##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547929_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1767315 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.428916746590165 31.0 31.0 33.0 30.0 34.0 2 31.804241462331277 31.0 31.0 34.0 30.0 34.0 3 31.729183535476132 31.0 31.0 34.0 30.0 34.0 4 35.628986343690855 37.0 35.0 37.0 33.0 37.0 5 35.63110877234675 37.0 35.0 37.0 33.0 37.0 6 35.71608230564444 37.0 35.0 37.0 33.0 37.0 7 35.98802250872085 37.0 35.0 37.0 35.0 37.0 8 36.008435394935255 37.0 35.0 37.0 35.0 37.0 9 37.79089522807196 39.0 38.0 39.0 35.0 39.0 10 37.30023849738162 39.0 37.0 39.0 34.0 39.0 11 37.10111100737559 39.0 37.0 39.0 33.0 39.0 12 36.773713231653666 39.0 35.0 39.0 33.0 39.0 13 36.685982408342596 39.0 35.0 39.0 33.0 39.0 14 37.816425481592134 40.0 36.0 41.0 33.0 41.0 15 37.945042621151295 40.0 36.0 41.0 33.0 41.0 16 37.990059497033634 40.0 36.0 41.0 33.0 41.0 17 37.9195565023779 40.0 36.0 41.0 33.0 41.0 18 37.756981070154445 39.0 36.0 41.0 33.0 41.0 19 37.64241971578355 39.0 36.0 41.0 33.0 41.0 20 37.42886582188235 39.0 35.0 41.0 33.0 41.0 21 37.315794298130214 39.0 35.0 41.0 32.0 41.0 22 37.257564158058976 39.0 35.0 41.0 32.0 41.0 23 37.09965059992135 39.0 35.0 41.0 32.0 41.0 24 37.0579342109358 39.0 35.0 41.0 32.0 41.0 25 37.082342423393676 39.0 35.0 41.0 32.0 41.0 26 36.99245861660202 39.0 35.0 41.0 32.0 41.0 27 36.92890118626278 39.0 35.0 41.0 32.0 41.0 28 36.862748293315 39.0 35.0 41.0 32.0 41.0 29 36.83697360119729 39.0 35.0 41.0 31.0 41.0 30 36.733340123294376 38.0 35.0 41.0 31.0 41.0 31 36.574831877735434 38.0 35.0 41.0 31.0 41.0 32 36.33636505093885 38.0 35.0 41.0 30.0 41.0 33 36.09823432721388 38.0 35.0 41.0 30.0 41.0 34 35.84151438764454 38.0 35.0 41.0 29.0 41.0 35 35.64120997105779 38.0 35.0 41.0 27.0 41.0 36 35.523070307217445 38.0 35.0 41.0 26.0 41.0 37 35.401471158225895 38.0 35.0 41.0 25.0 41.0 38 35.27586593221921 38.0 35.0 40.0 25.0 41.0 39 35.19907034116725 38.0 35.0 40.0 24.0 41.0 40 35.07962134650586 38.0 34.0 40.0 24.0 41.0 41 34.98165465692307 38.0 34.0 40.0 24.0 41.0 42 34.95578773450121 38.0 34.0 40.0 23.0 41.0 43 34.88336997083146 38.0 34.0 40.0 23.0 41.0 44 34.743018646930516 38.0 34.0 40.0 23.0 41.0 45 34.630948642432166 38.0 34.0 40.0 23.0 41.0 46 34.562625225271105 38.0 34.0 40.0 23.0 41.0 47 34.504518436158804 38.0 34.0 40.0 23.0 41.0 48 34.360150284471075 37.0 34.0 40.0 23.0 41.0 49 34.21501373552536 37.0 33.0 40.0 22.0 41.0 50 34.118795460911045 37.0 33.0 40.0 22.0 41.0 51 33.83214424140575 37.0 33.0 40.0 21.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 0.0 9 1.0 10 3.0 11 1.0 12 1.0 13 5.0 14 11.0 15 34.0 16 84.0 17 221.0 18 546.0 19 1106.0 20 2013.0 21 3466.0 22 5680.0 23 8891.0 24 14544.0 25 22945.0 26 30951.0 27 34241.0 28 34043.0 29 35030.0 30 39221.0 31 46596.0 32 57964.0 33 75078.0 34 119598.0 35 166700.0 36 139144.0 37 175593.0 38 277275.0 39 476256.0 40 72.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.628212853962083 24.20813493915912 28.50963184265397 16.654020364224827 2 33.92355069696121 25.326045441814276 28.527908154460295 12.222495706764215 3 27.590780364564328 24.626113624339744 34.877030976368104 12.90607503472782 4 24.274676557376583 26.89831750423665 34.55507365693156 14.271932281455202 5 22.41258632445263 31.292780291006412 32.69015427357319 13.604479110967768 6 20.66926382676546 39.98228951828055 28.95024373130993 10.398202923644059 7 85.66079052121438 3.1032385285022763 9.71066278507227 1.525308165211069 8 86.27624390671726 2.5447076497398595 9.482803009084401 1.6962454344584865 9 81.1181934176986 5.570766954391266 10.789474428723798 2.5215651991863366 10 34.37615818345909 38.53608439921576 16.870506955466343 10.217250461858809 11 28.793452214234588 24.940488820612057 