 34.0 40.0 25.0 41.0 46 34.88512667248275 37.0 34.0 40.0 25.0 41.0 47 34.82132680971017 37.0 34.0 40.0 25.0 41.0 48 34.67554276001387 37.0 34.0 40.0 24.0 41.0 49 34.53595084448948 37.0 34.0 40.0 24.0 41.0 50 34.4361665251454 37.0 33.0 40.0 24.0 41.0 51 34.12863400123106 36.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 2.0 11 5.0 12 5.0 13 8.0 14 20.0 15 57.0 16 177.0 17 412.0 18 973.0 19 1923.0 20 3437.0 21 5558.0 22 8849.0 23 13144.0 24 19548.0 25 28037.0 26 36612.0 27 42910.0 28 48016.0 29 55189.0 30 65559.0 31 78951.0 32 97982.0 33 125519.0 34 202414.0 35 272004.0 36 195935.0 37 257388.0 38 405884.0 39 696094.0 40 120.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.09843683163126 24.791520591812997 29.112457013151527 12.997585563404215 2 29.907842806620117 25.819411859919867 30.534792635987163 13.73795269747286 3 28.850545661168432 25.978646751289 31.243650790372147 13.927156797170426 4 25.962347708163 28.071534021623645 31.219803112065687 14.746315158147663 5 22.76796058786217 32.586744521512294 30.43827526079408 14.207019629831455 6 21.29004297464297 42.06749230959319 26.56935562071 10.073109095053841 7 89.6204388498584 3.1096621403648057 5.651186206052203 1.6187128037245941 8 90.26646682187062 2.328622509279 5.431074013053506 1.9738366557968825 9 84.97093024347541 5.250582765902552 7.079380471117457 2.6991065195045842 10 36.47688296197929 36.612495507435405 14.347439266347772 12.563182264237533 11 34.54822545106851 23.2405577277181 24.639008116848366 17.57220870436503 12 33.29304890877155 22.551829267147703 26.136229205106183 18.018892618974565 13 25.860159467734846 27.808758895465672 27.55323196129691 18.777849675502576 14 20.062882759931245 31.743212706643888 28.26937586307001 19.924528670354857 15 18.402370797222254 27.29162105250508 36.12138355591792 18.184624594354748 16 22.346664122914316 24.92258893400127 34.60189211610778 18.128854826976646 17 22.571658517771027 24.806467640578308 27.896525862713233 24.72534797893743 18 22.937635880127676 26.512909856151555 31.082538129057625 19.466916134663144 19 24.77728709562694 28.208836560030615 26.68975822960845 20.324118114733995 20 26.241684765239327 27.84146964791438 26.251974944540063 19.66487064230623 21 23.849293188614855 28.017304025600765 29.432767010436265 18.70063577534811 22 22.99216631934182 24.450254681937693 29.044031076341486 23.513547922379 23 21.272129049363944 28.144654383297162 28.46868236507378 22.114534202265116 24 21.296953168042005 27.295601924789302 31.518631421175158 19.888813485993527 25 21.321439288129902 27.61606214366968 29.682773300965586 21.379725267234832 26 20.457815334845815 29.933718476467597 27.07511417780153 22.533352010885057 27 19.620292383802656 30.39651365720859 29.485983010688642 20.49721094830011 28 17.731330929537435 28.88648617792321 31.94413409080069 21.438048801738667 29 20.082449122762213 27.11556134242524 30.969571489142922 21.83241804566962 30 21.702964585634383 28.151414355100567 30.26450643004762 19.881114629217425 31 24.13182245459834 27.61178082819419 27.186278158568662 21.07011855863881 32 25.505373614252726 27.3224915904073 27.023625725898913 20.148509069441058 