30.08858070010157 16.177478265051786 12 27.685726653143327 22.513586994961283 31.470847019348557 18.32983933254683 13 22.750613218356662 27.408469910570552 32.2918664754161 17.54905039565669 14 17.87559093879699 31.149002865929393 32.519443336360524 18.455962858913097 15 17.227093076220143 27.705247791140795 37.90241128491525 17.16524784772381 16 20.718208129280857 26.49058034362861 35.827059692245015 16.964151834845513 17 20.53578450926971 25.64285370746019 31.495573794145354 22.325787989124745 18 21.125039961749888 26.285919601202956 34.145808755088936 18.443231681958224 19 23.00274710507182 27.308600900235668 30.77561159159516 18.91304040309735 20 24.263869202717117 27.640743161236113 30.587020423636986 17.508367212409787 21 22.636541872841004 27.11220127707851 32.90330246730209 17.347954382778397 22 22.367998913606232 24.300874490399277 32.20274823673199 21.1283783592625 23 19.00793010866767 28.66342446026883 31.866814914149433 20.461830516914077 24 18.714943289679542 27.86605670183301 34.72120137044047 18.69779863804698 25 19.36960870020342 28.823328042822023 32.78826921063874 19.018794046335827 26 19.18011220410623 30.475155815460177 30.64054794985614 19.70418403057746 27 18.680597403405734 29.98429821508899 32.367857456084515 18.967246925420767 28 17.71110413254004 28.77760897180186 34.74785196753267 18.763434928125434 29 18.53274600170315 27.00146832907546 34.70869652552035 19.757089143701037 30 20.012335095894056 27.2726141067099 33.69337101761712 19.02167977977893 31 22.40987034003559 27.58619714086057 30.96929523033528 19.034637288768554 32 22.921493904595387 27.09449079535906 31.555212285302847 18.428803014742705 33 22.579506200083177 27.64249723450545 30.359273813666494 19.41872275174488 34 20.5566636394757 27.538610830553694 31.88175282844315 20.022972701527458 35 20.261130585096602 27.873582241988554 31.491047153450292 20.374240019464555 36 23.56173064790374 27.787179987721487 29.63404939130828 19.01703997306649 37 21.1390159648959 29.510868181393807 30.41896888783267 18.931146965877616 38 20.615170470459425 30.230264553857122 29.225859566630735 19.928705409052718 39 20.87929995501651 29.01933158491837 29.776921488246295 20.324446971818833 40 22.022616228572723 27.646514628122322 29.84753708308932 20.483332060215638 41 19.74560279293731 27.649456944574112 30.225058917057794 22.37988134543078 42 20.765341775518227 28.133071919833192 29.084232295883872 22.01735400876471 43 20.923887365862907 27.87058334252807 30.114891799141635 21.090637492467387 44 20.793803028888455 29.03896588893321 29.454058840670733 20.713172241507596 45 19.884853577319266 30.411556513694503 28.187448191182668 21.51614171780356 46 21.494187510432493 29.036985483629117 28.87063143808546 20.59819556785293 47 20.523845494436475 28.812124607101737 29.929582445687387 20.734447452774408 48 20.898990842040043 27.862039308216136 30.82206624172827 20.41690360801555 49 21.312952133603797 26.987548908938138 30.462085140453173 21.237413817004892 50 20.040513434220838 28.85716468201764 30.39661859940079 20.705703284360737 51 19.475192594415823 28.94967790122304 29.263543850417157 22.31158565394398 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1094.0 1 1712.0 2 2330.0 3 18648.5 4 34967.0 5 25204.5 6 15442.0 7 14517.5 8 13593.0 9 14524.5 10 15456.0 11 16031.0 12 16606.0 13 16443.0 14 16280.0 15 15706.5 16 15133.0 17 13758.5 18 12384.0 19 12135.5 20 11887.0 21 11718.5 22 11550.0 23 12390.0 24 13230.0 25 14346.0 26 18964.0 27 22466.0 28 26543.0 29 30620.0 30 35122.5 31 39625.0 32 44736.0 33 49847.0 34 54934.5 35 60022.0 36 64930.0 37 69838.0 38 75152.5 39 80467.0 40 90531.0 41 100595.0 42 109621.0 43 118647.0 44 122784.0 45 126921.0 46 129576.5 47 132232.0 48 135333.5 49 138435.0 50 138182.5 51 137930.0 52 127693.0 53 117456.0 54 105365.5 55 93275.0 56 84047.5 57 74820.0 58 66387.0 59 57954.0 60 50367.5 61 42781.0 62 36532.5 63 30284.0 64 25217.0 65 20150.0 66 15562.0 67 10974.0 68 8801.5 69 6629.0 70 5305.0 71 3981.0 72 3243.0 73 2505.0 74 2087.5 75 1334.5 76 999.0 77 701.0 78 403.0 79 300.5 80 198.0 81 142.5 82 87.0 83 65.5 84 44.0 85 35.5 86 27.0 87 16.5 88 6.0 89 6.5 90 7.0 91 4.5 92 2.0 93 2.5 94 3.0 95 2.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1767315.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 26.97400005181026 #Duplication Level Percentage of deduplicated Percentage of total 1 74.80988555235596 20.179218567651695 2 7.8651570377406905 4.243094926870264 3 3.0825480779783603 2.494459560452877 4 1.851576678193579 1.9977771765409706 5 1.2638165997039308 1.7045094512946248 6 0.9172412482771317 1.4844999287129916 7 0.716145008428096 1.3522106846110187 8 0.5834546390195599 1.2590484370514035 9 0.5162076629011408 1.2531766973256204 >10 7.683510185390227 49.281227544787704 >50 0.6707095229450836 11.098222686786709 >100 0.03698457520330687 1.6239443258786714 >500 0.0017004380694780555 0.3359229568853061 >1k 8.502190347390278E-4 0.3626408435397783 >5k 0.0 0.0 >10k+ 2.1255475868475694E-4 1.3300462116103995 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 23198 1.31261263555167 No Hit CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2076 0.11746632603695437 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 1834 0.10377323793438067 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.06603237113927059 0.0 2 0.0 0.0 0.0 0.18610151557588772 0.0 3 0.0 0.0 0.0 0.31635560157640263 0.0 4 0.0 0.0 0.0 0.4587184514362182 0.0 5 0.0 0.0 0.0 0.8188693017373813 0.0 6 0.0 0.0 0.0 1.324042403306711 0.0 7 0.0 0.0 0.0 1.6486591241516084 0.0 8 0.0 0.0 0.0 2.253078822960253 0.0 9 0.0 0.0 0.0 2.6075713723925844 0.0 10 0.0 0.0 0.0 3.1283048013512023 0.0 11 0.0 0.0 0.0 3.6803286341144617 0.0 12 0.0 0.0 0.0 4.099212647434102 0.0 13 0.0 0.0 0.0 4.312756922223826 0.0 14 0.0 0.0 0.0 4.432486568608312 0.0 15 0.0 0.0 0.0 4.560986581339489 0.0 16 0.0 0.0 0.0 4.781547149206565 0.0 17 0.0 0.0 0.0 5.048562367206752 0.0 18 0.0 0.0 0.0 5.359372833931698 0.0 19 0.0 0.0 0.0 5.548869330028886 0.0 20 0.0 0.0 0.0 5.759244956332063 0.0 21 0.0 0.0 0.0 5.99927007918792 0.0 22 0.0 0.0 0.0 6.271321184961368 0.0 23 0.0 0.0 0.0 6.5591589501588565 0.0 24 0.0 0.0 0.0 6.7711754837139955 0.0 25 0.0 0.0 0.0 6.972497828627041 0.0 26 0.0 0.0 0.0 7.157807182081293 0.0 27 0.0 0.0 0.0 7.35064207569109 0.0 28 0.0 0.0 0.0 7.557170057403463 0.0 29 0.0 0.0 0.0 7.78270993003511 0.0 30 0.0 0.0 0.0 8.071113525319483 0.0 31 0.0 0.0 0.0 8.310629401097145 0.0 32 1.6974902606496295E-4 0.0 0.0 8.548278037588092 0.0 33 2.2633203475328392E-4 0.0 0.0 8.772007253941714 0.0 34 2.2633203475328392E-4 0.0 0.0 9.006091160885298 0.0 35 2.2633203475328392E-4 0.0 0.0 9.262751688295522 0.0 36 2.2633203475328392E-4 0.0 0.0 9.515111907045434 0.0 37 2.2633203475328392E-4 0.0 0.0 9.75887150847472 0.0 38 2.2633203475328392E-4 0.0 0.0 10.023227325066555 0.0 39 2.2633203475328392E-4 0.0 0.0 10.348579625024401 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 11850 0.0 43.15823 1 CGCGAGG 215 0.0 40.813953 2 GCGCGAC 95 0.0 40.263157 9 CGACGGT 210 0.0 39.642857 28 TACGGGA 860 0.0 39.244186 4 AGGGCGA 1290 0.0 39.244183 6 CGCCGGT 145 0.0 38.793102 28 TTAGGGA 2795 0.0 38.64043 4 CGGTTTT 950 0.0 38.605263 1 GGGCGAT 2495 0.0 38.597195 7 CGAGGGA 1445 0.0 38.46021 4 TAAGGGA 2675 0.0 38.27103 4 GCGATGA 265 0.0 38.207546 9 TATGGGA 2445 0.0 37.82209 4 CGGGATC 625 0.0 37.800003 6 TAGGGTA 820 0.0 37.591465 5 AGGGATT 3425 0.0 37.51095 6 GTAATCG 30 1.1401701E-4 37.500004 1 CGTTTCG 30 1.1401701E-4 37.500004 42 ATAGGGA 2705 0.0 37.264328 4 >>END_MODULE