33 23.85590293882263 28.12377358150442 26.865217053305756 21.155106426367194 34 19.690934089148254 27.847929176526527 29.812301871798635 22.648834862526584 35 20.40414866980655 27.386110436157136 29.185802707218482 23.02393818681783 36 23.833031700887773 27.929537058353205 27.449691726508064 20.787739514250962 37 20.162367011638043 30.208623996472795 28.728190171526773 20.90081882036239 38 20.498900941250962 30.547411250020183 26.170404618112293 22.783283190616558 39 20.001179239525705 29.419697731616353 27.460657902989148 23.1184651258688 40 22.21356778918502 26.89567448181999 28.107324316782794 22.78343341221219 41 19.00971670835942 25.842433319450354 28.78726481400877 26.36058515818146 42 21.079019188179966 27.29424993042862 26.72911628766384 24.89761459372757 43 20.40854265147876 27.157510723005274 27.897840301675007 24.536106323840954 44 21.263904417003133 27.90948247533643 27.61024105683897 23.21637205082147 45 20.21772366962816 30.26938863190564 26.0127846088962 23.50010308957 46 21.27994057233677 29.33850295917766 27.728728340393122 21.65282812809245 47 20.873328268361867 27.439251325611693 28.425568767127608 23.261851638898833 48 20.49086408588469 27.60671084934164 29.121470308889403 22.780954755884274 49 21.166936377023156 25.617326258396915 29.67150668129324 23.54423068328668 50 20.192373775365386 28.205681906522358 28.74148478274014 22.860459535372115 51 19.41249836164572 28.63847032353601 27.790131417607398 24.158899897210873 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1656.0 1 2633.5 2 3611.0 3 11898.5 4 20186.0 5 14841.0 6 9496.0 7 9088.0 8 8680.0 9 9297.0 10 9914.0 11 10272.0 12 10630.0 13 10817.0 14 11004.0 15 10551.0 16 10098.0 17 9894.5 18 9691.0 19 9537.0 20 9383.0 21 9535.0 22 9687.0 23 11160.5 24 12634.0 25 15461.0 26 21954.0 27 25620.0 28 30502.0 29 35384.0 30 43542.5 31 51701.0 32 58208.5 33 64716.0 34 75083.0 35 85450.0 36 90424.0 37 95398.0 38 103132.0 39 110866.0 40 129695.0 41 148524.0 42 168769.0 43 189014.0 44 200496.0 45 211978.0 46 218464.5 47 224951.0 48 235910.0 49 246869.0 50 234839.0 51 222809.0 52 204165.0 53 185521.0 54 167759.0 55 149997.0 56 139406.0 57 128815.0 58 115864.0 59 102913.0 60 94252.0 61 85591.0 62 73936.5 63 62282.0 64 50263.0 65 38244.0 66 30506.5 67 22769.0 68 18035.0 69 13301.0 70 10129.0 71 6957.0 72 5365.5 73 3774.0 74 2893.0 75 1542.5 76 1073.0 77 829.5 78 586.0 79 488.0 80 390.0 81 264.5 82 139.0 83 99.5 84 60.0 85 49.0 86 38.0 87 27.5 88 17.0 89 12.5 90 8.0 91 6.0 92 4.0 93 3.0 94 2.0 95 1.5 96 1.0 97 0.5 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2662733.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 22.27895306710059 #Duplication Level Percentage of deduplicated Percentage of total 1 76.35261283984399 17.010562780093863 2 9.212453274681408 4.104876282789685 3 3.2834282243553448 2.1945402992881844 4 1.6210140909888773 1.444579874169997 5 0.9428666553819601 1.0503040981894398 6 0.6662727106848357 0.8906315070742408 7 0.47226982477953067 0.7365174082889688 8 0.39678466730917505 0.7071957584580986 9 0.3101595166440603 0.6219026383164861 >10 4.2077268384179565 23.9126754182376 >50 2.0976226702221323 33.28872010213026 >100 0.43011380548656497 12.237843601303101 >500 0.004449920802763444 0.6707554977039145 >1k 0.0020538096012754354 0.6561896060477894 >5k 0.0 0.0 >10k+ 1.7115080010628628E-4 0.47270512790832975 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 12397 0.4655742802601687 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.1266619672344166E-4 0.0 0.0 0.10451667516044605 0.0 2 1.1266619672344166E-4 0.0 0.0 0.30010519267234076 0.0 3 1.1266619672344166E-4 0.0 0.0 0.4731604708395472 0.0 4 1.1266619672344166E-4 0.0 0.0 0.7047270605051277 0.0 5 1.1266619672344166E-4 0.0 0.0 1.1796901904922499 0.0 6 1.1266619672344166E-4 0.0 0.0 1.6656194969604539 0.0 7 1.1266619672344166E-4 0.0 0.0 1.9466841023865329 0.0 8 1.1266619672344166E-4 0.0 0.0 2.6205030695905296 0.0 9 1.1266619672344166E-4 0.0 0.0 2.8562383085348775 0.0 10 1.1266619672344166E-4 0.0 0.0 3.3243288005218696 0.0 11 1.1266619672344166E-4 0.0 0.0 3.9465466496265305 0.0 12 1.1266619672344166E-4 0.0 0.0 4.443930352761617 0.0 13 1.1266619672344166E-4 0.0 0.0 4.658259014328511 0.0 14 1.1266619672344166E-4 0.0 0.0 4.757893487630942 0.0 15 1.1266619672344166E-4 0.0 0.0 4.902481773426025 0.0 16 1.1266619672344166E-4 0.0 0.0 5.213553142579448 0.0 17 1.1266619672344166E-4 0.0 0.0 5.585276480968989 0.0 18 1.1266619672344166E-4 0.0 0.0 6.022571545851575 0.0 19 1.1266619672344166E-4 0.0 0.0 6.271188286621302 0.0 20 1.1266619672344166E-4 0.0 0.0 6.5536048864080625 0.0 21 1.1266619672344166E-4 0.0 0.0 6.909292069463968 0.0 22 1.1266619672344166E-4 0.0 0.0 7.302947760815673 0.0 23 1.1266619672344166E-4 0.0 0.0 7.708020293435354 0.0 24 1.1266619672344166E-4 0.0 0.0 8.006961268741552 0.0 25 1.1266619672344166E-4 0.0 0.0 8.274355708965187 0.0 26 1.1266619672344166E-4 0.0 0.0 8.522183786357852 0.0 27 1.1266619672344166E-4 0.0 0.0 8.802422173007958 0.0 28 1.1266619672344166E-4 0.0 0.0 9.080632568117043 0.0 29 1.1266619672344166E-4 0.0 0.0 9.398651686068412 0.0 30 1.1266619672344166E-4 0.0 0.0 9.729927859834238 0.0 31 1.1266619672344166E-4 0.0 0.0 10.040060344014964 0.0 32 1.1266619672344166E-4 0.0 0.0 10.327847365845543 0.0 33 1.1266619672344166E-4 0.0 0.0 10.621455474506831 0.0 34 1.1266619672344166E-4 0.0 0.0 10.940901697616697 0.0 35 1.1266619672344166E-4 0.0 0.0 11.29441066753595 0.0 36 1.1266619672344166E-4 0.0 0.0 11.60413004232869 0.0 37 1.1266619672344166E-4 0.0 0.0 11.930937123624487 0.0 38 1.1266619672344166E-4 0.0 0.0 12.267621274833038 0.0 39 1.5022159563125555E-4 0.0 0.0 12.697818369322047 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTTAGCG 75 0.0 45.0 1 CGACGGT 1035 0.0 42.608696 28 CGGTCTA 1050 0.0 41.571426 31 CGTTTTT 6895 0.0 41.50834 1 TACGGGA 1190 0.0 41.02941 4 CTCACGA 1130 0.0 40.22124 24 ACGGTCT 1110 0.0 39.72973 30 CACGACG 1125 0.0 39.6 26 CGTAAGG 410 0.0 39.512196 2 TTAGGGA 4175 0.0 39.341316 4 TCTCACG 1170 0.0 38.846153 23 ATAGGGC 1165 0.0 38.62661 4 GTAGGGT 1750 0.0 38.571426 4 TCACGAC 1180 0.0 38.51695 25 TAAGGGA 3710 0.0 38.51078 4 ACGACGG 1160 0.0 38.40517 27 TTGCGAG 170 0.0 38.38235 1 GCGCGAC 525 0.0 38.142853 9 TAGGGAT 4575 0.0 38.01639 5 TAGGGCG 995 0.0 37.989952 5 >>END_MODULE